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Dear experts,
I think this as a silly, but basic question..

I analyzed a disease group (n=10) vs. control group (n=30) on FSL-FIRST.
With FSL-FIRST volumetric analysis, I found volume of caudate and thalamus are smaller in disease group with statistical significance.
In vertex shape analysis, I imagined that this would show region of focal atrophy in each structure, but I found only "global" displacement (in case of caudate nucleus, upward and laterally) in visualization of the outcome *_mni1.vtk file , whose vectors (arrows) are mainly aligned in one ways in every part of the structure.

My pictures  and vtk files are here : 

http://doremifafa.egloos.com/1035750

In this respect, I think that region of higher F statistics cannot be told to have more severe atrophy.

Thanks in advance,
Cho