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Hi - see recent posts - it sounds like you have SGE_ROOT set but do not have a local cluster setup!
Steve.


On 22 Jan 2013, at 12:20, Bertram Walter wrote:

Hi all,

running feeds v5.0.2 on my new fsl 5.0.2 installation I got FDT errors:

Starting FDT (bedpost) at Di 22. Jan 11:09:04 CET 2013
checking error on bedpost output:
No output image created
Warning - test failed!
No output image created
Warning - test failed!
No output image created
Warning - test failed!
No output image created
Warning - test failed!
No output image created
Warning - test failed!
No output image created
Warning - test failed!
No output image created
Warning - test failed!

All other tests passed.

Then I checked for possible problems in the RUN script and started from the terminal

bedpostx fdt_subj1 -n 1

Then I got the output:

subjectdir is /home/walter/Dokumente/feeds/results/fdt_subj1
Making bedpostx directory structure
Queuing preprocessing stages
Queuing parallel processing stage
/bin/sh: 1: queue:: not found
Queuing post processing stage
0 slices processed
/bin/sh: 1: queue:: not found

What was going wrong?

Best regards

Bertram


--
Dr. Bertram Walter
Bender Institute of Neuroimaging
University of Giessen
Otto-Behaghel-Str. 10H
35394 Giessen
Germany
Phone +49 (641) 99-26307
  or +49 (641) 99-26331 (Secretary)
Fax   +49 (641) 99-26309
www.bion.de



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Stephen M. Smith, Professor of Biomedical Engineering
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