-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Hi Nat! How recent is recent? From today's 'phenix-online.org': "New Phenix version 1.8.1 now available", but tg@slartibartfast:~/uni/datasets/nk/xds_run3$ labelit.png_1.8.1-1168 DX-CORRECTIONS.cbf Traceback (most recent call last): File "/xtal/Suites/Phenix/phenix-1.8.1-1168/build/intel-linux-2.6-x86_64/../../labelit/command_line/png.py", line 27, in <module> OV = overlay_plain(infile,graphics_bin) File "/xtal/Suites/Phenix/phenix-1.8.1-1168/build/intel-linux-2.6-x86_64/../../labelit/command_line/png.py", line 6, in __init__ OverlayDriverClass.__init__(self,infile,graphics_bin) File "/xtal/Suites/Phenix/phenix-1.8.1-1168/labelit/command_line/overlay_distl.py", line 19, in __init__ self.I = GenericImageWorker(infile,binning=graphics_bin) File "/xtal/Suites/Phenix/phenix-1.8.1-1168/labelit/graphics/support.py", line 12, in __init__ images = ImageFiles(imagenames,labelit_commands) File "/xtal/Suites/Phenix/phenix-1.8.1-1168/labelit/command_line/imagefiles.py", line 184, in __init__ self.filenames = FileNames(arg_module,phil_params) File "/xtal/Suites/Phenix/phenix-1.8.1-1168/labelit/command_line/imagefiles.py", line 70, in __init__ self.interface3_parse_command() File "/xtal/Suites/Phenix/phenix-1.8.1-1168/cctbx_project/spotfinder/diffraction/imagefiles.py", line 138, in interface3_parse_command self.interface3_FN_factory(os.path.abspath(file),error_message="File name not accepted") File "/xtal/Suites/Phenix/phenix-1.8.1-1168/cctbx_project/spotfinder/diffraction/imagefiles.py", line 127, in interface3_FN_factory raise Exception("Input error: "+error_message) Exception: Input error: File name not accepted Compared to: tg@slartibartfast:~/uni/datasets/nk/xds_run3$ adxv -sa DX-CORRECTIONS.cbf DX-CORRECTIONS.tiff Adxv Version 1.9.8 Copyright (C) 1994-2011 by Andrew Arvai, Area Detector Systems Corporation Recognized CBF format data. Warning: Could not find diffrn_frame_data or diffrn_data_frame tg@slartibartfast:~/uni/datasets/nk/xds_run3$ identify DX-CORRECTIONS.tiff DX-CORRECTIONS.tiff TIFF 768x768 768x768+0+0 8-bit PseudoClass 256c 592KB 0.000u 0:00.000 Cheers, Tim On 01/10/2013 09:59 PM, Frank von Delft wrote: > Brilliant - thanks Nat!! Easy to work around that feature. > > And thanks Nick!! > > > > > -------- Original Message -------- Subject: Re: [ccp4bb] > Convert cbf to png/tiff? Date: Thu, 10 Jan 2013 12:47:21 -0800 > From: Nat Echols <[log in to unmask]> To: Frank von > Delft <[log in to unmask]> > > > > Using any recent Phenix distribution: > > labelit.png file_name > > For reasons unknown to me, the output is named "plain.png" - I > will bug Nick about this. > > On Thu, Jan 10, 2013 at 12:36 PM, Frank von Delft > <[log in to unmask]> wrote: >> Hello all - anybody know an easy way to convert CBF images >> (Pilatus) into something lossless like tiff or png? >> >> Ideally *easy* as in r e a l l y e a s y and not requiring >> extensive installation of dependencies and stuff. Because then I >> might as well write my own stuff using cbflib and PIL in python. >> >> Thanks! phx > > > > - -- - -- Dr Tim Gruene Institut fuer anorganische Chemie Tammannstr. 4 D-37077 Goettingen GPG Key ID = A46BEE1A -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.12 (GNU/Linux) Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/ iD8DBQFQ8D8kUxlJ7aRr7hoRAkcsAJ9Z4JmZ3zAvFYDRMaGbzunMYTjLNACfQWBP s3YM17LqF9zvCsAK8ezG8xQ= =hXlq -----END PGP SIGNATURE-----