I am rerunning template creation for VBM on Macaque monkeys. However my fslvbm_2_template contains an error in the "fslvbm2c.e70552" file. Here is the error message:
"
** ERROR (nifti_image_read): failed to find header file for '.../.../num_19_20110923_struc_GM_to_T'** ERROR: nifti_image_open(.../.../num_19_20110923_struc_GM_to_T): bad header info
ERROR: failed to open file .../.../19_20_test/num_19_20110923_struc_GM_to_T
Cannot open volume .../.../19_20_test/num_19_20110923_struc_GM_to_T for reading!
** ERROR (nifti_image_read): failed to find header file for 'template_4D_GM'
** ERROR: nifti_image_open(template_4D_GM): bad header info
ERROR: failed to open file template_4D_GM
Cannot open volume template_4D_GM for reading!
** ERROR (nifti_image_read): failed to find header file for 'template_GM'
** ERROR: nifti_image_open(template_GM): bad header info
ERROR: failed to open file template_GM
ERROR: Could not open file"
I find this error message particularly strange since the "num_19_20110923_struc_GM_to_T" .mat and .nii.gz files exist. This is the first file in my template_list (which I will upload) so for some reason the first call is failing and causing the others to fail as well. My template_list is the same as it was before when I had the template creation step working and is in my base fslvbm directory.
Any hints or suggestions would be much appreciated,
Daniel
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Daniel Cole
University of Rochester
Brain and Cognitive Sciences