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How about using a GM mask to specific signal space? I guess the most probable reason for signals in ventricle voxels would be registration errors, which might be confounded with the different blocks of conditions.

SG.

On Sep 25, 2012, at 7:22 PM, Moritz Lehne wrote:

> Dear fMRI experts,
> 
> In an fMRI study using music stimuli I consistently find activations in the ventricles (especially in the posterior horn of the lateral ventricles) when contrasting music vs. silence (in addition to the typical areas related to auditory processing).
> 
> Does anyone have an idea what this may be related to and how to get rid of it? (I already tried adding the mean BOLD signal of CSF voxels as a nuisance regressor into the model - without success. I also tried different cutoff frequencies for the highpass filter. Unfortunately, I didn't record any physiological measures like heart rate or respiration that I could add to the model.)
> 
> Thank you for your answers (and sorry for bothering you with questions that are not exactly SPM related).
> 
> Cheers,
> Moritz

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Seung-Goo KIM