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Hi,

I have a question about how to join two atoms together so that in Pymol
a bond is drawn between them. I have 2 sugar molecules that are
covalently bound, but in the the PDB they are separate sugar molecules
and they need to be joined together by a single bond. Do I have to
annotate the PDB file with something like "CONNECT" or "JOIN" or "LINK"?
These are the two atoms I'd like to join.


ATOM  19317  C2  SIA Y   1      20.503  35.557  43.691  1.00 22.97
C
ATOM  19387  O9  SLB Z   1      21.630  36.539  45.311  1.00 28.53
O


Thanks,

Chris 



-- 
Dr. Christopher Browning
Post-Doctor to Prof. Petr Leiman
EPFL
BSP-416
1015 Lausanne
Switzerland
Tel: 0041 (0) 02 16 93 04 40