Hi - you need more padding slices - see flirt options….


On 16 Aug 2012, at 15:18, Rajagopalan, Venkateswaran wrote:

Error when using Flirt

Hi All,

I am trying to register my b0 images from two time points unfortunately some of the slices are lost as shown in the PDF attachment.

What parameter do I need adjust anything to do with interpolation I am using now the default settings of FLIRT 12 dof, COST FUNCTION CORRELATION RATIO, interp trilinear interp

Thanks
Venkat

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<registration_fail.pdf>


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