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Thanks Stam!

Another question for everyone - after running Bedpost, this error came up:

/usr/local/fsl/bin/bedpostx: line 262: kill: (61932) - No such process

However, the files were still generated. What does the error mean, then?

Thanks in advance!

Crystal

On Mon, Jun 11, 2012 at 10:48 AM, Stamatios Sotiropoulos <[log in to unmask]> wrote:
Hi Crystal
 
This has to do with a monitor that runs within the bedpostX script. If you have not received any error messages, processing should have finished fine. If you are concerned, please check the output and make sure that everything looks OK.
 
Cheers
Stam
 
----- Original Message -----
From: [log in to unmask]" href="mailto:[log in to unmask]" target="_blank">Crystal Zhou
To: [log in to unmask]" href="mailto:[log in to unmask]" target="_blank">[log in to unmask]
Sent: Monday, June 11, 2012 5:43 PM
Subject: [FSL] BedpostX - skipped slices

Hello FSL experts,

While running BedpostX, I noticed an irregularity in how each slice was being processed. Sometimes each slice is processed three times, sometimes twice, sometimes once, and sometimes not at all. And sometimes, oddly enough, FSL does not show any error message despite this.

Example segment:

0 slices processed
0 slices processed
0 slices processed
1 slices processed
1 slices processed
2 slices processed
2 slices processed
2 slices processed
3 slices processed
3 slices processed
3 slices processed
4 slices processed
4 slices processed
5 slices processed
5 slices processed
5 slices processed
6 slices processed
6 slices processed
6 slices processed
7 slices processed
7 slices processed
7 slices processed
8 slices processed
8 slices processed
8 slices processed
9 slices processed
9 slices processed
10 slices processed
10 slices processed
10 slices processed
12 slices processed
12 slices processed
All slices processed
Done!

Thank you in advance for your help!

Crystal