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The total model that fits the observable electron density should be the standard for the PDB FASTA file with the deposited structure factors, however, not all depositions contain a link to the expression construct details because many are not published, and I believe that it should be explicitly detailed in the submission. Chad On 3/26/12 7:54 PM, "Francois Berenger" <[log in to unmask]> wrote: Dear list, If I take all the fasta files for proteins in the PDB, are the sequences complete? I mean, do they have holes sometimes (missing amino acids)? Sorry for the maybe stupid question but I know that sometimes the PDB files have missing residues, I am hoping that it is not the case with the FASTA files. Regards, Francois. *************************** Chad R. Simmons Researcher Biodesign Institute at Arizona State University P.O. Box 875601 Tempe, AZ 85287 Office: (480) 727-6495 Lab: (480) 727-0428 Fax: (480) 727-0396