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-----Ursprüngliche Nachricht----- Von: Couto, Blas Gesendet: Donnerstag, 26. Januar 2012 12:17 An: [log in to unmask] Betreff: WG: [SPM] T1 data suitability for VBM Dear Christopher, thanks for your response. I do want the not- o* and not- co* images, though while doing the conversion, besides this two types of files, I have as output 3 other .nii which contains slices. However, this slices happens to be of good quality in just one of the orientations (e.g sagittal) but not in the other 2, and so on with the three files.nii. Would you have any idea why this is working so? And why I do not have a single 3D volume with the 3 orientations of suitable (or at least similar) quality of voxel? Thankyou in advance, again. Kind regards, Blas Couto -----Ursprüngliche Nachricht----- Von: Chris Watson [mailto:[log in to unmask]] Gesendet: Mittwoch, 25. Januar 2012 20:05 An: Couto, Blas Cc: [log in to unmask] Betreff: Re: [SPM] T1 data suitability for VBM I believe you want the image that is not the o* or co* image. On my system, the output filename is the study protocol that is entered on the scanner, so it would output e.g. STUDY.nii oSTUDY.nii coSTUDY.nii Couto, Blas wrote: > > Dear collegues, > > > > I have a sample data of structural MRIs, and I would like to try a VBM > analysis. However, while converting DICOM files to nifti (using Chris > Rorden´s software dcm2nii ), my output files are 2 or more .nii > containing either sagital, coronal or axial T1 oriented slices. I > would like to know if they are all/either suitable for SPM VBM analysis? > > > > Thank you all in advance. > > Best regards, > > > > Blas Couto > > > > > > _________________________________________________________ > > *Juan Blas Marcos Couto, M.D.* > > *Researcher* > > *Laboratory of Experimental Psychology & Neuroscience* > > *Institute of Cognitive Neurology (INECO) & CONICET* > > *Pacheco de Melo 1854/60 (C1126AAB) > Buenos Aires, Argentina > Phone/Fax: +54 (11) 4812-0010* > > >