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Dear Gregor,

The idea behing BEM is that the model consists in nested volumes with uniform and isotropic conductivities.
A thin CSF volume could have been included between the "brain volume" and "skull volume" but wasn't because
- at the time that CSF layer was difficult to extract from sMRI
- its influence would be relatively small given the high conductivity of CSF in a thin layer around the brain volume
- it could have lead to numerical errors given the thinness of that compartment
- time would have been better spent including the ventricles or other bits of the head in the model.

Best,
Chris


Le 20/01/2012 21:10, Vladimir Litvak a écrit :
[log in to unmask]" type="cite">Yes, brain and CSF is the same thing for this particular purpose. You can get more technical details from Christophe (CCed) who wrote the BEM code.

Best,

Vladimir

On Fri, Jan 20, 2012 at 6:31 PM, Gregor Strobbe <[log in to unmask]> wrote:
Thank you for your answer, 

I assume the CSF isn't modeled, just one brain compartment with one conductivity value? 

I am asking this, because I want to build exactly the same model based on the Finite Difference Method to compare with BEM as a first comparison step. The next step is to compare with more advanced FDM head models. 

Kind regards


2012/1/20 Vladimir Litvak <[log in to unmask]>
Dear Gregor,

What matters for the BEM computation is the inner skull boundary which separates the bone compartment from the CSF compartment. The brain surface is only used to create the source model for imaging source reconstruction i.e. figure out where the dipoles are located and how they are oriented. If you just want to put a dipole somewhere inside the head and compute its lead field you don't need the cortical surface for that. I hope this helps.

Best,

Vladimir


On Fri, Jan 20, 2012 at 3:03 PM, Gregor Strobbe <[log in to unmask]> wrote:
Dear SPM experts,

I have a question about the bemcp method to build a BEM model for EEG source reconstruction in SPM. Am I right that there are three different tissues assumed in the model, including scalp, skull and brain tissue? Can someone explain me, how the cortical surface is incorporated in this model? Is the cortical surface explicitly incorporated in the calculation of the BEM lead fields? 

Kind regards

Gregor 

--

Gregor Strobbe

Doctoral researcher
IBiTech - Medisip (Ghent University)
De Pintelaan 185, Blok B
BE-9000 Gent (Belgium)
Tel: +3293324322





--

Gregor Strobbe

Doctoral researcher
IBiTech - Medisip (Ghent University)
De Pintelaan 185, Blok B
BE-9000 Gent (Belgium)
Tel: +3293324322