you can use STRAP for that: http://3d-alignment.eu/. It allows you to do multible sequence alignments and use various algorithms to predict secondary structure or display secondary structure assignments of PDB entries.
Cheers
Florian
Am 30.01.2012 um 11:02 schrieb sreetama das:
Dear All,
Is there any module in CCP4/ other related software/servers which can show a multiple alignment of homologous sequences from a protein family, together with their secondary structures?
