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Hi - I think you're ok to: - kill all running processes - remove all empty .msf files and best.msf rerun tbss_2_reg Cheers On 16 Dec 2011, at 12:37, Erik O'Hanlon wrote: > Dear Experts, > > I'm running a TBSS analysis on a 2 group dataset with 50 subjects in each. I'm running it on a cluster with 32 nodes using slurm. Unfortunately my process stopped during tbss_2_reg (with the -n option) due to a storage space issue. This was resolved and the process was restarted. I checked and there are no msf files with 0 size and I have the following files in the FA dir > target_mask.nii.gz > target.nii.gz > target_to_MNI152.mat > target_to_MNI152.nii.gz. > as well as the usual subject specific files as far as I can see. I also have the best.msf file. > The process is now running imglob for 48hrs. Is this normal or is it stuck? Any advise on what to check and how to continue would be greatly appreciated. > > Regards and thanks > > Erik > --------------------------------------------------------------------------- Stephen M. Smith, Professor of Biomedical Engineering Associate Director, Oxford University FMRIB Centre FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK +44 (0) 1865 222726 (fax 222717) [log in to unmask] http://www.fmrib.ox.ac.uk/~steve ---------------------------------------------------------------------------