Print

Print


LIGPLOT will show this graphically, if the correct parameters are set in ligplot.prm, but not state the interactions explicitly:

http://www.ebi.ac.uk/thornton-srv/software/LIGPLOT/

The relevant lines in ligplot.prm:
PLOT PARAMETERS
---------------
Y     <- Include: Hydrophobic interactions - (Y/N)?
HTH,
Iain


On Wednesday,Dec 14 12:34 PM, Luthra,Amit wrote:
[log in to unmask]" type="cite">

Hi Everyone

I have to calculate hydrophobic interactions in pdb files. Is any server available for this type of calculation?

 

Thanks in advance

 

Amit