Dear FSL Team,
I had feeds error (I compiled fsl 4.1.8 myself) :
yingying@yingying-debian:~/opt/fsl_feeds$ ./RUN all
FSL Evaluation and Example Data Suite v4.1.8
start time = Wed Sep 28 23:30:34 EDT 2011
hostname = yingying-debian
os = Linux yingying-debian 2.6.32-5-amd64 #1 SMP Fri Sep 9 20:23:16 UTC 2011 x86_64 GNU/Linux
/bin/rm -rf /home/yingying/opt/fsl_feeds/results ; mkdir /home/yingying/opt/fsl_feeds/results
Starting PRELUDE & FUGUE at Wed Sep 28 23:30:34 EDT 2011
% error = 0.0
% error = 0.0
Starting SUSAN at Wed Sep 28 23:30:35 EDT 2011
% error = 0.03
Starting SIENAX (including testing BET and FLIRT and FAST) at Wed Sep 28 23:32:22 EDT 2011
checking error on BET:
% error = 0.0
checking error on FLIRT:
% error = 0.0
checking error on FAST:
checking error on single-image binary segmentation:
% error = 0.37
checking error on partial volume images:
% error = 0.28
% error = 0.41
% error = 0.29
checking error on SIENAX volume outputs:
% error = 0.18
% error = 0.11
% error = 0.49
% error = 0.02
% error = 0.51
Starting BET2 at Wed Sep 28 23:45:15 EDT 2011
checking error on T1 brain extraction:
% error = 0.0
checking error on skull and scalp surfaces:
% error = 0.02
% error = 0.03
% error = 0.14
Starting FEAT at Wed Sep 28 23:53:08 EDT 2011
checking error on filtered functional data:
No output image created
Warning - test failed!
checking error on raw Z stat images:
No output image created
Warning - test failed!
No output image created
Warning - test failed!
No output image created
Warning - test failed!
checking error on thresholded Z stat images:
No output image created
Warning - test failed!
No output image created
Warning - test failed!
No output image created
Warning - test failed!
checking error on registration images:
No output image created
Warning - test failed!
No output image created
Warning - test failed!
checking error on position of largest cluster of Talairached zfstat1:
couldn't open "/home/yingying/opt/fsl_feeds/results/fmri.feat/cluster_zfstat1_std.txt": no such file or directory
while executing
"open ${FEEDSDIR}/results/fmri.feat/cluster_zfstat1_std.txt r "
invoked from within
"if { $feeds(feat) } {
puts "\nStarting FEAT at [ exec date ]"
# fix FEAT setup file to use FEEDSDIR and FSLDIR
fsl:exec "cp ${FEEDSDIR}/data/fmri.fe..."
(file "./RUN" line 285)
Why FEAT will not work?
Thanks a lot.
yingying