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Perhaps your .bash_profile isn't being sourced during your login? Try the following: . .bash_profile Note. That is "dot space dot bash_profile" then try... fslview On 27 Sep 2011, at 16:38, Supreet kaur wrote: > Hello Kay, > Thanks for your prompt reply. When I try to input the commands in the terminal window for fsl GUI, it doen't > open up the FSL GUI (with the fish bone). Please see my commands below: > > [fsl@localhost fsldoc]$ fslview > bash: fslview: command not found > [fsl@localhost fsldoc]$ > your help will be appreciated. > Thanks, > Supreet > > On Tue, Sep 27, 2011 at 11:34 AM, Benjamin Kay <[log in to unmask]> wrote: > On Tuesday, September 27, 2011 11:15:01 you wrote: > > Dear fsl experts, > > I am having a FSL installation problem and have > > been struggling hard since last week.. > > I have downloaded the VMware virtual environment. And it has installed > > fsl-4.1.8-centos5_32.tar.gz file and fsl installer.sh > > its desktop. But once i try to install the FSL , it gives me an error > > commands as shown: > > > > [fsl@localhost fsldoc]$ bash fsl_installer.sh > > FSL install script > > ================== > > > > Looking for FSL tarball in the current directory... > > *************************************************************** > > No FSL tarball specified, assuming you want me to install > > /home/fsl/Desktop/fsldoc/fsl-4.1.8-centos5_32.tar.gz > > from the current directory. > > *************************************************************** > > > > Where would you like to install FSL to? [/usr/local] /home/fsl/ > > > > Checking OS release ... > > [OK] > > Checking CPU type... > > [OK] > > Checking install file...(this may take several minutes) > > [Skipped] > > Installing FSL from /home/fsl/Desktop/fsldoc/fsl-4.1.8-centos5_32.tar.gz > > into /home/fsl/... > > [OK] > > Patching environment > > .bash_profile already contains a FSLDIR definition which is wrong.\nFixing > > FSLDIR configuration... > > '/home/fsl/.bash_profile' updated with new FSLDIR definition. > > [fsl@localhost fsldoc]$ > > Your help will be highly appreciated > > It looks like installation failed during a previous attempt but worked this > time. Have you tried running any fsl commands to see if they work? If you > simply run "fsl" from the commandline you ought to get an GUI. > > > > -- > Sincerely, > > Supreet kaur > -- Dave Flitney, IT Manager Oxford Centre for Functional MRI of the Brain E:[log in to unmask] W:+44-1865-222713 F:+44-1865-222717 URL: http://www.fmrib.ox.ac.uk/~flitney