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Interesting iPhone formatting things going on... Let's try again... First line is "greater than symbol" > followed by some text about your protein then closed with a semicolon. The next line is blank. The next line contains your amino acid sequence, which you can also close with an optional asterisk. Sent from my iPhone On 12 Aug 2011, at 10:06, "Antony Oliver" <[log in to unmask]> wrote: > PIR is fairly similar to Fasta, from addled memory the format is... > >> protein name; > ----empty line---- > MPREIL...rest of amino acid sequence with an optional asterisk to mark the sequence end. > > Tony > > Sent from my iPhone > > On 12 Aug 2011, at 09:14, "Phil Evans" <[log in to unmask]> wrote: > >> Can anyone get this server to work? For me it keeps complaining that my sequence file is not a PIR file. The file looks OK to me, but I've never really understood what a PIR file is >> >> Phil >> >> On 12 Aug 2011, at 01:39, Kevin Jin wrote: >> >>> >>> Should we really have some crystallographers to review and qc those structures before the formal releasing? JCSG has set a very good mechanism for this issue. >>> >>> There is a sever for self check. >>> >>> http://smb.slac.stanford.edu/jcsg/QC/ >>> >>> >>> >>> >>> >>> >>> On Thu, Aug 11, 2011 at 4:58 PM, Jacob Keller <[log in to unmask]> wrote: >>> I think they fudged the data in this paper... >>> >>> JPK >>> >>> On Thu, Aug 11, 2011 at 6:30 PM, David Schuller <[log in to unmask]> wrote: >>>> link: http://iai.asm.org/cgi/reprint/IAI.05661-11v1 >>>> >>>> Ferric C. Fang & Arturo Casadevall >>>> Retracted Science and the Retraction Index >>>> Infec. Immun. doi:10.1128/IAI.05661-11 >>>> >>>> Abstract: Articles may be retracted when their findings are no longer >>>> considered trustworthy due to scientific misconduct or error, they >>>> plagiarize previously published work, or are found to violate ethical >>>> guidelines. Using a novel measure that we call the “retraction index,” we >>>> found that the frequency of retraction varies among journals and shows a >>>> strong correlation with the journal impact factor. >>>> ... >>>> >>>> (with special attention to Figure 1, Retraction Index vs. Impact Factor) >>>> >>>> >>>> -- >>>> ======================================================================= >>>> All Things Serve the Beam >>>> ======================================================================= >>>> David J. Schuller >>>> modern man in a post-modern world >>>> MacCHESS, Cornell University >>>> [log in to unmask] >>>> >>> >>> >>> >>> -- >>> ******************************************* >>> Jacob Pearson Keller >>> Northwestern University >>> Medical Scientist Training Program >>> cel: 773.608.9185 >>> email: [log in to unmask] >>> ******************************************* >>>