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Jalview is another option.
http://www.jalview.org/
Sent from my HTC
----- Reply message -----
From: "Yuri" <[log in to unmask]>
Date: Fri, Aug 19, 2011 00:31
Subject: [ccp4bb] Sequence Alignment Question
To: <[log in to unmask]>
UID 23435 BODY[1]<0> {238}
Hello Everyone,
A little off topic but, what is a good way to show (publication
quality) multiple sequence alignment?
I am trying to show conserved regions in related proteins from
different organisms.
Thank you
--
Yuri Pompeu