Hi FSL experts,
Im' running FSL-VBM analyses. By following the instructions, I was able to run the first step successfully using fslvbm_1_bet -N. Everything seems right utill I check the "template_GM_4D" image after the 'fslvbm_2_template -n' script using fslview. About half of the brains get wrong orientations. The "_struc_GM_to_T" images of each subject get right orientations. And "_struc_GM_to_T_init" get wrong orientations, same as the corresponding image in "template_GM_4D".
Can anyone give some help ?
Thanks in advance.
Wen Miao
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State Key Laboratory of Intelligent Control and Management of Complex Systems
Institute of Automation,Chinese Academy of Sciences(CASIA)
Beijing, 100190, P.R.CHINA
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