and use this dos command 'bet.exe %1.img s_%1.img -f 0.5'

%1 being the image name and -f is a threshold parameter

you can play with.

Hope this helps

Brahim  

> Date: Fri, 10 Jun 2011 01:00:28 -0700
> From: [log in to unmask]
> Subject: [SPM] Using bet in spm/matlab
> To: [log in to unmask]
>
> Hi all,
>
> Could anyone please tell if we could run brain extraction tool in matlab/spm? If yes, could you please send me the relevant files for running.
>
> Thank you for your time,
> Aaryani