Also see this paper on why that design is problematic:

Zarahn E, Aguirre G, D’Esposito M. 1997. A trial-based experimental design for fMRI. NeuroImage. 6:122--138.

Cheers,
Michael

On Fri, Mar 25, 2011 at 12:18 PM, Chris Watson <[log in to unmask]> wrote:
Are you saying that there is a trial every 300-500ms? If so, then yes, the BOLD response will probably not be linear. However, it wouldn't necessarily kill all the signal, which may be why the results you got look reasonable.
If there are, say 2 trial types (gamble vs. sure), then perhaps the distribution of trials creates enough of a jitter.

Andrew Jahn wrote:
Hi SPMers,

I ran a subject through an experiment combining eyetracking and fMRI scanning simultaneously.  I calculated where they were looking at, and depending on where the eye fixation fell, I coded that as a trial (for example, focusing on choosing a gamble or focusing on getting a sure thing).  I included the duration of the fixation in the regressor and convolved each with the HRF.

Most of these fixations are only a fraction of a second long, usually lasting ~300-500ms.  My question is, with so many trials so close together, does this violate the assumption of linearity in the BOLD response as outlined by Dale & Buckner (1997)?  My design matrix looks fine, and there are no instances of singularity.  Furthermore, the results that I have gotten appear to be reasonable.  I would appreciate any feedback.


Thanks!

-Andrew



--
Research Associate
Gazzaley Lab
Department of Neurology
University of California, San Francisco