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Oh right - there isn't one, sorry. You'll need to use matlab then... sorry.. Saad. On 30 Mar 2011, at 15:28, R Duke wrote: > Thank you again Saad! One last question - I do not see a mode option under fslmaths? Is there one? Cheers! > > From: Saad Jbabdi <[log in to unmask]> > To: [log in to unmask] > Sent: Tue, March 29, 2011 11:48:47 AM > Subject: Re: [FSL] Proj_Thresh > > Yes you can use fslmerge across subjects on the classification output and fslmaths to get the mode, that's fine. > > Saad. > > On 29 Mar 2011, at 11:45, R. Duke wrote: > > > Thank you Saad! > > > > I was also wondering how I might combine this information across X number of subjects. Example, would you recommend a technique (fslmerge?) to combine my seed images across subjects so that I can say that this one voxel in all subjects goes to target A? Is this an appropriate approach? This might get complicated because I have a cluster of 600 voxels, 30 subjects, and 5 target ROI's. However, if I could calculate the mode across all subjects in each voxel using my hard segmentation results I might be able to say something about each voxel in my cluster. > > > > I really appreciate all of your help. > > > > Cheers! > > > > -- > Saad Jbabdi > University of Oxford, FMRIB Centre > > JR Hospital, Headington, OX3 9DU, UK > (+44)1865-222466 (fax 717) > www.fmrib.ox.ac.uk/~saad > > -- Saad Jbabdi University of Oxford, FMRIB Centre JR Hospital, Headington, OX3 9DU, UK (+44)1865-222466 (fax 717) www.fmrib.ox.ac.uk/~saad