thanks Stamatios,
 
The problem is when I have to create the mask (to exclude the ischaemic lesions of the analysis). I dont't know how can I do it and is there any protocol for stroke lesions?
 
thanks
 


 
2011/3/17 Stamatios Sotiropoulos <[log in to unmask]>
Hi,
 
you can do many different things with FDT, the diffusion toolbox. Look at http://www.fmrib.ox.ac.uk/fsl/fdt/fdt_dtifit.html for example, for fitting tensors to the data and computing FAs and MDs. For voxelwise statistics across subjects, take a look at the TBSS documentation http://www.fmrib.ox.ac.uk/fsl/tbss/index.html
 
If you are new to FSL, you may find the FSL course lecture slides and step-by-step practicals useful.
http://www.fmrib.ox.ac.uk/fslcourse/
 
Cheers,
Stam
 
----- Original Message -----
From: [log in to unmask]" href="mailto:[log in to unmask]" target="_blank">Marina Fernández
To: [log in to unmask]" href="mailto:[log in to unmask]" target="_blank">[log in to unmask]
Sent: Thursday, March 17, 2011 10:13 PM
Subject: [FSL] FSL in DTI with stroke patients

Hello, 

I want to ask if anyone has used the FSL for analysis of DTI or VBM in patients with Stroke. Could you say me How can I do the analysis of images? Is there any protocol that explains it?

Thank you very much