Hi,you can do many different things with FDT, the diffusion toolbox. Look at http://www.fmrib.ox.ac.uk/fsl/fdt/fdt_dtifit.html for example, for fitting tensors to the data and computing FAs and MDs. For voxelwise statistics across subjects, take a look at the TBSS documentation http://www.fmrib.ox.ac.uk/fsl/tbss/index.htmlIf you are new to FSL, you may find the FSL course lecture slides and step-by-step practicals useful.Cheers,Stam----- Original Message -----From: [log in to unmask]" href="mailto:[log in to unmask]" target="_blank">Marina FernándezTo: [log in to unmask]" href="mailto:[log in to unmask]" target="_blank">[log in to unmask]Sent: Thursday, March 17, 2011 10:13 PMSubject: [FSL] FSL in DTI with stroke patientsHello,I want to ask if anyone has used the FSL for analysis of DTI or VBM in patients with Stroke. Could you say me How can I do the analysis of images? Is there any protocol that explains it?Thank you very much