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Dear Chiharu, You do need to install FSL inside the virtual machine. You can either change to root using /bin/su (as described in the installation pages) *or* you can choose a different location to install fsl (not /usr/local but say /home/fsl instead). Either approach should work. All the best, Mark On 17 Feb 2011, at 19:28, Xue, Feng wrote: > BTW, if I am correct, what you have installed is a vmware virtual > machine which has fsl installed already. > > On Thu, Feb 17, 2011 at 11:27 AM, Xue, Feng <[log in to unmask]> wrote: >> Sorry, I forgot your fsl account is not in sudoers, can you try root account? >> >> On Thu, Feb 17, 2011 at 11:10 AM, Chiharu AMEMIYA >> <[log in to unmask]> wrote: >>> Hi Xue, >>> I just installed fsl on my Windows PC. >>> And I tried this command, then got these sentences, >>> --- >>> [fsl@localhost Desktop]$ sudo fsl_installer.sh >>> Password: >>> fsl is not in the sudoers file. This incident will be reported. >>> [fsl@localhost Desktop]$ pwd >>> /home/fsl/Desktop >>> --- >>> I think it didn't make any sense. >>> Thank you, >>> Chiharu >>> >>> On 17 February 2011 18:50, Xue, Feng <[log in to unmask]> wrote: >>>> >>>> Hi, >>>> >>>> He is of course under linux, perhaps in fsl' virtual machine I guess >>>> >>>> Chemaru, are you going to upgrade your current fsl installation? may >>>> be you need try "sudo fsl_installer.sh" >>>> >>>> On Thu, Feb 17, 2011 at 10:27 AM, Alan Francis <[log in to unmask]> >>>> wrote: >>>>> Hi Chemaru: >>>>> >>>>> Since this is a Windows computer, you would need Administrator >>>>> privileges to >>>>> install and run anything. The "root" and "sudo" are for Linux. >>>>> >>>>> >>>>> >>>>> On Thu, Feb 17, 2011 at 8:22 PM, Chiharu AMEMIYA >>>>> <[log in to unmask]> >>>>> wrote: >>>>>> >>>>>> Hi, >>>>>> Thank you for your advice. >>>>>> But how can I root or add fsl to my sudoer list? >>>>>> I've already checked about it on FSL webpage, but I couldn't find out. >>>>>> Regards >>>>>> Chiharu >>>>>> On 17 February 2011 18:13, Xue, Feng <[log in to unmask]> wrote: >>>>>>> >>>>>>> Hi, >>>>>>> you need to be either root or to add fsl to your sudoer list >>>>>>> >>>>>>> On Thu, Feb 17, 2011 at 9:20 AM, Chiharu AMEMIYA >>>>>>> <[log in to unmask]> wrote: >>>>>>>> To whom it may concern, >>>>>>>> I would like to ask about FSL install on Windows. >>>>>>>> I tried again and again, but every time I failed. >>>>>>>> I pasted what I got until now on a terminal window below. >>>>>>>> Could you please tell me how can I figure out? >>>>>>>> --- >>>>>>>> [fsl@localhost ~]$ pwd >>>>>>>> /home/fsl >>>>>>>> [fsl@localhost ~]$ cd /home/fsl/Desktop/usr/ >>>>>>>> [fsl@localhost usr]$ pwd >>>>>>>> /home/fsl/Desktop/usr >>>>>>>> [fsl@localhost usr]$ ls -al >>>>>>>> total 1340160 >>>>>>>> drwxrwxr-x 2 fsl fsl 4096 Feb 17 11:14 . >>>>>>>> drwxr-xr-x 3 fsl fsl 4096 Feb 17 11:12 .. >>>>>>>> -rw-rw-r-- 1 fsl fsl 1370911031 Feb 17 10:50 >>>>>>>> fsl-4.1.7-centos5_32.tar.gz >>>>>>>> -rw-rw-r-- 1 fsl fsl 37127 Feb 17 10:21 fsl_installer.sh >>>>>>>> [fsl@localhost usr]$ bash fsl_installer.sh >>>>>>>> FSL install script >>>>>>>> ================== >>>>>>>> >>>>>>>> Looking for FSL tarball in the current directory... >>>>>>>> ****************************** >>>>>>>> ********************************* >>>>>>>> No FSL tarball specified, assuming you want me to install >>>>>>>> /home/fsl/Desktop/usr/fsl-4.1.7-centos5_32.tar.gz >>>>>>>> from the current directory. >>>>>>>> *************************************************************** >>>>>>>> >>>>>>>> Where would you like to install FSL to? [/usr/local] >>>>>>>> touch: cannot touch `/usr/local/.fsl-test': Permission denied >>>>>>>> Will require Administrator priviledges to write to '/usr/local' >>>>>>>> Enter a password to elevate to Administrator rights when prompted >>>>>>>> Password: >>>>>>>> fsl is not in the sudoers file. This incident will be reported. >>>>>>>> Sorry, you cannot install FSL as this user, either install as the >>>>>>>> root >>>>>>>> user >>>>>>>> or as a user with sudo rights. >>>>>>>> You can then re-run fsl_installer.sh with the -e option to setup >>>>>>>> your >>>>>>>> user >>>>>>>> account for running FSL. >>>>>>>> [fsl@localhost usr]$ bash fsl_installer.sh -e >>>>>>>> FSL install script >>>>>>>> ================== >>>>>>>> >>>>>>>> Patching environment >>>>>>>> Where is FSL installed? [/usr/local] >>>>>>>> '/usr/local' doesn't appear to contain a FSL install. >>>>>>>> Where is FSL installed? [/usr/local] >>>>>>>> '/usr/local' doesn't appear to contain a FSL install. >>>>>>>> Where is FSL installed? [/usr/local]usr >>>>>>>> 'usr' doesn't exist, would you like me to create it? [yes] >>>>>>>> .bash_profile already contains a FSLDIR definition which is >>>>>>>> wrong.\nFixing >>>>>>>> FSLDIR configuration... >>>>>>>> '/home/fsl/.bash_profile' updated with new FSLDIR definition. >>>>>>>> bash: usr/fsl/etc/fslconf/fsl.sh: No such file or directory >>>>>>>> >>>>>>>> [fsl@localhost usr]$ bash users >>>>>>>> /usr/bin/users: /usr/bin/users: cannot execute binary file >>>>>>>> [fsl@localhost usr]$ tcsh users >>>>>>>> users: No such file or directory. >>>>>>>> [fsl@localhost usr]$ >>>>>>>> >>>>>>>> --- >>>>>>>> >>>>>>>> >>>>>>>> Sincerely, >>>>>>>> Chiharu >>>>>>>> -- >>>>>>>> >>>>>>>> >>>>>>>> ---------------------------------------------------------------------------------------------- >>>>>>>> Chiharu Amemiya (Master student) >>>>>>>> Master of Research in Brain Imaging and Cognitive Neuroscience >>>>>>>> Cognitive Development Group >>>>>>>> University of Birmingham Infant and Child Laboratory >>>>>>>> University of Birmingham >>>>>>>> Edgbaston, Birmingham, B15 2TT >>>>>>>> T: +44 (0) 121 414 7219 >>>>>>>> E: [log in to unmask] >>>>>>>> W:http://www.icl.bham.ac.uk/main.php >>>>>>>> http://sites.google.com/site/mccleerygroup/ >>>>>>>> >>>>>>>> >>>>>>>> ---------------------------------------------------------------------------------------------- >>>>>>>> >>>>>>> >>>>>>> >>>>>>> >>>>>>> -- >>>>>>> Best Regards >>>>>>> >>>>>>> Xue, Feng Ph.D. >>>>>>> Major in Developmental Cognitive Neuroscience >>>>>>> >>>>>>> Psychology Department >>>>>>> University of Southern California >>>>>>> Los Angeles CA, 90089 >>>>>>> Mobile: 310-904-2591 >>>>>>> ============================================== >>>>>>> National Key Laboratory of Cognitive Neuroscience and Learning >>>>>>> Beijing Normal University >>>>>>> Beijing, China. 100875 >>>>>>> Tel: +86-13810154455 >>>>>>> web: http://psychbrain.bnu.edu.cn >>>>>> >>>>>> >>>>>> >>>>>> -- >>>>>> >>>>>> >>>>>> ---------------------------------------------------------------------------------------------- >>>>>> Chiharu Amemiya (Master student) >>>>>> Master of Research in Brain Imaging and Cognitive Neuroscience >>>>>> Cognitive Development Group >>>>>> University of Birmingham Infant and Child Laboratory >>>>>> University of Birmingham >>>>>> Edgbaston, Birmingham, B15 2TT >>>>>> T: +44 (0) 121 414 7219 >>>>>> E: [log in to unmask] >>>>>> W:http://www.icl.bham.ac.uk/main.php >>>>>> http://sites.google.com/site/mccleerygroup/ >>>>>> >>>>>> >>>>>> ---------------------------------------------------------------------------------------------- >>>>> >>>>> >>>> >>>> >>>> >>>> -- >>>> Best Regards >>>> >>>> Xue, Feng Ph.D. >>>> Major in Developmental Cognitive Neuroscience >>>> >>>> Psychology Department >>>> University of Southern California >>>> Los Angeles CA, 90089 >>>> Mobile: 310-904-2591 >>>> ============================================== >>>> National Key Laboratory of Cognitive Neuroscience and Learning >>>> Beijing Normal University >>>> Beijing, China. 100875 >>>> Tel: +86-13810154455 >>>> web: http://psychbrain.bnu.edu.cn >>> >>> >>> >>> -- >>> ---------------------------------------------------------------------------------------------- >>> Chiharu Amemiya (Master student) >>> Master of Research in Brain Imaging and Cognitive Neuroscience >>> Cognitive Development Group >>> University of Birmingham Infant and Child Laboratory >>> University of Birmingham >>> Edgbaston, Birmingham, B15 2TT >>> T: +44 (0) 121 414 7219 >>> E: [log in to unmask] >>> W:http://www.icl.bham.ac.uk/main.php >>> http://sites.google.com/site/mccleerygroup/ >>> ---------------------------------------------------------------------------------------------- >>> >> >> >> >> -- >> Best Regards >> >> Xue, Feng Ph.D. >> Major in Developmental Cognitive Neuroscience >> >> Psychology Department >> University of Southern California >> Los Angeles CA, 90089 >> Mobile: 310-904-2591 >> ============================================== >> National Key Laboratory of Cognitive Neuroscience and Learning >> Beijing Normal University >> Beijing, China. 100875 >> Tel: +86-13810154455 >> web: http://psychbrain.bnu.edu.cn >> > > > > -- > Best Regards > > Xue, Feng Ph.D. > Major in Developmental Cognitive Neuroscience > > Psychology Department > University of Southern California > Los Angeles CA, 90089 > Mobile: 310-904-2591 > ============================================== > National Key Laboratory of Cognitive Neuroscience and Learning > Beijing Normal University > Beijing, China. 100875 > Tel: +86-13810154455 > web: http://psychbrain.bnu.edu.cn >