Hi Stephen, 


You can use the File> save_batch option in SPM GUI to save a template with the required settings
and then write a small matlab script like the one attached to input new images to the matlab job in a loop

Not sure if there is a more effecient way to do this.

Thanks,
Pradeep





On Thu, Jan 13, 2011 at 6:19 AM, Stephen J. Fromm <[log in to unmask]> wrote:
I want to do the following (pseudocode):

loop over subjects s {
 cd into directory of s
 load *.m batch script
 run batch script
}

Is there a way to write a small wrapper script like that?

Or is there a way to "concatenate" the batch scripts for each subject within the matlabbatch "language" itself, with "run" commands in between?

TIA,

S