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> CARET has the F99, D99, F6, atlases and a few others. Hi, maybe one needs to clarify, whether atlas means atlas or template, or kind of standard space. In my understanding, a standard space is not an atlas. However, Caret offers several atlases for the macaque as well, e.g. based on the Paxinos atlas. To use these atlasses in order to identify regions, it works best for me to transform individual brains into the F99 space with fnirt. Another Method I am using, is to transform individual brains to the Saleem-Logothetis template, so I can directly use their coordinates to identify regions. However the other way around, creating rois of specific regions, I have no dataset I rely on. Here I use my own anatomical rois that I created for one monkey. I transform these to other monkeys and correct them manually. An awful time consuming work to do... If someone has a better method at hand, I would be very happy to hear about it. I think, it would be a great idea, if FSL could include both, a standard template of a macaque brain, as well as a atlas. I hope that some of these guys mentioned in the posts I linked to will provide an atlas soon, and that this could be included in the FSL package. wolf