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Hi, 
 
I just started using SPM and have some questions regarding the segmentation of structural images.
 
I did segmentation of my structural image using default settings and got the results as seen in the attached
file 'structural_segmented'. The top right image is the original structural image. The bottom image is the normalised image 
(using seg_sn.mat and the bias corrected image), which of cause is bad due to bad segmentation. 
 
I manually reoriented the structural image using "Display" where I changed the values "right, forward, up,
pitch, roll and yaw". I then used "Reorient images" and chose my structural image. I did the segmentation on the reoriented image 
and got results as shown in the attached file 'reoriented_structural_segmented'. The segmented images are still bad. 
 
Why do a get such a bad segmentation and what can I do to get a better segmentation?  
 
 
Thanks, Tine