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Hi vivian, I have converted my dicom data using dcm2nii. Do the generated nii files contain the neurological or radiological orientation information? Thanks, Haitao Haitao Ge, Ph.D. Center for Sectional and Imaging Anatomy Shandong University School of Medicine 44#, West Wenhua Rd. Jinan 250012, Shandong P.R.China Tel: +86-15965644699 Email: [log in to unmask] Date: Wed, 1 Sep 2010 00:06:05 -0400 From: [log in to unmask] Subject: Re: [FSL] NIFTI direction To: [log in to unmask] I think you may read the nii files by FSLview or MRIcron? When they read the nii files , they would try to figure out the right-left direction and display the L at left, via the information in header. However it's hard to tell whether it is correct. It is always good to put a marker when you image the subject if you do care about it. 2010/8/31 HAITAO GE <[log in to unmask]> Hi , I have converted my dicom data to NIFTI format. I wanna know the direction of the nii files. Does the left side of the nii is the real leftof the patient? Thanks a lot, Haitao Haitao Ge, Ph.D. Center for Sectional and Imaging Anatomy Shandong University School of Medicine 44#, West Wenhua Rd. Jinan 250012, Shandong P.R.China Tel: +86-15965644699 Email: [log in to unmask] -- Xiaowei.Zou Department of Biomedical Engineering Columbia University New York, NY, 10027 Cell: 203-506-6130