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You did nothing wrong.

Here is the logic of why they are equal:
1st (A >B) > 2nd (A >B) ===> (A1-B1) - (A2-B2) = 0
Now we can rearrange it... A1-B1-A2+B2=0, which can be expressed as
(B2-A2) - (B1-A1) ====> 2nd (B >A) > 1st (B >A)


Best Regards, Donald McLaren
=================
D.G. McLaren
University of Wisconsin - Madison
Neuroscience Training Program
Office: (608) 520-0586
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On Fri, Aug 6, 2010 at 11:34 AM, Andrew McReynolds <[log in to unmask]> wrote:
> Hello,
>
> We're having trouble running a paired t-test in SPM5.  In our design, we have two conditions, A and B, and for each subject, we generated contrasts for A > B and B > A.  We ran these subjects twice and want to compare 1st scan (A > B) > 2nd scan (A > B) and vice versa, so we used a paired t-test.  However,
> 1st (A >B) > 2nd (A >B) equalled 2nd (B >A) > 1st (B >A), and
> 1st (B > A) > 2nd (B > A) equalled 2nd (A > B) > 1st (A > B).
>
> Do you know what we did wrong?
>
> Thank you for any help.
>
> Andrew
>