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Hi, there have been many discussions in the past on whether rotating the bvecs makes a difference or not in the results, you can find them by searching the archive. As there is no clear benefit, the script is removed from FDT (at least it was intended to). Cheers, Stam On 27 Jul 2010, at 17:01, Torsten Ruest wrote: > Thanks for all your help, that was quite helpful! Yes I am aware of the corregistration issue regarding the bvecs, but so far there seems to be no solution, or is there? The script available was accidently made available on the FSL website, and I don't think there is any suggestion, if necessary at all, about how to overcome this problem, at least for the moment. > > Cheers, > > Torsten >