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hi, try isosurf: http://mi.eng.cam.ac.uk/~gmt11/software/isosurf/isosurf.html (it works with raw data volumes, like analyze) cheers, roberto On Mon, Jul 26, 2010 at 8:34 PM, Wayne Su <[log in to unmask]> wrote: > Thanks. The input is a binary mask. The bet only works for the whole brain, > not the mask. > Wayne > > > On 26/07/10 11:22 AM, "Paul Robinson" <[log in to unmask]> wrote: > > Hi, Wayne. > > Try bet -e -A. > > Cheers, > Paul > > On Mon, Jul 26, 2010 at 1:05 PM, Wayne Su <[log in to unmask]> wrote: > > Does anyone know the tool which can generate the surface mesh (also boundary > mask) from a 3D volumetric binary mask? Command-line tool is preferred. > Thanks. > Wayne > > >