 |
 |
On 12 Mar 2010, at 14:02, Miguel Burgaleta wrote: > Thanks Dave, you are right. I had to set the type of image in the normal view and then switch to 3d (setting it directly in 3d view didn't work). My fault. I'm still in the process of making the 3D view properly integrate so that you can make those changes anywhere. Sorry it makes things more difficult. > > Best, > Miguel > > > On Fri, Mar 12, 2010 at 2:28 AM, Dave Flitney <[log in to unmask]> wrote: > You probably need to set the data types, i.e., mask, stats etc. Then, when you switch to 3d view you should see all the layers as: in-plane coloured patches, surfaces, etc. > > Hope that helps. > > Dave Flitney, IT Manager > University of Oxford, FMRIB Centre > JR Hospital, Oxford OX3 9DU > T: 01865 222713 F: 01865 222717 > > > On 11 Mar 2010, at 19:33, Miguel Burgaleta <[log in to unmask]> wrote: > > Dear all, > > I am trying to render my FA template and then use the clipping box to select the plane where my statistical results are specially interesting. However, I can't see the latter, even though the image appears in the layer list. > > I applied TBSS and am able to successfully display my results (template + skeleton + thresholded p-map) as suggested in your website: > > fslview myFAemplate -b 0,600 mean_FA_skeleton.nii.gz -l Green -b 300,800 myFilled&thresholdedPmap -l Red-Yellow > > But, when I render, I can only see my template. Could anyone please say what I am doing wrong? > Thanks in advance! > > Miguel > -- Dave Flitney, IT Manager Oxford Centre for Functional MRI of the Brain E:[log in to unmask] W:+44-1865-222713 F:+44-1865-222717 URL: http://www.fmrib.ox.ac.uk/~flitney