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Hi Brian,

Sorry, I didn't notice your response until now. I am quite sorry. I think
maybe nobody responded to me.

Anyway, can you tell me how to check the registrations? What command lines
to use?

Best,
Xiaoying

2010/3/22 Brian Patenaude <[log in to unmask]>

> Hi,
>
> Have you checked the registrations?
>
> Cheers,
>
> Brian
>
>
>
> > Hi all,
> >
> >  I want to use FIRST to extract some structures such as caudate from a T1
> > skull-stripped image. I performed the following command lines. But the
> > results are obviously not caudate.
> >
> > Commands:
> >
> > /usr/local/fsl/bin/run_first_all -s L_Caud,R_Caud -i
> > amf_091201_10_1_john_ss
> > -o amf_first
> >
> >
> > "amf_091201_10_1_john_ss.img" is my input skull-stripped T1 image.
> >
> > I would be most grateful if someone can answer my problem.
> >
> > Best,
> > Xiaoying
> >
>