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Thank you very much. I will study the links you suggested. Ying -----Original Message----- From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf Of Cornelius Werner Sent: Wednesday, January 06, 2010 11:29 AM To: [log in to unmask] Subject: Re: [FSL] Brain lesion volume calculation i never did it myself, but people in my lab seem to use MRICro for this kind of stuff. There is also VoxBo. See here: http://www.voxbo.org/index.php/Lesion_analysis_FAQ and here: http://www.sph.sc.edu/comd/rorden/workshop/mricron/tutorial/index.html Cheers, Cornelius On Tue, Jan 5, 2010 at 10:35 PM, Ying Xiong <[log in to unmask]> wrote: > Dear All: > I am writing to ask you a favor. Do you know what kind of software that > researchers are using for brain lesion's calculation? What I want is to calculate > the lesion volume for a whole set of scan (for example T2 Flair). After I put > ROI around lesions on all slices, I can get a lesion volume report. Do you know > if any software can do this job? > Thanks a lot. > Ying > -- Dr. med. Cornelius J. Werner Department of Neurology RWTH Aachen University Pauwelsstr. 30 52074 Aachen Germany Institute of Neuroscience and Medicine MR Physics - INM4 Research Centre Juelich 52425 Juelich Germany ::: Please encrypt confidential data :::