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Looks as if you have SGE on your system but haven't configured fsl_sub to tell it which queues to use. Edit the script $FSLDIR/bin/fsl_sub so that the queues match those on your system. Dave Flitney, IT Manager University of Oxford, FMRIB Centre JR Hospital, Oxford OX3 9DU T: 01865 222713 F: 01865 222717 On 8 Oct 2009, at 05:25, Ankit Master <[log in to unmask]> wrote: > Hello, > > I am having issues using tbss_2_reg. > > I am trying to use FMRIB58_FA standard-space image as the target and > following is what I am typing at the command line > > tbss_2_reg -T > > and everytime when I try to run this from a folder which has two > subfolders > FA and orig, I end up getting an error. I am not sure if I am > suppose to > specify the input files !! > > > following is the error msg that I encounter. > > dti_vol_1_2_FA_FA_to_target > dti_vol_1_FA_FA_to_target > Unable to run job: Job was rejected because job requests unknown queue > "short.q". > > Any help will be greatly appreciated. > > Thank you in advance > > Sincerely, > Ankit Master >