fslhd circle/data.nii
filename circle/data.nii
sizeof_hdr 348
data_type INT16
dim0 4
dim1 50
dim2 50
dim3 10
dim4 66
dim5 1
dim6 1
dim7 1
vox_units Unknown
time_units Unknown
datatype 4
nbyper 2
bitpix 16
pixdim0 0.0000000000
pixdim1 1.7000000477
pixdim2 1.7000000477
pixdim3 1.7000000477
pixdim4 1.0000000000
pixdim5 1.0000000000
pixdim6 1.0000000000
pixdim7 1.0000000000
vox_offset 352
cal_max 0.0000
cal_min 0.0000
scl_slope 0.000000
scl_inter 0.000000
phase_dim 0
freq_dim 0
slice_dim 0
slice_name Unknown
slice_code 0
slice_start 0
slice_end 0
slice_duration 0.000000
time_offset 0.000000
intent Unknown
intent_code 0
intent_name
intent_p1 0.000000
intent_p2 0.000000
intent_p3 0.000000
qform_name Unknown
qform_code 0
qto_xyz:1 1.700000 0.000000 0.000000 0.000000
qto_xyz:2 0.000000 1.700000 0.000000 0.000000
qto_xyz:3 0.000000 0.000000 1.700000 0.000000
qto_xyz:4 0.000000 0.000000 0.000000 1.000000
qform_xorient Left-to-Right
qform_yorient Posterior-to-Anterior
qform_zorient Inferior-to-Superior
sform_name Scanner Anat
sform_code 1
sto_xyz:1 1.700000 0.000000 0.000000 1.700000
sto_xyz:2 0.000000 1.700000 0.000000 1.700000
sto_xyz:3 0.000000 0.000000 1.700000 1.700000
sto_xyz:4 0.000000 0.000000 0.000000 1.000000
sform_xorient Left-to-Right
sform_yorient Posterior-to-Anterior
sform_zorient Inferior-to-Superior
file_type NIFTI-1+
file_code 1
descrip
aux_file none
impe@impe-laptop:/daten/data/sphericalDeconvolution.C/synthetic_30$ fslhd circle.bedpostX/
bvals commands.txt logs/ nodif_brain_mask.nii
bvecs diff_slices/ monitor xfms/
impe@impe-laptop:/daten/data/sphericalDeconvolution.C/synthetic_30$ fslhd ../
b3000sp/ l.b1000sp2/ mario2500.bedpostX2/ synthetic_15/ synthetic.bedpostX/ vDir.txt
b3000ss/ l.b1000ss/ mario2500ss/ synthetic_30/ test1/
l.b1000/ mario2500/ mario2500ss.bedpostX/ synthetic_30b/ test3/
l.b1000sp/ mario2500.bedpostX/ synthetic/ synthetic_30.bedpostX/ tmp/
impe@impe-laptop:/daten/data/sphericalDeconvolution.C/synthetic_30$ fslhd ../synthetic_30.bedpostX/
** ERROR (nifti_image_read): failed to find header file for '../synthetic_30.bedpostX/'
** ERROR: nifti_image_open(../synthetic_30.bedpostX/): bad header info
Error: failed to open file ../synthetic_30.bedpostX/
ERROR: Could not open file
impe@impe-laptop:/daten/data/sphericalDeconvolution.C/synthetic_30$ fslhd ../synthetic_30.bedpostX/
bing_dyads1.nii.gz commands.txt logs/ mean_th1samples.nii.gz merged_ph2samples.nii.gz tractbing_7_2_4.nii.gz
bing_dyads2.nii.gz dyads1.nii.gz mean_f1samples.nii.gz mean_th2samples.nii.gz merged_th1samples.nii.gz xfms/
bing.nii.gz dyads2.nii.gz mean_f2samples.nii.gz merged_f1samples.nii.gz merged_th2samples.nii.gz
bvals fdt_7_1_4/ mean_ph1samples.nii.gz merged_f2samples.nii.gz monitor
bvecs fdt_7_2_4/ mean_ph2samples.nii.gz merged_ph1samples.nii.gz nodif_brain_mask.nii
synthetic_30$ fslhd ../circle.bedpostX/merged_ph1samples.nii.gz
filename ../circle.bedpostX/merged_ph1samples.nii.gz
sizeof_hdr 348
data_type FLOAT32
dim0 4
dim1 15
dim2 15
dim3 9
dim4 50
dim5 1
dim6 1
dim7 1
vox_units mm
time_units s
datatype 16
nbyper 4
bitpix 32
pixdim0 0.0000000000
pixdim1 1.7000000477
pixdim2 1.7000000477
pixdim3 1.7000000477
pixdim4 1.0000000000
pixdim5 0.0000000000
pixdim6 0.0000000000
pixdim7 0.0000000000
vox_offset 352
cal_max 0.0000
cal_min 0.0000
scl_slope 1.000000
scl_inter 0.000000
phase_dim 0
freq_dim 0
slice_dim 0
slice_name Unknown
slice_code 0
slice_start 0
slice_end 0
slice_duration 0.000000
time_offset 0.000000
intent Unknown
intent_code 0
intent_name
intent_p1 0.000000
intent_p2 0.000000
intent_p3 0.000000
qform_name Scanner Anat
qform_code 1
qto_xyz:1 1.700000 0.000000 0.000000 1.700000
qto_xyz:2 0.000000 1.700000 0.000000 1.700000
qto_xyz:3 0.000000 0.000000 1.700000 1.700000
qto_xyz:4 0.000000 0.000000 0.000000 1.000000
qform_xorient Left-to-Right
qform_yorient Posterior-to-Anterior
qform_zorient Inferior-to-Superior
sform_name Scanner Anat
sform_code 1
sto_xyz:1 1.700000 0.000000 0.000000 1.700000
sto_xyz:2 0.000000 1.700000 0.000000 1.700000
sto_xyz:3 0.000000 0.000000 1.700000 1.700000
sto_xyz:4 0.000000 0.000000 0.000000 1.000000
sform_xorient Left-to-Right
sform_yorient Posterior-to-Anterior
sform_zorient Inferior-to-Superior
file_type NIFTI-1+
file_code 1
descrip FSL4.0
aux_file
----- Original Message -----
From: Matt Glasser <[log in to unmask]>
Date: Sunday, October 4, 2009 4:09
Subject: Re: [FSL] Fwd: Re: [FSL] bedpostx - probtrack inconsitency
To: [log in to unmask]
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