Hi Steve
Hi - please see the recent reply to a similar query:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind0908&L=FSL&P=R11874&X=5181BB38EE3D0C56E6&Y=steve%40fmrib.ox.ac.uk
Cheers.---------------------------------------------------------------------------
On 15 Aug 2009, at 06:17, shih-Wei Wu wrote:
Dear all
we encountered an error msg while running 1st-level FEAT in our cluster:
Post-stats
/share/apps/fsl/bin/contrast_mgr stats design.con
** ERROR (nifti_image_read): failed to find header file for
'stats/sigmasquareds'
** ERROR: nifti_image_open(stats/sigmasquareds): bad header info
Error: failed to open file stats/sigmasquareds
ERROR: Could not open image stats/sigmasquareds
Image Exception : #22 :: Failed to read volume stats/sigmasquareds
However, when checking sigmasquareds under stats, sigmasquareds.nii.gz exists.
Other parts of FEAT (Prestats, Stats, Registration) ran fine.
We are testing how FSL runs in our cluster with torque as the scheduler.
Any idea what might cause this?
thanks!
shih-wei
Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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