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Did the GLM create any design.* files apart from the fsf? The -t  
option requires a filename for the contrasts ( e.g. <rootname>.con ).

Many Regards

Matthew

> Dear All,
> This is my first experience with TBSS analysis. I followed step by  
> step the instructions
> found on the web site with success until the last step where I have  
> to generate the
> design.mat and design.con files. I tried on the terminal to run the  
> Glm with no luck, so I
> used the GUI, I defined my contrasts and everything but when I  
> pressed save I could see
> only a design.fsf file, furthermore by trying the following:
> randomise -i all_FA_skeletonised -o tbss -m mean_FA_skeleton_mask -d  
> design.mat -t
>
> I got:
> -t: Missing non-optional argument!
> try: randomise --help
>
> Any help could be appreciated.
>
> P.S. I have some questions about the workflow of TBSS. For example  
> if I want to
> compare one patient each time with a group of normal controls, do I  
> have to repeat the
> steps from tbss_1_preproc ... to tbss_4_prestats for all the  
> subjects since the controls will
> be the same in multiple experiments.
>