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Dear Ping, According to this link, http://map.loni.ucla.edu/atlas/methods/2-data-acquisition/ They used T2W RARE-3D. Perhaps this paper answers your question better, Standard atlas space for C57BL/6J neonatal mouse brain. Lee EF, Jacobs RE, Dinov I, Leow A, Toga AW. Anat Embryol (Berl). 2005 Nov;210(4):245-63. Epub 2005 Nov 12. Hope this helps, Hedok WangPing wrote: > Dear Hedok, > > Great, thank you so much for the kind recommendations. > Sorry maybe I am wrong, I just browsed the the loni website, looks it > is not an MRI based template (for example normalize many mouse MRI > images and average them to produce the average tempate), is it > correct? Basically I want a MRI based template. > Thanks, > > Best Regards, > Ping > > > Date: Mon, 18 May 2009 20:59:53 -0400 > > From: [log in to unmask] > > Subject: Re: [FSL] mouse brain template > > To: [log in to unmask] > > > > Dear Ping, > > > > Here is one of places where you can actually download an atlas in > > ANALYZE format. > > http://www.bnl.gov/CTN/mouse/ > > > > Try this one too > > http://map.loni.ucla.edu/ > > > > Hope this helps, > > > > Hedok > > > > > > WangPing wrote: > > > dear experts: > > > > > > I am wondering if anyone can recommend a mouse brain atlas? > > > > > > Thanks, > > > Ping > > > > > > > ------------------------------------------------------------------------ > > > 更多热辣资讯尽在新版MSN首页！ 立刻访问！ <http://cn.msn.com/> > > ------------------------------------------------------------------------ > 立即试试微软地图新功能，msn互动浏览！ 立刻体验！ > <http://ditu.live.com/?form=CR>