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Hi, Those errors definitely indicate corrupt image files. I would run things again from the beginning if you are still seeing these errors. All the best, Mark On 8 May 2009, at 17:21, Jeremy Young wrote: >> Hello, >> >> Actually, after clearing up space and running again, I am getting >> the same error. Should I try running epidewarp.fsl again? >> >> Jeremy >> >> >> On May 8, 2009, at 10:02 AM, Jeremy Young wrote: >> >>> Hello, >>> >>> I forgot to include that. When I try to open dewarped it is fine. >>> >>> I figured out what was wrong just now though: I ran out of space >>> on the hard drive I was using. >>> >>> Jeremy >>> >>> >>> On May 7, 2009, at 4:24 PM, Matt Glasser wrote: >>> >>>> What happens if you open dewarped in FSLView? Do you get the >>>> same error? >>>> If so, I am afraid that file is corrupted. >>>> >>>> Peace, >>>> >>>> Matt. >>>> >>>> -----Original Message----- >>>> From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] >>>> On Behalf >>>> Of Jeremy Young >>>> Sent: Thursday, May 07, 2009 1:18 PM >>>> To: [log in to unmask] >>>> Subject: [FSL] eddy correct error >>>> >>>> Hello, >>>> >>>> I am trying to eddy correct an output from epidewarp.fsl. This >>>> has worked >>>> for all my other subjects, except for the curret one. Here is my >>>> command >>>> and the error message: >>>> eddy_correct dewarped.nii data 0 >>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz): >>>> data bytes needed = 3932160 >>>> data bytes input = 2306840 >>>> number missing = 1625320 (set to 0) >>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz): >>>> data bytes needed = 3932160 >>>> data bytes input = 0 >>>> number missing = 3932160 (set to 0) >>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz): >>>> data bytes needed = 3932160 >>>> data bytes input = 0 >>>> number missing = 3932160 (set to 0) >>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz): >>>> data bytes needed = 3932160 >>>> data bytes input = 0 >>>> number missing = 3932160 (set to 0) >>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz): >>>> data bytes needed = 3932160 >>>> data bytes input = 0 >>>> number missing = 3932160 (set to 0) >>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz): >>>> data bytes needed = 3932160 >>>> data bytes input = 0 >>>> number missing = 3932160 (set to 0) >>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz): >>>> data bytes needed = 3932160 >>>> data bytes input = 0 >>>> number missing = 3932160 (set to 0) >>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz): >>>> data bytes needed = 3932160 >>>> data bytes input = 0 >>>> number missing = 3932160 (set to 0) >>>> ++ WARNING: nifti_read_buffer(dewarped.nii.gz): >>>> data bytes needed = 3932160 >>>> data bytes input = 0 >>>> number missing = 3932160 (set to 0) >>>> etc. >>>> >>>> What does this mean? Would a simple restart fix this or is there >>>> something >>>> else that's wrong? >>>> >>>> Thanks! >>>> Jeremy >>>> >>>> >>> >> >