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Dear Mahinda, have you tried manually running one of these fnirt commands on one of your nodes. This could potentially be a fnirt problem (in which case you would have the same problem when running it manually) or an SGE problem, and it would be useful to know which it is. Best regards Jesper On 17 Mar 2009, at 12:50, Mahinda Yogarajah wrote: > Hi Steve and Other Expert Users, > > We (I and our local IT experts) have been tinkering for about a week > without > success. We are still having trouble getting our SGE to run the > tbss 2 > script (FNIRT) without eventually crashing and failing to complete > the job. > Our images our 128x128, and the machines should have enough RAM (4gb > with > 10 swap) to cope. We have also tried upgrading the SGE software, but > without success. I wonder whether anyone had any other suggestions ? > > Thanks in advance. > > Mahinda > > >