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Ah, run ccpnmr/bin/updateAll. Then Analysis should work (assuming that it does indeed find ShapeUtil, as it should). Wayne On Tue, 17 Mar 2009, Tozawa, Kaeko wrote: > When I type analysis, I still get the same traceback and Analysis doesn't run (I can see the python shell prompt >>>, but no Analysis menu bar) so I just exit by ctrl-D. What can I do to fix the problem?I appreciate your help. > > Kaeko > ________________________________________ > From: CcpNmr software mailing list [[log in to unmask]] On Behalf Of Wayne Boucher [[log in to unmask]] > Sent: 17 March 2009 19:46 > To: [log in to unmask] > Subject: Re: some updates > > Hello, > > I think the problem here is that there is a function findMatchingChains > that was added to MoleculeBasic but the latter seems not to have been > added to the update server, so I've done that now. But I'll also check > with Tim about this, just in case. (So now there is both a > findMatchingChain and a findMatchingChains in MoleculeBasic.) > > Wayne > > PS: Brian posted a follow-up which I responded to but unfortunately it > only went to him so I'm sending this now, but he will have seen this > already of course. > > On Tue, 17 Mar 2009, Brian Smith wrote: > >> Got this on upgrade. Something missing ? >> >> Traceback (most recent call last): >> File "/usr/local/ccpnmr/ccpnmr2.0/python/ccpnmr/analysis/AnalysisGui.py", >> line 81, in ? >> from ccpnmr.analysis.AnalysisPopup import AnalysisPopup >> File "/usr/local/ccpnmr/ccpnmr2.0/python/ccpnmr/analysis/AnalysisPopup.py", >> line 100, in ? >> from ccpnmr.analysis.popups.BrowseConstraints import >> BrowseConstraintsPopup >> File >> "/usr/local/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr2.0/python/ccpnmr/analysis/popups/BrowseConstraints.py", >> line 73, in ? >> File >> "/usr/local/ccpnmr/ccpnmr2.0/python/ccpnmr/analysis/core/StructureBasic.py", >> line 57, in ? >> from ccpnmr.analysis.core.MoleculeBasic import findMatchingChains, >> getLinkedResidue >> ImportError: cannot import name findMatchingChains >> >> >> Dr. Brian O. Smith ---------------------- B Smith at bio gla ac uk >> Division of Molecular & Cellular Biology, >> Faculty of Biomedical & Life Sciences, >> Joseph Black Building, University of Glasgow, Glasgow G12 8QQ, UK. >> Tel: 0141 330 5167/6459/3089 Fax: 0141 330 4600 >> ------------------------------------------------------------------- >> The University of Glasgow, charity number SC004401 >> >