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Hi Jan

Changes have been made to the Refmac interface in 6.1.1 which are not
backwardly compatible. This means that if you try to rerun an old refmac
job, it will give the error you see. The solution is to run a new refmac
job and fill in the input fields from scratch.

Norman Stein
CCP4

-----Original Message-----
From: CCP4 bulletin board [mailto:[log in to unmask]] On Behalf Of
Jan Abendroth
Sent: 06 March 2009 06:41
To: [log in to unmask]
Subject: [ccp4bb] ccp4i / refmac issue

Hi all,
I keep on getting the following error message when I try to start a
refmac job through ccp4i with ccp4 version 6.1.1. This initially only
happened in a linux installation, now all of a sudden appeared in a osx
installation as well. The interface hangs when starting the job.
It also occurs for files that refined w/o any problems before. Any ideas
what is going on here?

Thanks for any input.

Jan

~~~~~~~

Top level CCP4 directory is /usr/local/ccp4-6.1.1 Using CCP4 programs
from /usr/local/ccp4-6.1.1/bin can't set "ATOM(0)": variable isn't array
     while executing
"set [subst $root]([subst $indx0]) """
     (procedure "ExecuteScript" line 50)
     invoked from within
"ExecuteScript $system(SCRIPT)"
     ("script" arm line 8)
     invoked from within
"switch  $system(RUN_MODE) \
   script {

     source [file join $env(CCP4I_TOP) src execute.tcl]
     source [file join $env(CCP4I_TOP) src job_utils..."
     (file "/usr/local/ccp4-6.1.1/share/ccp4i/bin/ccp4ish.tcl" line 145)
     invoked from within
"source [file join $env(CCP4I_TOP) bin ccp4ish.tcl]"
     (file "/usr/local/bin/ccp4ish" line 12)

--
Jan Abendroth
deCODE biostructures
Seattle / Bainbridge Island WA, USA
work: JAbendroth_at_decode.is
home: Jan.Abendroth_at_gmail.com