You might want to echo your FSL path in terminal to see if it reflexes a right environment.
FSL processes NIFTI data. I threw into our clinical data as a trial when I started playing with it, and it worked fine.
Xuelin
****************************************
Xuelin Cui
Department of Electrical Engineering
University of Hawaii-Manoa
Honolulu HI 96822
Tel: 1-808-956-0856
Email: [log in to unmask]
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----- Original Message -----
From: SUBSCRIBE FSL Yan Shuai <[log in to unmask]>
Date: Tuesday, February 17, 2009 6:36
Subject: [FSL] Problems from a learner
To: [log in to unmask]
> Dear Sirs:
>
> I'm a new learner of FSL, and I'm now trying to begin to use FSL
> with the
> data from seeds. For Fdt, I want to know is it right to begin
> the processing
> pipeline from "data.nii.gz" from the fdt_subj1?
>
> P.S There's a more important question. I install the FSL under
> Linux, and
> when it's installed it seems working well, but once I shut down
> the computer
> and restart it ,I just can't run FSL through the terminal, I
> don't know how
> can I fix this problem.
>
> Thank you very much for your reply.
>
> Yan Shuai
