But if you do ldd on a program, you should see it, e.g. /xtal/ccp4_CVS/ccp4/bin$ ldd pdbset linux-vdso.so.1 => (0x00007fffcc3fd000) libccp4f.so => /xtal/ccp4_CVS/ccp4/lib/libccp4f.so (0x00007f66c150c000) libccp4c.so => /xtal/ccp4_CVS/ccp4/lib/libccp4c.so (0x00007f66c12de000) libmmdb.so => /xtal/ccp4_CVS/ccp4/lib/libmmdb.so (0x00007f66c0feb000) (truncated for brevity). You normally run ldd on the program, since running the program is when you want to resolve symbol references. I've never tried ldd on libraries before, but I get the same as you. libccp4f.so does use e.g. libmmdb (try e.g. nm libccp4f.so | grep mmdb) but the symbols don't need to be resolved at the library level. HTH Martyn On Thu, 2009-02-26 at 12:26 +0100, Justin Lecher wrote: > Hi all, > > hopefully reaches some devs who can help me. > > I try to build shared libs for ccp4 using the configure command > > ./configure \ > --onlylibs \ > --with-shared-libs \ > --with-fftw=/usr \ > --with-warnings \ > --disable-cctbx \ > --tmpdir="${TMPDIR}" \ > linux > > This should build the libs as shared libs and not statically linked. Am > I right? > But what I see is following > > $ ldd libccp4c.so > statically linked > > $ ldd libccp4f.so > statically linked > > ... > > Am I doing something wrong or is this a build system problem? I attach > the full build.log > > Thanks, > > justin > > > > > plain text document attachment (build.log) > [32;01m*[0m You need one of these Fortran Compilers: g77 gfortran ifc > [32;01m*[0m Installed are: gfortran ifort > >>> Unpacking source... > >>> Unpacking ccp4-6.1.1-core-src.tar.gz to /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work > [32;01m*[0m Applying upstream patches ... > [32;01m*[0m Done. > > [32;01m*[0m Applying Gentoo patches ... > [32;01m*[0m 6.1.1-dont-make-dirs-in-configure.patch ... > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m pass-clipper-enablevals.patch ... > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m 6.0.2-ppc-double-define-gerror.patch ... > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m 6.1.1-clipper-mmdbold-ggc-4.3.patch ... > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Done. > > [32;01m*[0m Using GNU config files from /usr/share/libtool > [32;01m*[0m Updating lib/ssm/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating lib/ccif/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating lib/fftw/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating lib/rxdispencer/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating lib/DiffractionImage/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating lib/clipper/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating src/pisa/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating src/rapper/gc7.0/libatomic_ops-1.2/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating src/rapper/gc7.0/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating src/rapper/libxml2/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating src/rapper/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/Mosflm/cbf/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/Mosflm/jpg/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/Mosflm/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/Rotgen/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/xdl_view/src/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/libjwc/libjwc_c/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/libjwc/libjwc_f/config.sub > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating lib/ssm/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating lib/ccif/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating lib/fftw/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating lib/rxdispencer/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating lib/DiffractionImage/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating lib/clipper/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating src/pisa/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating src/rapper/gc7.0/libatomic_ops-1.2/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating src/rapper/gc7.0/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating src/rapper/libxml2/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating src/rapper/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/Mosflm/cbf/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/Mosflm/jpg/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/Mosflm/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/Rotgen/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/xdl_view/src/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/libjwc/libjwc_c/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Updating x-windows/libjwc/libjwc_f/config.guess > [A[191C [34;01m[ [32;01mok[34;01m ][0m > >>> Source unpacked in /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work > >>> Compiling source in /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 ... > with_fftw='/usr' > srcdir bindir libdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > OK, setting up for a system type of `linux'... > > ! onlylibs build requested > ! > ! Only the libraries will be configured and built. > ! Configuration of x-windows programs, phaser and mapslicer > ! command library have been implicitly disabled. > ! (Some messages below regarding re-enabling these options > ! are likely to be misleading.) > > ! Using gnu fortran compiler. If you have an old fortran compiler, you may be better > ! off using f2c, see --with-f2c option. > > ! The x-windows programs will not be installed. > ! If you want the x-windows programs to be installed re-run > ! configure with the --enable-x flag. > > The CCIF library will be built and installed. > This has been tested on the most common systems, but if > you have problems, use the --disable-ccif flag. > > Installation of the CCTBX library has been suppressed. > Some functionality will be lost. > > Installation of Phaser has been suppressed. > > The LAPACK linear algebra package will be included in the installation. > Configure will search for existing LAPACK and BLAS libraries on > on your system - if a version of LAPACK is not found then the NetLib > version will be built for you automatically. > If you want NetLib LAPACK and BLAS to be used regardless of > system libraries then rerun configure using --with-netlib-lapack > > To disable inclusion of LAPACK, use the --disable-lapack flag > (This is not recommended as some programs will fail to build) > > Building of the CCP4i MapSlicer command library has been suppressed. > As a result you will not be able to use the MapSlicer viewer. > ! You have specified a non-default Fortran compiler (gfortran). > This probably only makes sense if you have made the appropriate > changes to the Fortran-C interface routines. > > testing linux ABI using: x86_64-pc-linux-gnu-gcc > $ 64-bit > > Testing Fortran90 support. > Fortran90 support confirmed (needed for latest Refmac and Molrep) > checking for ctime... > yes > > Testing command for running m4 (m4 -D_gfort=1) ... ok > > Running separate configure for CCIF library. > > Updating modification times for configuration files > Please wait... > ...done. > loading cache /tmp/28614.cache_file > > > CCCCCC CCCCCC IIII FFFFFFFFFF > CCCCCCCCCC CCCCCCCCCC IIII FFFFFFFFFF > CC C CC C II FF > CC CC II FF > CC CC II FFFFF > CC CC II FFFFF > CC CC II FF > CC C CC C II FF > CCCCCCCCCC CCCCCCCCC IIII FF > CCCCCC CCCCC IIII FF > ======================================================= > > Fortran programmers' tools for mmCIF > > checking host system type... x86_64-unknown-linux-gnu > checking for gcc... x86_64-pc-linux-gnu-gcc > checking whether the C compiler (x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC ) works... yes > checking whether the C compiler (x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC ) is a cross-compiler... no > checking whether we are using GNU C... yes > checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes > checking for ranlib... ranlib > checking for mawk... no > checking for gawk... gawk > checking for nm... /usr/bin/nm > checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E > checking for signal.h... yes > checking for time.h... yes > checking for standards.h... no > checking for assert.h... yes > checking for unistd.h... checking for unistd.h... yes > yes > checking for working const... yes > checking whether we are using intel C and therefore restrict... no > checking whether we are using intel C 700 and require __GNUC__... no > ------------------------------------------------- > Setting up system-dependent stuff > ------------------------------------------------- > > > checking for standards.h... (cached) no > checking for working non-fixed mmap... yes > ------------------------------------------------- > Regular expression package stuff > ------------------------------------------------- > checking for regex.h... yes > checking out regular expression package... ok > > ------------------------------------------------- > *** Configuring CCIF build for shared library *** > ------------------------------------------------- > > ------------------------------------------------- > Checking for certain archaic features > ------------------------------------------------- > > checking whether we need to define strerror... no > checking for old-style realloc... no > checking for old BSD sprintf... no > > updating cache /tmp/28614.cache_file > creating ./config.status > creating shlib.csh > creating shlib.sh > creating Makefile > > Returning to main configure. > > > ********* BLAS AND LAPACK CONFIGURATION *********** > > Warning: this option has not been extensively tested! > Please report problems to [log in to unmask] > > Guessing names for native/vendor LAPACK and/or BLAS libraries > on this system > Possible LAPACK library names for this system: > liblapack > > Searching for libraries with LAPACK and BLAS: > ...found LAPACK library: /usr/lib64/liblapack.a > Testing: try to link library against test program > gfortran -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC -o testlink testlink.f -L/usr/lib64 -llapack > Link ok - using liblapack from /usr/lib64 > > * Checking whether we need a separate BLAS library * > Testing: try linking library against test program > gfortran -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC -o testlsame lsametst.f -L/usr/lib64 -llapack > Test program okay - additional separate BLAS not required > Test C linking for lapack library > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -o testlink testlink.c -L/usr/lib64 -llapack > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/temp/cc3D2jM3.o: In function `main': > testlink.c:(.text+0x84): undefined reference to `dsyev' > collect2: ld returned 1 exit status > > Linking in LAPACK/BLAS using XLAPACK_LIB="-L/usr/lib64 -llapack" > > ***** BLAS AND LAPACK CONFIGURATION FINISHED ******* > > ********* CLIPPER CONFIGURATION *********** > > Updating modification times for configuration files > Please wait... > ...done. > > configure --enable-shared=yes --with-fftw=/usr FFTW_LIBS="-L/usr/lib -lsrfftw -lsfftw" FFTW_CXXFLAGS="-I/usr/include" --with-mmdb=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --with-ccp4=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --enable-mmdb --enable-cif --enable-ccp4 --enable-minimol --enable-mmdbold --enable-mtz --with-mccp4=/usr --exec_prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --bindir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin --libdir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > checking for a BSD-compatible install... /usr/bin/install -c > checking whether build environment is sane... yes > checking for gawk... gawk > checking whether make sets $(MAKE)... yes > checking build system type... x86_64-unknown-linux-gnu > checking host system type... x86_64-unknown-linux-gnu > checking for style of include used by make... GNU > checking for gcc... x86_64-pc-linux-gnu-gcc > checking for C compiler default output file name... a.out > checking whether the C compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... o > checking whether we are using the GNU C compiler... yes > checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes > checking for x86_64-pc-linux-gnu-gcc option to accept ANSI C... none needed > checking dependency style of x86_64-pc-linux-gnu-gcc... gcc3 > checking for a sed that does not truncate output... /bin/sed > checking for egrep... grep -E > checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes > checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r > checking for BSD-compatible nm... /usr/bin/nm -B > checking whether ln -s works... yes > checking how to recognize dependent libraries... pass_all > checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E > checking for ANSI C header files... yes > checking for sys/types.h... yes > checking for sys/stat.h... yes > checking for stdlib.h... yes > checking for string.h... yes > checking for memory.h... yes > checking for strings.h... yes > checking for inttypes.h... yes > checking for stdint.h... yes > checking for unistd.h... yes > checking dlfcn.h usability... yes > checking dlfcn.h presence... yes > checking for dlfcn.h... yes > checking whether we are using the GNU C++ compiler... yes > checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes > checking dependency style of x86_64-pc-linux-gnu-g++... gcc3 > checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E > checking whether we are using the GNU Fortran 77 compiler... yes > checking whether gfortran accepts -g... yes > checking the maximum length of command line arguments... 1572864 > checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok > checking for objdir... .libs > checking for ar... ar > checking for ranlib... ranlib > checking for strip... strip > checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no > checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes > checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking whether -lc should be explicitly linked in... no > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > checking whether stripping libraries is possible... yes > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... yes > checking whether to build static libraries... yes > configure: creating libtool > appending configuration tag "CXX" to libtool > checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes > checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > appending configuration tag "F77" to libtool > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... yes > checking whether to build static libraries... yes > checking for gfortran option to produce PIC... -fPIC > checking if gfortran PIC flag -fPIC works... yes > checking if gfortran static flag -static works... yes > checking if gfortran supports -c -o file.o... yes > checking whether the gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > checking whether to enable maintainer-specific portions of Makefiles... no > checking whether we are using the GNU C++ compiler... (cached) yes > checking whether x86_64-pc-linux-gnu-g++ accepts -g... (cached) yes > checking dependency style of x86_64-pc-linux-gnu-g++... (cached) gcc3 > checking whether we are using the GNU C compiler... (cached) yes > checking whether x86_64-pc-linux-gnu-gcc accepts -g... (cached) yes > checking for x86_64-pc-linux-gnu-gcc option to accept ANSI C... (cached) none needed > checking dependency style of x86_64-pc-linux-gnu-gcc... (cached) gcc3 > checking for ANSI C header files... (cached) yes > checking for a BSD-compatible install... /usr/bin/install -c > checking for sqrt in -lm... yes > checking for CMMDBManager in MMDB... no > configure: WARNING: assuming library -lmmdb headers -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src > checking for ccp4_errno in CCP4... no > configure: WARNING: assuming library -L/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -lccp4c headers -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src > checking for floor... yes > checking for pow... yes > checking for rint... yes > checking for sqrt... yes > checking whether time.h and sys/time.h may both be included... yes > checking utime.h usability... yes > checking utime.h presence... yes > checking for utime.h... yes > checking for struct utimbuf... yes > configure: creating ./config.status > config.status: creating Makefile > config.status: creating clipper/Makefile > config.status: creating clipper/cctbx/Makefile > config.status: creating clipper/ccp4/Makefile > config.status: creating clipper/contrib/Makefile > config.status: creating clipper/core/Makefile > config.status: creating clipper/mmdb/Makefile > config.status: creating clipper/mmdbold/Makefile > config.status: creating clipper/minimol/Makefile > config.status: creating clipper/phs/Makefile > config.status: creating clipper/cif/Makefile > config.status: creating clipper/cns/Makefile > config.status: creating clipper/fortran/Makefile > config.status: creating examples/Makefile > config.status: creating clipper-config > config.status: creating macros/Makefile > config.status: creating dox/Makefile > config.status: creating config.h > config.status: executing depfiles commands > > Configuration Summary > ------------------------------ > core: yes > contrib: yes > phs: yes > cns: yes > mmdb: yes > mmdbold: yes > minimol: yes > cif: yes > ccp4: yes > cctbx: no > fortran: no > > > ***** CLIPPER CONFIGURATION FINISHED ******* > > > ********* DIFFRACTION IMAGE LIBRARY CONFIGURATION *********** > > Updating modification times for configuration files > Please wait... > ...done. > > configure --exec_prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --bindir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin --libdir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib --with-tcl-module --with-pic > checking for a BSD-compatible install... /usr/bin/install -c > checking whether build environment is sane... yes > checking for a thread-safe mkdir -p... /bin/mkdir -p > checking for gawk... gawk > checking whether make sets $(MAKE)... yes > checking build system type... x86_64-unknown-linux-gnu > checking host system type... x86_64-unknown-linux-gnu > checking for style of include used by make... GNU > checking for gcc... x86_64-pc-linux-gnu-gcc > checking for C compiler default output file name... a.out > checking whether the C compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... o > checking whether we are using the GNU C compiler... yes > checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes > checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed > checking dependency style of x86_64-pc-linux-gnu-gcc... gcc3 > checking for a sed that does not truncate output... /bin/sed > checking for grep that handles long lines and -e... /bin/grep > checking for egrep... /bin/grep -E > checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes > checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r > checking for BSD-compatible nm... /usr/bin/nm -B > checking whether ln -s works... yes > checking how to recognize dependent libraries... pass_all > checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E > checking for ANSI C header files... yes > checking for sys/types.h... yes > checking for sys/stat.h... yes > checking for stdlib.h... yes > checking for string.h... yes > checking for memory.h... yes > checking for strings.h... yes > checking for inttypes.h... yes > checking for stdint.h... yes > checking for unistd.h... yes > checking dlfcn.h usability... yes > checking dlfcn.h presence... yes > checking for dlfcn.h... yes > checking whether we are using the GNU C++ compiler... yes > checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes > checking dependency style of x86_64-pc-linux-gnu-g++... gcc3 > checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E > checking whether we are using the GNU Fortran 77 compiler... yes > checking whether gfortran accepts -g... yes > checking the maximum length of command line arguments... 1572864 > checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok > checking for objdir... .libs > checking for ar... ar > checking for ranlib... ranlib > checking for strip... strip > checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no > checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes > checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking whether -lc should be explicitly linked in... no > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > checking whether stripping libraries is possible... yes > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... yes > checking whether to build static libraries... yes > configure: creating libtool > appending configuration tag "CXX" to libtool > checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes > checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > appending configuration tag "F77" to libtool > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... yes > checking whether to build static libraries... yes > checking for gfortran option to produce PIC... -fPIC > checking if gfortran PIC flag -fPIC works... yes > checking if gfortran static flag -static works... yes > checking if gfortran supports -c -o file.o... yes > checking whether the gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > checking whether we are using the GNU C++ compiler... (cached) yes > checking whether x86_64-pc-linux-gnu-g++ accepts -g... (cached) yes > checking dependency style of x86_64-pc-linux-gnu-g++... (cached) gcc3 > checking for gcc... (cached) x86_64-pc-linux-gnu-gcc > checking whether we are using the GNU C compiler... (cached) yes > checking whether x86_64-pc-linux-gnu-gcc accepts -g... (cached) yes > checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... (cached) none needed > checking dependency style of x86_64-pc-linux-gnu-gcc... (cached) gcc3 > checking whether make sets $(MAKE)... (cached) yes > checking for ANSI C header files... (cached) yes > checking for python... python > checking /usr/include/python2.5/Python.h usability... yes > checking /usr/include/python2.5/Python.h presence... yes > checking for /usr/include/python2.5/Python.h... yes > checking tcl.h usability... yes > checking tcl.h presence... yes > checking for tcl.h... yes > checking /home/justin/.gentoo/java-config-2/current-user-vm/include/jni.h usability... yes > checking /home/justin/.gentoo/java-config-2/current-user-vm/include/jni.h presence... yes > checking for /home/justin/.gentoo/java-config-2/current-user-vm/include/jni.h... yes > checking for sqrt in -lm... yes > configure: creating ./config.status > config.status: creating Makefile > config.status: creating CBFlib/Makefile > config.status: creating CBFlib/src/Makefile > config.status: creating MAR/Makefile > config.status: creating Rigaku/Makefile > config.status: creating Bruker/Makefile > config.status: creating jpg/Makefile > config.status: executing depfiles commands > > ***** DIFFRACTION IMAGE LIBRARY CONFIGURATION FINISHED ******* > > > ********* SSM CONFIGURATION *********** > > Updating modification times for configuration files > Please wait... > ...done. > > configure --enable-shared=yes --with-mmdb=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --exec_prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --bindir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin --libdir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > checking for a BSD-compatible install... /usr/bin/install -c > checking whether build environment is sane... yes > checking for gawk... gawk > checking whether make sets $(MAKE)... yes > checking build system type... x86_64-unknown-linux-gnu > checking host system type... x86_64-unknown-linux-gnu > checking for style of include used by make... GNU > checking for gcc... x86_64-pc-linux-gnu-gcc > checking for C compiler default output file name... a.out > checking whether the C compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... o > checking whether we are using the GNU C compiler... yes > checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes > checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed > checking dependency style of x86_64-pc-linux-gnu-gcc... gcc3 > checking for a sed that does not truncate output... /bin/sed > checking for grep that handles long lines and -e... /bin/grep > checking for egrep... /bin/grep -E > checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes > checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r > checking for BSD-compatible nm... /usr/bin/nm -B > checking whether ln -s works... yes > checking how to recognize dependent libraries... pass_all > checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E > checking for ANSI C header files... yes > checking for sys/types.h... yes > checking for sys/stat.h... yes > checking for stdlib.h... yes > checking for string.h... yes > checking for memory.h... yes > checking for strings.h... yes > checking for inttypes.h... yes > checking for stdint.h... yes > checking for unistd.h... yes > checking dlfcn.h usability... yes > checking dlfcn.h presence... yes > checking for dlfcn.h... yes > checking whether we are using the GNU C++ compiler... yes > checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes > checking dependency style of x86_64-pc-linux-gnu-g++... gcc3 > checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E > checking whether we are using the GNU Fortran 77 compiler... yes > checking whether gfortran accepts -g... yes > checking the maximum length of command line arguments... 1572864 > checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok > checking for objdir... .libs > checking for ar... ar > checking for ranlib... ranlib > checking for strip... strip > checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no > checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes > checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking whether -lc should be explicitly linked in... no > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > checking whether stripping libraries is possible... yes > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... yes > checking whether to build static libraries... yes > configure: creating libtool > appending configuration tag "CXX" to libtool > checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes > checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > appending configuration tag "F77" to libtool > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... yes > checking whether to build static libraries... yes > checking for gfortran option to produce PIC... -fPIC > checking if gfortran PIC flag -fPIC works... yes > checking if gfortran static flag -static works... yes > checking if gfortran supports -c -o file.o... yes > checking whether the gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > checking whether to enable maintainer-specific portions of Makefiles... no > checking whether we are using the GNU C++ compiler... (cached) yes > checking whether x86_64-pc-linux-gnu-g++ accepts -g... (cached) yes > checking dependency style of x86_64-pc-linux-gnu-g++... (cached) gcc3 > checking for ANSI C header files... (cached) yes > checking for a BSD-compatible install... /usr/bin/install -c > checking for CMMDBManager in MMDB... no > configure: WARNING: assuming library -L/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -lmmdb headers -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb > checking for floor... yes > checking for pow... yes > checking for rint... yes > checking for sqrt... yes > checking for sqrt in -lm... yes > configure: creating ./config.status > config.status: creating Makefile > config.status: executing depfiles commands > > ***** SSM CONFIGURATION FINISHED ******* > > > ********* RAPPER CONFIGURATION *********** > > Updating modification times for configuration files > Please wait... > ...done. > > configure --enable-shared=yes --exec_prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --bindir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin --libdir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib --disable-shared > checking for a BSD-compatible install... /usr/bin/install -c > checking whether build environment is sane... yes > checking for gawk... gawk > checking whether make sets $(MAKE)... yes > checking for C++ compiler default output file name... a.out > checking whether the C++ compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... o > checking whether we are using the GNU C++ compiler... yes > checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes > checking for style of include used by make... GNU > checking dependency style of x86_64-pc-linux-gnu-g++... gcc3 > checking for gcc... x86_64-pc-linux-gnu-gcc > checking whether we are using the GNU C compiler... yes > checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes > checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed > checking dependency style of x86_64-pc-linux-gnu-gcc... gcc3 > checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E > checking for grep that handles long lines and -e... /bin/grep > checking for egrep... /bin/grep -E > checking for ANSI C header files... yes > checking for sys/types.h... yes > checking for sys/stat.h... yes > checking for stdlib.h... yes > checking for string.h... yes > checking for memory.h... yes > checking for strings.h... yes > checking for inttypes.h... yes > checking for stdint.h... yes > checking for unistd.h... yes > checking bstring.h usability... no > checking bstring.h presence... no > checking for bstring.h... no > checking build system type... x86_64-unknown-linux-gnu > checking host system type... x86_64-unknown-linux-gnu > checking for a sed that does not truncate output... /bin/sed > checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes > checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r > checking for BSD-compatible nm... /usr/bin/nm -B > checking whether ln -s works... yes > checking how to recognise dependent libraries... file_magic ELF [0-9][0-9]*-bit [LM]SB (shared object|dynamic lib ) > checking dlfcn.h usability... yes > checking dlfcn.h presence... yes > checking for dlfcn.h... yes > checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E > checking whether we are using the GNU Fortran 77 compiler... yes > checking whether gfortran accepts -g... yes > checking the maximum length of command line arguments... 32768 > checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok > checking for objdir... .libs > checking for ar... ar > checking for ranlib... ranlib > checking for strip... strip > checking for file... /usr/bin/file > checking if x86_64-pc-linux-gnu-gcc static flag works... yes > checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no > checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking how to hardcode library paths into programs... immediate > checking whether stripping libraries is possible... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... no > checking whether to build static libraries... yes > configure: creating libtool > appending configuration tag "CXX" to libtool > checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... no > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking how to hardcode library paths into programs... immediate > checking whether stripping libraries is possible... yes > checking dynamic linker characteristics... GNU/Linux ld.so > appending configuration tag "F77" to libtool > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... no > checking whether to build static libraries... yes > checking for gfortran option to produce PIC... -fPIC > checking if gfortran PIC flag -fPIC works... yes > checking if gfortran supports -c -o file.o... yes > checking whether the gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking how to hardcode library paths into programs... immediate > checking whether stripping libraries is possible... yes > checking dynamic linker characteristics... GNU/Linux ld.so > configure: creating ./config.status > config.status: creating Makefile > config.status: WARNING: Makefile.in seems to ignore the --datarootdir setting > config.status: creating LOOP/Makefile > config.status: WARNING: LOOP/Makefile.in seems to ignore the --datarootdir setting > config.status: creating data/Makefile > config.status: WARNING: data/Makefile.in seems to ignore the --datarootdir setting > config.status: executing depfiles commands > === configuring in gc7.0 (/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/src/rapper/gc7.0) > configure: running /bin/sh ./configure '--prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1' '--enable-shared=yes' '--exec_prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1' '--bindir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin' '--libdir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib' '--disable-shared' 'CXX=x86_64-pc-linux-gnu-g++' 'CXXFLAGS=-O2 -march=core2 -pipe -fomit-frame-pointer -fPIC' 'CC=x86_64-pc-linux-gnu-gcc' 'CFLAGS=-O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC' 'F77=gfortran' 'FFLAGS=-O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC' --cache-file=/dev/null --srcdir=. > checking build system type... x86_64-unknown-linux-gnu > checking host system type... x86_64-unknown-linux-gnu > checking target system type... x86_64-unknown-linux-gnu > checking GC version numbers... major=7 minor=0 > checking for a BSD-compatible install... /usr/bin/install -c > checking whether build environment is sane... yes > checking for gawk... gawk > checking whether make sets $(MAKE)... yes > checking whether to enable maintainer-specific portions of Makefiles... no > checking for style of include used by make... GNU > checking for gcc... x86_64-pc-linux-gnu-gcc > checking for C compiler default output file name... a.out > checking whether the C compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... o > checking whether we are using the GNU C compiler... yes > checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes > checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed > checking dependency style of x86_64-pc-linux-gnu-gcc... gcc3 > checking whether x86_64-pc-linux-gnu-gcc and cc understand -c and -o together... yes > checking whether we are using the GNU C++ compiler... yes > checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes > checking dependency style of x86_64-pc-linux-gnu-g++... gcc3 > checking for ar... ar > checking for ranlib... ranlib > checking for a BSD-compatible install... /usr/bin/install -c > checking for thread model used by GCC... posix > configure: WARNING: "Explict GC_INIT() calls may be required." > checking for xlc... no > checking for dlopen in -ldl... yes > checking whether to build shared libraries... yes > checking which machine-dependent code should be used... > checking for a sed that does not truncate output... /bin/sed > checking for grep that handles long lines and -e... /bin/grep > checking for egrep... /bin/grep -E > checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes > checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r > checking for BSD-compatible nm... /usr/bin/nm -B > checking whether ln -s works... yes > checking how to recognise dependent libraries... pass_all > checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E > checking for ANSI C header files... yes > checking for sys/types.h... yes > checking for sys/stat.h... yes > checking for stdlib.h... yes > checking for string.h... yes > checking for memory.h... yes > checking for strings.h... yes > checking for inttypes.h... yes > checking for stdint.h... yes > checking for unistd.h... yes > checking dlfcn.h usability... yes > checking dlfcn.h presence... yes > checking for dlfcn.h... yes > checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E > checking whether we are using the GNU Fortran 77 compiler... yes > checking whether gfortran accepts -g... yes > checking the maximum length of command line arguments... 32768 > checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok > checking for objdir... .libs > checking for ar... (cached) ar > checking for ranlib... (cached) ranlib > checking for strip... strip > checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no > checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes > checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > checking whether stripping libraries is possible... yes > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... no > checking whether to build static libraries... yes > configure: creating libtool > appending configuration tag "CXX" to libtool > checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes > checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > appending configuration tag "F77" to libtool > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... no > checking whether to build static libraries... yes > checking for gfortran option to produce PIC... -fPIC > checking if gfortran PIC flag -fPIC works... yes > checking if gfortran static flag -static works... yes > checking if gfortran supports -c -o file.o... yes > checking whether the gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > checking sys/dg_sys_info.h usability... no > checking sys/dg_sys_info.h presence... no > checking for sys/dg_sys_info.h... no > checking whether Solaris gcc optimization fix is necessary... no > checking atomic_ops.h usability... no > checking atomic_ops.h presence... no > checking for atomic_ops.h... no > configure: Using internal version of libatomic_ops > configure: creating ./config.status > config.status: creating Makefile > config.status: creating bdw-gc.pc > config.status: executing depfiles commands > config.status: executing default commands > === configuring in libatomic_ops (/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/src/rapper/gc7.0/libatomic_ops) > configure: running /bin/sh ./configure '--prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1' '--enable-shared=yes' '--exec_prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1' '--bindir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin' '--libdir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib' '--disable-shared' 'CXX=x86_64-pc-linux-gnu-g++' 'CXXFLAGS=-O2 -march=core2 -pipe -fomit-frame-pointer -fPIC' 'CC=x86_64-pc-linux-gnu-gcc' 'CFLAGS=-O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC' 'F77=gfortran' 'FFLAGS=-O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC' --cache-file=/dev/null --srcdir=. > checking build system type... x86_64-unknown-linux-gnu > checking host system type... x86_64-unknown-linux-gnu > checking target system type... x86_64-unknown-linux-gnu > checking for a BSD-compatible install... /usr/bin/install -c > checking whether build environment is sane... yes > checking for gawk... gawk > checking whether make sets $(MAKE)... yes > checking for ranlib... ranlib > checking for gcc... x86_64-pc-linux-gnu-gcc > checking for C compiler default output file name... a.out > checking whether the C compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... o > checking whether we are using the GNU C compiler... yes > checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes > checking for x86_64-pc-linux-gnu-gcc option to accept ANSI C... none needed > checking for style of include used by make... GNU > checking dependency style of x86_64-pc-linux-gnu-gcc... gcc3 > checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E > checking for egrep... grep -E > checking for ANSI C header files... yes > checking for sys/types.h... yes > checking for sys/stat.h... yes > checking for stdlib.h... yes > checking for string.h... yes > checking for memory.h... yes > checking for strings.h... yes > checking for inttypes.h... yes > checking for stdint.h... yes > checking for unistd.h... yes > checking for stdlib.h... (cached) yes > checking for unistd.h... (cached) yes > checking for getpagesize... yes > checking for working mmap... yes > checking for ANSI C header files... (cached) yes > checking Determining PIC compiler flag... -fPIC > configure: creating ./config.status > config.status: creating Makefile > config.status: creating src/Makefile > config.status: creating src/atomic_ops/Makefile > config.status: creating src/atomic_ops/sysdeps/Makefile > config.status: creating doc/Makefile > config.status: creating tests/Makefile > config.status: creating src/config.h > config.status: executing depfiles commands > config.status: executing default commands > === configuring in libxml2 (/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/src/rapper/libxml2) > configure: running /bin/sh ./configure '--prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1' '--enable-shared=yes' '--exec_prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1' '--bindir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin' '--libdir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib' '--disable-shared' 'CXX=x86_64-pc-linux-gnu-g++' 'CXXFLAGS=-O2 -march=core2 -pipe -fomit-frame-pointer -fPIC' 'CC=x86_64-pc-linux-gnu-gcc' 'CFLAGS=-O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC' 'F77=gfortran' 'FFLAGS=-O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC' --cache-file=/dev/null --srcdir=. > checking build system type... x86_64-unknown-linux-gnu > checking host system type... x86_64-unknown-linux-gnu > checking for a BSD-compatible install... /usr/bin/install -c > checking whether build environment is sane... yes > checking for gawk... gawk > checking whether make sets $(MAKE)... yes > checking for gcc... x86_64-pc-linux-gnu-gcc > checking for C compiler default output file name... a.out > checking whether the C compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... o > checking whether we are using the GNU C compiler... yes > checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes > checking for x86_64-pc-linux-gnu-gcc option to accept ANSI C... none needed > checking for style of include used by make... GNU > checking dependency style of x86_64-pc-linux-gnu-gcc... gcc3 > checking for a BSD-compatible install... /usr/bin/install -c > checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E > checking for rm... /bin/rm > checking for mv... /bin/mv > checking for tar... /bin/tar > checking for perl... /usr/bin/perl > checking for xmllint... /usr/bin/xmllint > checking for xsltproc... /usr/bin/xsltproc > checking for function prototypes... yes > checking for egrep... grep -E > checking for ANSI C header files... yes > checking for sys/types.h... yes > checking for sys/stat.h... yes > checking for stdlib.h... yes > checking for string.h... yes > checking for memory.h... yes > checking for strings.h... yes > checking for inttypes.h... yes > checking for stdint.h... yes > checking for unistd.h... yes > checking for string.h... (cached) yes > checking for a sed that does not truncate output... /bin/sed > checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes > checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r > checking for BSD-compatible nm... /usr/bin/nm -B > checking whether ln -s works... yes > checking how to recognise dependent libraries... pass_all > checking dlfcn.h usability... yes > checking dlfcn.h presence... yes > checking for dlfcn.h... yes > checking whether we are using the GNU C++ compiler... yes > checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes > checking dependency style of x86_64-pc-linux-gnu-g++... gcc3 > checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E > checking whether we are using the GNU Fortran 77 compiler... yes > checking whether gfortran accepts -g... yes > checking the maximum length of command line arguments... 32768 > checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok > checking for objdir... .libs > checking for ar... ar > checking for ranlib... ranlib > checking for strip... strip > checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no > checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes > checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > checking whether stripping libraries is possible... yes > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... no > checking whether to build static libraries... yes > configure: creating libtool > appending configuration tag "CXX" to libtool > checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 > checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC > checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC works... yes > checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes > checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes > checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > appending configuration tag "F77" to libtool > checking if libtool supports shared libraries... yes > checking whether to build shared libraries... no > checking whether to build static libraries... yes > checking for gfortran option to produce PIC... -fPIC > checking if gfortran PIC flag -fPIC works... yes > checking if gfortran static flag -static works... yes > checking if gfortran supports -c -o file.o... yes > checking whether the gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes > checking dynamic linker characteristics... GNU/Linux ld.so > checking how to hardcode library paths into programs... immediate > Checking zlib > checking zlib.h usability... yes > checking zlib.h presence... yes > checking for zlib.h... yes > checking for gzread in -lz... yes > Checking headers > checking for dirent.h that defines DIR... yes > checking for library containing opendir... none required > checking for ANSI C header files... (cached) yes > checking fcntl.h usability... yes > checking fcntl.h presence... yes > checking for fcntl.h... yes > checking for unistd.h... (cached) yes > checking ctype.h usability... yes > checking ctype.h presence... yes > checking for ctype.h... yes > checking dirent.h usability... yes > checking dirent.h presence... yes > checking for dirent.h... yes > checking errno.h usability... yes > checking errno.h presence... yes > checking for errno.h... yes > checking malloc.h usability... yes > checking malloc.h presence... yes > checking for malloc.h... yes > checking stdarg.h usability... yes > checking stdarg.h presence... yes > checking for stdarg.h... yes > checking for sys/stat.h... (cached) yes > checking for sys/types.h... (cached) yes > checking time.h usability... yes > checking time.h presence... yes > checking for time.h... yes > checking ansidecl.h usability... yes > checking ansidecl.h presence... yes > checking for ansidecl.h... yes > checking ieeefp.h usability... no > checking ieeefp.h presence... no > checking for ieeefp.h... no > checking nan.h usability... no > checking nan.h presence... no > checking for nan.h... no > checking math.h usability... yes > checking math.h presence... yes > checking for math.h... yes > checking limits.h usability... yes > checking limits.h presence... yes > checking for limits.h... yes > checking fp_class.h usability... no > checking fp_class.h presence... no > checking for fp_class.h... no > checking float.h usability... yes > checking float.h presence... yes > checking for float.h... yes > checking for stdlib.h... (cached) yes > checking for sys/socket.h... yes > checking for netinet/in.h... yes > checking for arpa/inet.h... yes > checking netdb.h usability... yes > checking netdb.h presence... yes > checking for netdb.h... yes > checking sys/time.h usability... yes > checking sys/time.h presence... yes > checking for sys/time.h... yes > checking sys/select.h usability... yes > checking sys/select.h presence... yes > checking for sys/select.h... yes > checking sys/mman.h usability... yes > checking sys/mman.h presence... yes > checking for sys/mman.h... yes > checking sys/timeb.h usability... yes > checking sys/timeb.h presence... yes > checking for sys/timeb.h... yes > checking signal.h usability... yes > checking signal.h presence... yes > checking for signal.h... yes > checking for arpa/nameser.h... yes > checking for resolv.h... yes > checking dl.h usability... no > checking dl.h presence... no > checking for dl.h... no > checking for dlfcn.h... (cached) yes > Checking libraries > checking for strftime... yes > checking for strdup... yes > checking for strndup... yes > checking for strerror... yes > checking for finite... yes > checking for isnand... no > checking for fp_class... no > checking for class... no > checking for fpclass... no > checking for strftime... (cached) yes > checking for localtime... yes > checking for gettimeofday... yes > checking for ftime... yes > checking for stat... yes > checking for _stat... no > checking for signal... yes > checking for printf... yes > checking for sprintf... yes > checking for fprintf... yes > checking for snprintf... yes > checking for vfprintf... yes > checking for vsprintf... yes > checking for vsnprintf... yes > checking for sscanf... yes > checking for va_copy... yes > checking for library containing gethostent... none required > checking for library containing setsockopt... none required > checking for library containing connect... none required > checking for type of socket length (socklen_t)... socklen_t * > checking whether to enable IPv6... yes > checking struct sockaddr::ss_family... yes > checking for getaddrinfo... yes > checking for isnan... yes > checking for isinf... yes > checking for python... /usr/bin/python > Found Python version 2.5 > checking for shl_load... no > checking for shl_load in -ldld... no > checking for dlopen... no > checking for dlopen in -ldl... yes > Checking configuration requirements > Enabling multithreaded support > checking pthread.h usability... yes > checking pthread.h presence... yes > checking for pthread.h... yes > checking for pthread_join in -lpthread... yes > checking iconv.h usability... yes > checking iconv.h presence... yes > checking for iconv.h... yes > checking for iconv... yes > Enabled Schematron support > Enabled Schemas/Relax-NG support > configure: creating ./config.status > config.status: creating libxml2.spec > config.status: creating Makefile > config.status: creating include/Makefile > config.status: creating include/libxml/Makefile > config.status: creating doc/Makefile > config.status: creating doc/examples/Makefile > config.status: creating doc/devhelp/Makefile > config.status: creating example/Makefile > config.status: creating python/Makefile > config.status: creating python/tests/Makefile > config.status: creating xstc/Makefile > config.status: creating include/libxml/xmlversion.h > config.status: creating xml2-config > config.status: creating libxml-2.0.pc > config.status: creating libxml-2.0-uninstalled.pc > config.status: creating python/setup.py > config.status: creating config.h > config.status: executing depfiles commands > Done configuring > > ***** RAPPER CONFIGURATION FINISHED ******* > > > ********* PISA CONFIGURATION *********** > > Updating modification times for configuration files > Please wait... > ...done. > > configure --enable-shared=yes --exec_prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --bindir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin --libdir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib --with-mmdb=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --with-ssm=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 > checking for a BSD-compatible install... /usr/bin/install -c > checking whether build environment is sane... yes > checking for gawk... gawk > checking whether make sets $(MAKE)... yes > checking whether to enable maintainer-specific portions of Makefiles... no > checking for C++ compiler default output file name... a.out > checking whether the C++ compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... o > checking whether we are using the GNU C++ compiler... yes > checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes > checking for style of include used by make... GNU > checking dependency style of x86_64-pc-linux-gnu-g++... gcc3 > checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E > checking for egrep... grep -E > checking for ANSI C header files... yes > checking for a BSD-compatible install... /usr/bin/install -c > checking for floor... yes > checking for pow... yes > checking for rint... yes > checking for sqrt... yes > checking for sqrt in -lm... yes > checking for CMMDBManager in MMDB... no > configure: WARNING: assuming library -L/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -lmmdb headers -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb > checking for CSSMAlign in SSM... no > configure: WARNING: assuming library -L/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -lssm headers -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm > configure: creating ./config.status > config.status: creating Makefile > config.status: creating pisastore/Makefile > config.status: creating molref/Makefile > config.status: creating sbase/Makefile > config.status: creating doc/Makefile > config.status: creating pisa.cfg > config.status: executing depfiles commands > > ***** PISA CONFIGURATION FINISHED ******* > > > Building of the RCSB PDB_EXTRACT suite has been suppressed. > As a result you will not be able to use the PDB_EXTRACT programs. > > The configuration can be re-built by executing config.status : > > #!/bin/sh > # (Generated automatically by configure) > # CCP4 was configured as follows: > libdir="/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib" RANLIB="ranlib" \ > FC="gfortran" FOPTIM="-O2 -march=core2 -pipe -fomit-frame-pointer" \ > COPTIM="-O2 -march=core2 -pipe -fomit-frame-pointer" XFFLAGS="-fno-second-underscore -fno-stack-protector -fPIC" \ > XCFLAGS="-DGFORTRAN -DPROTOTYPE -fPIC" CC="x86_64-pc-linux-gnu-gcc" \ > LNS="ln -s" M4="m4 -D_gfort=1" \ > XCXXFLAGS=" -fPIC" CXX="x86_64-pc-linux-gnu-g++" \ > CXXOPTIM="-O2 -march=core2 -pipe -fomit-frame-pointer" \ > M4FLAGS="" SETFLAGS="refmac5_FLAGS='-fno-second-underscore -fno-stack-protector -fPIC -O0' lgglib_FLAGS='-fno-second-underscore -fno-stack-protector -fPIC -O0' arp_waters_FLAGS='-fno-second-underscore -fno-stack-protector -fPIC -O2 -march=core2 -pipe -fomit-frame-pointer' " \ > MAKE="make" F="f" \ > INSTALL_PROGRAM="cp -p" INSTALL_DATA="cp -p" \ > XLDFLAGS="-Wl,-rpath,/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -lm" \ > SHARE_LIB="ld -shared -soname libmmdb.so --whole-archive -o libmmdb.so libmmdb.a; ld -shared -soname libccp4c.so --whole-archive -o libccp4c.so libccp4c.a; ld -shared -soname libccp4f.so --whole-archive -o libccp4f.so libccp4f.a" \ > SHARED_LIB_CFLAGS="" \ > SHARED_LIB_FFLAGS="" \ > SHARE_INST="$(INSTALL_DATA) `pwd`/libmmdb.so $(libdir)/libmmdb.so; $(INSTALL_DATA) `pwd`/libccp4c.so $(libdir)/libccp4c.so; $(INSTALL_DATA) `pwd`/libccp4f.so $(libdir)/libccp4f.so; " \ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/configure --prefix=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --srcdir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1 --bindir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin --libdir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib --onlylibs --with-shared-libs --tmpdir=/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/temp --disable-x --disable-cctbx --disable-phaser --disable-mapslicer --enable-clipper --enable-ssm --disable-fftw --with-fftw=/usr --with-warnings --disable-pdb_extract linux64 -hush > > make -j12 -l8 -j1 onlylib > if test -n ""; then cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lapack; \ > make -l 8 ; else true; fi > if test -n "lib/ccif"; then cd lib/ccif; \ > make -l 8 ; else true; fi; \ > make install > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif' > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o condition.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/condition.c && \ > ar r libccif.a condition.o && true > ar: creating libccif.a > ranlib libccif.a > rm -f condition.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o star_map.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/star_map.c &&\ > ar r libccif.a star_map.o && true > ranlib libccif.a > rm -f star_map.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o ccif_unix.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/ccif_unix.c && \ > ar r libccif.a ccif_unix.o && true > ranlib libccif.a > rm -f ccif_unix.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o sym.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c && \ > ar r libccif.a sym.o && true > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c: In function ‘zzs_stat’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:488: warning: format ‘%d’ expects type ‘int’, but argument 3 has type ‘long int’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:510: warning: format ‘%d’ expects type ‘int’, but argument 4 has type ‘size_t’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:510: warning: format ‘%d’ expects type ‘int’, but argument 5 has type ‘size_t’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c: In function ‘zzs_dump’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:722: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:722: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:723: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:723: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:730: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:731: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:732: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:733: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:734: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:735: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:762: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c: In function ‘zzs_undump’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:852: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:852: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:853: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:853: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:860: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:861: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:862: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:863: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:864: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:894: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sym.c:901: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result > ranlib libccif.a > rm -f sym.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o sorlist.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sorlist.c && \ > ar r libccif.a sorlist.o && true > ranlib libccif.a > rm -f sorlist.o > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/scanf_ansi.c -o scanf_ansi > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o star_scan.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/star_scan.c -DPTR_FROM_TEXT=`/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/scanf_test` && \ > ar r libccif.a star_scan.o && true > ranlib libccif.a > rm -f star_scan.o scanf_ansi > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o star_err.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/star_err.c && \ > ar r libccif.a star_err.o && true > ranlib libccif.a > rm -f star_err.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o value_manip.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/value_manip.c && \ > ar r libccif.a value_manip.o && true > ranlib libccif.a > rm -f value_manip.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o context.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/context.c && \ > ar r libccif.a context.o && true > ranlib libccif.a > rm -f context.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o struct_manip.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/struct_manip.c && \ > ar r libccif.a struct_manip.o && true > ranlib libccif.a > rm -f struct_manip.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o f_interface.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/f_interface.c && \ > ar r libccif.a f_interface.o && true > ranlib libccif.a > rm -f f_interface.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o star_walk.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/star_walk.c && \ > ar r libccif.a star_walk.o && true > ranlib libccif.a > rm -f star_walk.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o star_print.o -D_refvar_inits=star_print_refvar_inits /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/star_print.c && \ > ar r libccif.a star_print.o && true > ranlib libccif.a > rm -f star_print.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o star_graph.o -D_refvar_inits=star_dot_refvar_inits /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/star_graph.c && \ > ar r libccif.a star_graph.o && true > ranlib libccif.a > rm -f star_graph.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o lib_dict2tab.o -D_refvar_inits=_dict_refvar_inits \ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/lib_dict2tab.c && \ > ar r libccif.a lib_dict2tab.o && true > ranlib libccif.a > rm -f lib_dict2tab.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o sort.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/sort.c && \ > ar r libccif.a sort.o && true > ranlib libccif.a > rm -f sort.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o list.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/list.c && \ > ar r libccif.a list.o && true > ranlib libccif.a > rm -f list.o > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -fPIC -o rb.o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c && \ > ar r libccif.a rb.o && true > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c: In function ‘rb_print_tree’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:446: warning: format ‘%x’ expects type ‘unsigned int’, but argument 2 has type ‘Rb_node’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:448: warning: format ‘%x’ expects type ‘unsigned int’, but argument 2 has type ‘Rb_node’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:448: warning: format ‘%x’ expects type ‘unsigned int’, but argument 3 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:454: warning: format ‘%x’ expects type ‘unsigned int’, but argument 2 has type ‘Rb_node’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:454: warning: format ‘%x’ expects type ‘unsigned int’, but argument 5 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:462: warning: format ‘%x’ expects type ‘unsigned int’, but argument 2 has type ‘Rb_node’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:462: warning: format ‘%x’ expects type ‘unsigned int’, but argument 5 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:462: warning: format ‘%x’ expects type ‘unsigned int’, but argument 6 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:462: warning: format ‘%x’ expects type ‘unsigned int’, but argument 7 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c: In function ‘rb_iprint_tree’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:471: warning: format ‘%x’ expects type ‘unsigned int’, but argument 2 has type ‘Rb_node’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:474: warning: format ‘%x’ expects type ‘unsigned int’, but argument 2 has type ‘Rb_node’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:474: warning: format ‘%x’ expects type ‘unsigned int’, but argument 3 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:474: warning: format ‘%x’ expects type ‘unsigned int’, but argument 4 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:474: warning: format ‘%x’ expects type ‘unsigned int’, but argument 5 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:481: warning: format ‘%x’ expects type ‘unsigned int’, but argument 2 has type ‘Rb_node’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:481: warning: format ‘%x’ expects type ‘unsigned int’, but argument 5 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:481: warning: format ‘%x’ expects type ‘unsigned int’, but argument 6 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:481: warning: format ‘%x’ expects type ‘unsigned int’, but argument 7 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:489: warning: format ‘%x’ expects type ‘unsigned int’, but argument 2 has type ‘Rb_node’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:489: warning: format ‘%x’ expects type ‘unsigned int’, but argument 5 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:489: warning: format ‘%x’ expects type ‘unsigned int’, but argument 6 has type ‘struct rb_node *’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/rb.c:489: warning: format ‘%x’ expects type ‘unsigned int’, but argument 7 has type ‘struct rb_node *’ > ranlib libccif.a > rm -f rb.o > if ( test ! -f /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/strtod.c ); then touch /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/strtod.c; fi > if (test -s /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/strtod.c -a -r /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/strtod.c) ; \ > then \ > x86_64-pc-linux-gnu-gcc -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/strtod.c && ar r libccif.a strtod.o; \ > ranlib libccif.a ; rm -f strtod.o; \ > else \ > touch libccif.a ; \ > fi > if test -f /librx.a; then \ > rm -rf rx.dir; mkdir rx.dir; \ > echo 'rxdispencer routines being added to library'; \ > cp /librx.a rx.dir; cd rx.dir; \ > ar -x librx.a; cd ..; \ > ar r libccif.a rx.dir/*.o; \ > ranlib libccif.a; rm -rf rx.dir; \ > fi > ld -fPIC -shared -soname libccif.so --whole-archive libccif.a -o libccif.so > x86_64-pc-linux-gnu-gcc -c -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif/cifdic_to_symtab.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -DHAVE_SIGNAL_H=1 -DHAVE_TIME_H=1 -DHAVE_ASSERT_H=1 -DUPDATE_WARN=1 -DUSER_ZZMODE_STACK=1 -D_XOPEN_SOURCE=500 -D_XOPEN_SOURCE_EXTENDED=1 -DHAVE_MMAP=1 -DHAVE_REGEX_H=1 -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -o cifdic_to_symtab cifdic_to_symtab.o -Wl,-rpath,/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -lm -L`pwd` -lccif -lm > > Building symbol table: > LD_LIBRARY_PATH=`pwd`:/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib ./cifdic_to_symtab /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/data/cif_mm.dic cif_mmdic.lib 199 > cif_mmdic.out > Loading dictionary....dictionary loaded. > Starting first tree walk....tree walk completed. > Starting second tree walk....tree walk completed. > Grouping items in their categories....done > Dumping symbol table....symbol table dumped. > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif' > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif' > if test -f /librx.a; then \ > rm -rf rx.dir; mkdir rx.dir; \ > echo 'rxdispencer routines being added to library'; \ > cp /librx.a rx.dir; cd rx.dir; \ > ar -x librx.a; cd ..; \ > ar r libccif.a rx.dir/*.o; \ > ranlib libccif.a; rm -rf rx.dir; \ > fi > ld -fPIC -shared -soname libccif.so --whole-archive libccif.a -o libccif.so > cp -p `pwd`/libccif.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libccif.a > cp -p `pwd`/cif_mmdic.lib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/cif_mmdic.lib > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libccif.a > if (test -f libccif.so); then \ > cp -p `pwd`/libccif.so /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libccif.so; \ > fi > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif' > cd lib/src; make -l 8 ; \ > make install > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src' > test ! -x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit && x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -o /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit fsplit.c || true > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename bfgs_min.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_chain.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_manager.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_symop.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename file_.o .o`.cpp > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/file_.cpp: In member function ‘word CFile::ReadLine(char*, word)’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/file_.cpp:681: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_cifdefs.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_mask.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_title.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename linalg_.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_coormngr.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_mmcif.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_utils.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename machine_.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_cryst.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_model.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename stream_.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mattype_.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_file.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_rwbrook.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_atom.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_graph.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_selmngr.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_align.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename hybrid_36.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_tables.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename math_.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_sbase.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_sbase0.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_uddata.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_xml.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_bondmngr.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename mmdb_ficif.o .o`.cpp > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/`basename random_n.o .o`.cpp > ar r ./libmmdb.a bfgs_min.o mmdb_chain.o mmdb_manager.o mmdb_symop.o file_.o mmdb_cifdefs.o mmdb_mask.o mmdb_title.o linalg_.o mmdb_coormngr.o mmdb_mmcif.o mmdb_utils.o machine_.o mmdb_cryst.o mmdb_model.o stream_.o mattype_.o mmdb_file.o mmdb_rwbrook.o mmdb_atom.o mmdb_graph.o mmdb_selmngr.o mmdb_align.o hybrid_36.o mmdb_tables.o math_.o mmdb_sbase.o mmdb_sbase0.o mmdb_uddata.o mmdb_xml.o mmdb_bondmngr.o mmdb_ficif.o random_n.o > ar: creating ./libmmdb.a > ranlib libmmdb.a > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename library_err.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename library_file.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename library_utils.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename ccp4_array.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename ccp4_parser.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cvecmat.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename ccp4_program.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename ccp4_general.o .o`.c > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/ccp4_general.c: In function ‘ccperror’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/ccp4_general.c:98: warning: passing argument 2 of ‘ccp4InvokeCallback’ discards qualifiers from pointer target type > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename ccp4_unitcell.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmtzlib.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmap_accessor.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmap_close.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmap_data.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmap_header.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmap_labels.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmap_open.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmap_skew.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmap_stats.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmap_symop.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename csymlib.o .o`.c > ar r ./libccp4c.a library_err.o library_file.o library_utils.o ccp4_array.o ccp4_parser.o cvecmat.o ccp4_program.o ccp4_general.o ccp4_unitcell.o cmtzlib.o cmap_accessor.o cmap_close.o cmap_data.o cmap_header.o cmap_labels.o cmap_open.o cmap_skew.o cmap_stats.o cmap_symop.o csymlib.o > ar: creating ./libccp4c.a > ranlib libccp4c.a > rm -rf parser.dir; mkdir parser.dir > cd parser.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/parser.f && rm -f ZZZ*.f zzz*.f; > keynum.f > keyerr.f > gtnrea.f > gtnint.f > gtprea.f > gtpint.f > sblank.f > cmatch.f > chkkey.f > putlin.f > blank.f > lerror.f > rdsymm.f > rdhead.f > rdcell.f > rdreso.f > rdscal.f > rdresl.f > gttrea.f > gttint.f > rdatomselect.f > if test ! -f parser.dir/parser.f; then \ > echo ' SUBROUTINE PRSER' > parser.dir/parser.f; \ > echo ' END' >> parser.dir/parser.f; \ > fi > cd parser.dir && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done\ > && ar r .././libccp4f.a *.o > ar: creating .././libccp4f.a > rm -f parser.dir/*.o > rm -rf fftlib.dir; mkdir fftlib.dir > echo ' SUBROUTINE FFTLIB' > fftlib.dir/fftlib.f > echo ' END' >> fftlib.dir/fftlib.f > cd fftlib.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fftlib.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done \ > && ar r .././libccp4f.a *.o > rm -f fftlib.dir/*.o > rm -rf lgglib.dir; mkdir lgglib.dir > echo ' SUBROUTINE LGGLIB' > lgglib.dir/lgglib.f > echo ' END' >> lgglib.dir/lgglib.f > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/lgglib.dir/getpdb1.f:29.72: > > 1 , (X(I,NATM),I=1,3),occ(natm),bfac(natm) > 1 > Warning: Branch at (1) causes an infinite loop > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/lgglib.dir/getpdb2.f:31.72: > > 1 , (X(I,NATM),I=1,3),occ(natm),bfac(natm) > 1 > Warning: Branch at (1) causes an infinite loop > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/lgglib.dir/getpdb3.f:31.72: > > 1 res(natm), (X(I,NATM),I=1,3),occ(natm),bfac(natm) > 1 > Warning: Branch at (1) causes an infinite loop > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/lgglib.dir/getpdbca.f:24.72: > > 1 , (X(I,NATM),I=1,3) > 1 > Warning: Branch at (1) causes an infinite loop > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/lgglib.dir/getpdb.f:23.72: > > 1 , (X(I,NATM),I=1,3) > 1 > Warning: Branch at (1) causes an infinite loop > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/lgglib.dir/getrdi.f:25.72: > > 1 SEQ(NATM), RES(NATM), ATOM(NATM) > 1 > Warning: Branch at (1) causes an infinite loop > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/lgglib.dir/packexpnd.f:48.72: > > if (jmove.eq.14) goto 40 > 1 > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/lgglib.dir/packexpnd.f:69.72: > > 40 end do > 2 > Warning: Deleted feature: GOTO at (1) jumps to END of construct at (2) > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/lgglib.dir/packexpnd.f:66.72: > > goto 40 > 1 > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/lgglib.dir/packexpnd.f:69.72: > > 40 end do > 2 > Warning: Deleted feature: GOTO at (1) jumps to END of construct at (2) > rm -f lgglib.dir/*.o > rm -rf libhtml.dir; mkdir libhtml.dir > echo ' SUBROUTINE LIBHTML' > libhtml.dir/libhtml.f > echo ' END' >> libhtml.dir/libhtml.f > cd libhtml.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/libhtml.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done\ > && ar r .././libccp4f.a *.o > rm -f libhtml.dir/*.o > rm -rf modlib.dir; mkdir modlib.dir > echo ' SUBROUTINE MODLIB' > modlib.dir/modlib.f > echo ' END' >> modlib.dir/modlib.f > cd modlib.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/modlib.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done\ > && ar r .././libccp4f.a *.o > rm -f modlib.dir/*.o > rm -rf plotsubs.dir; mkdir plotsubs.dir > echo ' SUBROUTINE PLOTSUBS' > plotsubs.dir/plotsubs.f > echo ' END' >> plotsubs.dir/plotsubs.f > cd plotsubs.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/plotsubs.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done\ > && ar r .././libccp4f.a *.o > rm -f plotsubs.dir/*.o > rm -rf plot84lib.dir; mkdir plot84lib.dir > echo ' SUBROUTINE PLOT84LIB' > plot84lib.dir/plot84lib.f > echo ' END' >> plot84lib.dir/plot84lib.f > cd plot84lib.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/plot84lib.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done\ > && ar r .././libccp4f.a *.o > rm -f plot84lib.dir/*.o > rm -rf pxxml.dir; mkdir pxxml.dir > echo ' SUBROUTINE PXXML' > pxxml.dir/pxxml.f > echo ' END' >> pxxml.dir/pxxml.f > cd pxxml.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/pxxml.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done\ > && ar r .././libccp4f.a *.o > rm -f pxxml.dir/*.o > rm -rf ccplib.dir; mkdir ccplib.dir > echo ' SUBROUTINE CCPLIB' > ccplib.dir/ccplib.f > echo ' END' >> ccplib.dir/ccplib.f > cd ccplib.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/ccplib.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done\ > && ar r .././libccp4f.a *.o > rm -f ccplib.dir/*.o > m4 -D_gfort=1 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/unix.m4 >unix.f > rm -rf unix.dir; mkdir unix.dir > echo ' SUBROUTINE UNIX' > unix.dir/unix.f > echo ' END' >> unix.dir/unix.f > cd unix.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit ../unix.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done\ > && ar r .././libccp4f.a *.o > rm -f unix.dir/*.o > rm -rf rwbrook.dir; mkdir rwbrook.dir > echo ' SUBROUTINE RWBROOK' > rwbrook.dir/rwbrook.f > echo ' END' >> rwbrook.dir/rwbrook.f > cd rwbrook.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/rwbrook.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done\ > && ar r .././libccp4f.a *.o > rm -f rwbrook.dir/*.o > rm -rf cciflib.dir; mkdir cciflib.dir > echo ' SUBROUTINE CCIFLIB' > cciflib.dir/cciflib.f > echo ' END' >> cciflib.dir/cciflib.f > cd cciflib.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cciflib.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src $i; done\ > && ar r .././libccp4f.a *.o > rm -f cciflib.dir/*.o > rm -rf harvlib.dir; mkdir harvlib.dir > echo ' SUBROUTINE HARVLIB' > harvlib.dir/harvlib.f > echo ' END' >> harvlib.dir/harvlib.f > if test -n "lib/ccif" ; then cd harvlib.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/harvlib.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src $i; done\ > && ar r .././libccp4f.a *.o ; else \ > cd harvlib.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/harv_dummy.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src $i; done\ > && ar r .././libccp4f.a *.o ; fi > rm -f harvlib.dir/*.o > rm -rf keyparse.dir; mkdir keyparse.dir > echo ' SUBROUTINE KEYPARSE' > keyparse.dir/keyparse.f > echo ' END' >> keyparse.dir/keyparse.f > cd keyparse.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/keyparse.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done\ > && ar r .././libccp4f.a *.o > rm -f keyparse.dir/*.o > gfortran -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/pack_f.f && ar r ./libccp4f.a pack_f.o \ > && rm pack_f.o > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/pack_c.c > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/pack_c.c: In function ‘pack_chunk’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/pack_c.c:852: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/pack_c.c:860: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/pack_c.c: In function ‘v2pack_chunk’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/pack_c.c:901: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/pack_c.c:910: warning: ignoring return value of ‘fwrite’, declared with attribute warn_unused_result > ar r ./libccp4f.a pack_c.o && rm pack_c.o > rm -rf dna_output.dir; mkdir dna_output.dir > echo ' SUBROUTINE DNA_OUTPUT' > dna_output.dir/dna_output.f > echo ' END' >> dna_output.dir/dna_output.f > cd dna_output.dir && /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/fsplit /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/dna_output.f >/dev/null && rm -f ZZZ*.f zzz*.f && \ > for i in `pwd`/*.f; do \ > gfortran -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC $i; done\ > && ar r .././libccp4f.a *.o > rm -f dna_output.dir/*.o > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmtzlib_f.o .o`.c > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c: In function ‘lrhist_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:275: warning: passing argument 2 of ‘ccp4_lrhist’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c: In function ‘lkyin_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:602: warning: passing argument 2 of ‘MtzParseLabin’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c: In function ‘lkyout_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:656: warning: passing argument 2 of ‘MtzParseLabin’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c: In function ‘lkyset_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:701: warning: passing argument 2 of ‘MtzParseLabin’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:701: warning: passing argument 4 of ‘MtzParseLabin’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c: In function ‘lrassn_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:800: warning: passing argument 2 of ‘ccp4_lrassn’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:800: warning: passing argument 4 of ‘ccp4_lrassn’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c: In function ‘lrreff_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:1180: warning: passing argument 5 of ‘ccp4_lrreff’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c: In function ‘lwhist_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:1777: warning: passing argument 2 of ‘MtzAddHistory’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c: In function ‘lwhstl_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:1829: warning: passing argument 2 of ‘MtzAddHistory’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c: In function ‘lwassn_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:2381: warning: passing argument 2 of ‘ccp4_lwassn’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:2381: warning: passing argument 4 of ‘ccp4_lwassn’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c: In function ‘lwclab_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:2459: warning: passing argument 2 of ‘ccp4_lwassn’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmtzlib_f.c:2459: warning: passing argument 4 of ‘ccp4_lwassn’ from incompatible pointer type > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename csymlib_f.o .o`.c > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/csymlib_f.c: In function ‘symtr3_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/csymlib_f.c:341: warning: passing argument 3 of ‘mat4_to_symop’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/csymlib_f.c: In function ‘symtr4_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/csymlib_f.c:377: warning: passing argument 3 of ‘mat4_to_symop’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/csymlib_f.c: In function ‘calc_orig_ps_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/csymlib_f.c:1684: warning: passing argument 3 of ‘ccp4spg_generate_origins’ from incompatible pointer type > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename ccp4_parser_f.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename library_f.o .o`.c > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/library_f.c: In function ‘ltime_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/library_f.c:799: warning: passing argument 1 of ‘localtime_r’ makes pointer from integer without a cast > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/library_f.c: In function ‘gmtime_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/library_f.c:832: warning: passing argument 1 of ‘gmtime_r’ makes pointer from integer without a cast > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename ccp4_diskio_f.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename ccp4_general_f.o .o`.c > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename ccp4_unitcell_f.o .o`.c > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/ccp4_unitcell_f.c: In function ‘ccp4uc_f_orth_to_frac_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/ccp4_unitcell_f.c:86: warning: passing argument 1 of ‘ccp4uc_orth_to_frac’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/ccp4_unitcell_f.c: In function ‘ccp4uc_f_frac_to_orth_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/ccp4_unitcell_f.c:105: warning: passing argument 1 of ‘ccp4uc_orth_to_frac’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/ccp4_unitcell_f.c: In function ‘ccp4uc_f_orthu_to_fracu_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/ccp4_unitcell_f.c:124: warning: passing argument 1 of ‘ccp4uc_orthu_to_fracu’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/ccp4_unitcell_f.c: In function ‘ccp4uc_f_fracu_to_orthu_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/ccp4_unitcell_f.c:143: warning: passing argument 1 of ‘ccp4uc_orthu_to_fracu’ from incompatible pointer type > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename cmaplib_f.o .o`.c > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmaplib_f.c: In function ‘ioArrayPrint’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmaplib_f.c:91: warning: format ‘%d’ expects type ‘int’, but argument 3 has type ‘long int’ > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmaplib_f.c:97: warning: passing argument 1 of ‘free’ discards qualifiers from pointer target type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmaplib_f.c: In function ‘msywrt_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmaplib_f.c:1154: warning: passing argument 3 of ‘mat4_to_symop’ from incompatible pointer type > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmaplib_f.c: In function ‘ccp4_map_write_symm_matrix_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/cmaplib_f.c:1181: warning: passing argument 3 of ‘mat4_to_symop’ from incompatible pointer type > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename binsortint.o .o`.c > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/binsortint.c: In function ‘srtbeg_’: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/binsortint.c:160: warning: ignoring return value of ‘pipe’, declared with attribute warn_unused_result > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/binsortint.c:161: warning: ignoring return value of ‘pipe’, declared with attribute warn_unused_result > x86_64-pc-linux-gnu-gcc -O2 -march=core2 -pipe -fomit-frame-pointer -DGFORTRAN -DPROTOTYPE -fPIC -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -c /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/`basename hybrid_36_f.o .o`.c > ar r ./libccp4f.a cmtzlib_f.o csymlib_f.o ccp4_parser_f.o library_f.o ccp4_diskio_f.o ccp4_general_f.o ccp4_unitcell_f.o cmaplib_f.o binsortint.o hybrid_36_f.o > ranlib libccp4f.a > ld -shared -soname libmmdb.so --whole-archive -o libmmdb.so libmmdb.a; ld -shared -soname libccp4c.so --whole-archive -o libccp4c.so libccp4c.a; ld -shared -soname libccp4f.so --whole-archive -o libccp4f.so libccp4f.a > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src' > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src' > ld -shared -soname libmmdb.so --whole-archive -o libmmdb.so libmmdb.a; ld -shared -soname libccp4c.so --whole-archive -o libccp4c.so libccp4c.a; ld -shared -soname libccp4f.so --whole-archive -o libccp4f.so libccp4f.a > if test ! -d /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4; then mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4; fi > cp -p ccp4_file_err.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_file_err.h > cp -p ccp4_program.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_program.h > cp -p ccp4_unitcell.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_unitcell.h > cp -p cmap_errno.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_errno.h > cp -p cmap_stats.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_stats.h > cp -p csymlib.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/csymlib.h > cp -p library_file.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/library_file.h > cp -p w32mvs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/w32mvs.h > cp -p ccp4_fortran.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_fortran.h > cp -p ccp4_spg.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_spg.h > cp -p ccp4_utils.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_utils.h > cp -p cmap_header.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_header.h > cp -p cmaplib.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmaplib.h > cp -p cvecmat.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cvecmat.h > cp -p mtzdata.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/mtzdata.h > cp -p ccp4_array.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_array.h > cp -p ccp4_general.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_general.h > cp -p ccp4_sysdep.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_sysdep.h > cp -p ccp4_vars.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_vars.h > cp -p cmap_labels.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_labels.h > cp -p cmaplib_f.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmaplib_f.h > cp -p overview.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/overview.h > cp -p ccp4_errno.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_errno.h > cp -p ccp4_parser.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_parser.h > cp -p ccp4_types.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_types.h > cp -p cmap_data.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_data.h > cp -p cmap_skew.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_skew.h > cp -p cmtzlib.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmtzlib.h > cp -p library_f.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/library_f.h > if test ! -d /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb; then mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb; fi > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/bfgs_min.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/bfgs_min.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/math_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/math_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_bondmngr.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_bondmngr.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_cryst.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_cryst.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_graph.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_graph.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_model.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_model.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_symop.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_symop.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_utils.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_utils.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/file_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/file_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mattype_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mattype_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_chain.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_chain.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_defs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_defs.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_manager.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_manager.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_rwbrook.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_rwbrook.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_tables.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_tables.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_xml.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_xml.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/linalg_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/linalg_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_align.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_align.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_cifdefs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_cifdefs.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_ficif.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_ficif.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_mask.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_mask.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_sbase.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_sbase.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_title.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_title.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/random_n.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/random_n.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/machine_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/machine_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_atom.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_atom.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_coormngr.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_coormngr.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_file.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_file.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_mmcif.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_mmcif.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_selmngr.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_selmngr.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_uddata.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_uddata.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/stream_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/stream_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_sbase0.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_sbase0.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/hybrid_36.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/hybrid_36.h > cp -p `pwd`/./libmmdb.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libmmdb.a > cp -p `pwd`/./libccp4c.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libccp4c.a > cp -p `pwd`/./libccp4f.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libccp4f.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libmmdb.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libccp4c.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libccp4f.a > cp -p `pwd`/libmmdb.so /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libmmdb.so; cp -p `pwd`/libccp4c.so /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libccp4c.so; cp -p `pwd`/libccp4f.so /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libccp4f.so; > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src' > if test -n ""; then cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/fftw; \ > make -i -l 8 install; else true; fi ; \ > make install > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1' > for i in lib/clipper lib/DiffractionImage lib/ccif lib/src lib/ssm src lib/data unsupported/src x-windows share ; do (if test -f $i/Makefile; then \ > if test $i = x-windows; then \ > cd $i; make -i -wl 8 install; \ > else cd $i; make -wl 8 install; fi; \ > else true; fi) ; done > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper' > Making install in macros > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/macros' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/macros' > make[4]: Nothing to be done for `install-exec-am'. > make[4]: Nothing to be done for `install-data-am'. > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/macros' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/macros' > Making install in clipper > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > Making install in phs > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/phs' > source='phs_io.cpp' object='phs_io.lo' libtool=yes \ > depfile='.deps/phs_io.Plo' tmpdepfile='.deps/phs_io.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o phs_io.lo `test -f 'phs_io.cpp' || echo './'`phs_io.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c phs_io.cpp -MT phs_io.lo -MD -MP -MF .deps/phs_io.TPlo -fPIC -DPIC -o .libs/phs_io.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c phs_io.cpp -MT phs_io.lo -MD -MP -MF .deps/phs_io.TPlo -o phs_io.o >/dev/null 2>&1 > /bin/sh ../../libtool --mode=link x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -o libclipper-phs.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -version-info 2:0 phs_io.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/phs_io.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -march=core2 -Wl,-soname -Wl,libclipper-phs.so.2 -o .libs/libclipper-phs.so.2.0.0 > (cd .libs && rm -f libclipper-phs.so.2 && ln -s libclipper-phs.so.2.0.0 libclipper-phs.so.2) > (cd .libs && rm -f libclipper-phs.so && ln -s libclipper-phs.so.2.0.0 libclipper-phs.so) > ar cru .libs/libclipper-phs.a phs_io.o > ranlib .libs/libclipper-phs.a > creating libclipper-phs.la > (cd .libs && rm -f libclipper-phs.la && ln -s ../libclipper-phs.la libclipper-phs.la) > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/phs' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-phs.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.la > /usr/bin/install -c .libs/libclipper-phs.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-phs.so.2.0.0 libclipper-phs.so.2 || { rm -f libclipper-phs.so.2 && ln -s libclipper-phs.so.2.0.0 libclipper-phs.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-phs.so.2.0.0 libclipper-phs.so || { rm -f libclipper-phs.so && ln -s libclipper-phs.so.2.0.0 libclipper-phs.so; }; }) > /usr/bin/install -c .libs/libclipper-phs.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.la > /usr/bin/install -c .libs/libclipper-phs.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/phs > mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper > mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/phs > cp -p phs_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/phs/phs_io.h > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/phs' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/phs' > Making install in contrib > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/contrib' > source='convolution_search.cpp' object='convolution_search.lo' libtool=yes \ > depfile='.deps/convolution_search.Plo' tmpdepfile='.deps/convolution_search.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o convolution_search.lo `test -f 'convolution_search.cpp' || echo './'`convolution_search.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c convolution_search.cpp -MT convolution_search.lo -MD -MP -MF .deps/convolution_search.TPlo -fPIC -DPIC -o .libs/convolution_search.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c convolution_search.cpp -MT convolution_search.lo -MD -MP -MF .deps/convolution_search.TPlo -o convolution_search.o >/dev/null 2>&1 > source='sfcalc.cpp' object='sfcalc.lo' libtool=yes \ > depfile='.deps/sfcalc.Plo' tmpdepfile='.deps/sfcalc.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o sfcalc.lo `test -f 'sfcalc.cpp' || echo './'`sfcalc.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c sfcalc.cpp -MT sfcalc.lo -MD -MP -MF .deps/sfcalc.TPlo -fPIC -DPIC -o .libs/sfcalc.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c sfcalc.cpp -MT sfcalc.lo -MD -MP -MF .deps/sfcalc.TPlo -o sfcalc.o >/dev/null 2>&1 > source='edcalc.cpp' object='edcalc.lo' libtool=yes \ > depfile='.deps/edcalc.Plo' tmpdepfile='.deps/edcalc.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o edcalc.lo `test -f 'edcalc.cpp' || echo './'`edcalc.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c edcalc.cpp -MT edcalc.lo -MD -MP -MF .deps/edcalc.TPlo -fPIC -DPIC -o .libs/edcalc.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c edcalc.cpp -MT edcalc.lo -MD -MP -MF .deps/edcalc.TPlo -o edcalc.o >/dev/null 2>&1 > source='sfcalc_obs.cpp' object='sfcalc_obs.lo' libtool=yes \ > depfile='.deps/sfcalc_obs.Plo' tmpdepfile='.deps/sfcalc_obs.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o sfcalc_obs.lo `test -f 'sfcalc_obs.cpp' || echo './'`sfcalc_obs.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c sfcalc_obs.cpp -MT sfcalc_obs.lo -MD -MP -MF .deps/sfcalc_obs.TPlo -fPIC -DPIC -o .libs/sfcalc_obs.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c sfcalc_obs.cpp -MT sfcalc_obs.lo -MD -MP -MF .deps/sfcalc_obs.TPlo -o sfcalc_obs.o >/dev/null 2>&1 > source='fffear.cpp' object='fffear.lo' libtool=yes \ > depfile='.deps/fffear.Plo' tmpdepfile='.deps/fffear.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o fffear.lo `test -f 'fffear.cpp' || echo './'`fffear.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c fffear.cpp -MT fffear.lo -MD -MP -MF .deps/fffear.TPlo -fPIC -DPIC -o .libs/fffear.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c fffear.cpp -MT fffear.lo -MD -MP -MF .deps/fffear.TPlo -o fffear.o >/dev/null 2>&1 > source='sfscale.cpp' object='sfscale.lo' libtool=yes \ > depfile='.deps/sfscale.Plo' tmpdepfile='.deps/sfscale.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o sfscale.lo `test -f 'sfscale.cpp' || echo './'`sfscale.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c sfscale.cpp -MT sfscale.lo -MD -MP -MF .deps/sfscale.TPlo -fPIC -DPIC -o .libs/sfscale.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c sfscale.cpp -MT sfscale.lo -MD -MP -MF .deps/sfscale.TPlo -o sfscale.o >/dev/null 2>&1 > source='function_object_bases.cpp' object='function_object_bases.lo' libtool=yes \ > depfile='.deps/function_object_bases.Plo' tmpdepfile='.deps/function_object_bases.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o function_object_bases.lo `test -f 'function_object_bases.cpp' || echo './'`function_object_bases.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c function_object_bases.cpp -MT function_object_bases.lo -MD -MP -MF .deps/function_object_bases.TPlo -fPIC -DPIC -o .libs/function_object_bases.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c function_object_bases.cpp -MT function_object_bases.lo -MD -MP -MF .deps/function_object_bases.TPlo -o function_object_bases.o >/dev/null 2>&1 > source='sfweight.cpp' object='sfweight.lo' libtool=yes \ > depfile='.deps/sfweight.Plo' tmpdepfile='.deps/sfweight.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o sfweight.lo `test -f 'sfweight.cpp' || echo './'`sfweight.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c sfweight.cpp -MT sfweight.lo -MD -MP -MF .deps/sfweight.TPlo -fPIC -DPIC -o .libs/sfweight.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c sfweight.cpp -MT sfweight.lo -MD -MP -MF .deps/sfweight.TPlo -o sfweight.o >/dev/null 2>&1 > source='mapfilter.cpp' object='mapfilter.lo' libtool=yes \ > depfile='.deps/mapfilter.Plo' tmpdepfile='.deps/mapfilter.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o mapfilter.lo `test -f 'mapfilter.cpp' || echo './'`mapfilter.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c mapfilter.cpp -MT mapfilter.lo -MD -MP -MF .deps/mapfilter.TPlo -fPIC -DPIC -o .libs/mapfilter.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c mapfilter.cpp -MT mapfilter.lo -MD -MP -MF .deps/mapfilter.TPlo -o mapfilter.o >/dev/null 2>&1 > source='skeleton.cpp' object='skeleton.lo' libtool=yes \ > depfile='.deps/skeleton.Plo' tmpdepfile='.deps/skeleton.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o skeleton.lo `test -f 'skeleton.cpp' || echo './'`skeleton.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c skeleton.cpp -MT skeleton.lo -MD -MP -MF .deps/skeleton.TPlo -fPIC -DPIC -o .libs/skeleton.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c skeleton.cpp -MT skeleton.lo -MD -MP -MF .deps/skeleton.TPlo -o skeleton.o >/dev/null 2>&1 > source='originmatch.cpp' object='originmatch.lo' libtool=yes \ > depfile='.deps/originmatch.Plo' tmpdepfile='.deps/originmatch.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o originmatch.lo `test -f 'originmatch.cpp' || echo './'`originmatch.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c originmatch.cpp -MT originmatch.lo -MD -MP -MF .deps/originmatch.TPlo -fPIC -DPIC -o .libs/originmatch.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c originmatch.cpp -MT originmatch.lo -MD -MP -MF .deps/originmatch.TPlo -o originmatch.o >/dev/null 2>&1 > source='test_contrib.cpp' object='test_contrib.lo' libtool=yes \ > depfile='.deps/test_contrib.Plo' tmpdepfile='.deps/test_contrib.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o test_contrib.lo `test -f 'test_contrib.cpp' || echo './'`test_contrib.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c test_contrib.cpp -MT test_contrib.lo -MD -MP -MF .deps/test_contrib.TPlo -fPIC -DPIC -o .libs/test_contrib.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c test_contrib.cpp -MT test_contrib.lo -MD -MP -MF .deps/test_contrib.TPlo -o test_contrib.o >/dev/null 2>&1 > /bin/sh ../../libtool --mode=link x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -o libclipper-contrib.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -version-info 2:0 convolution_search.lo sfcalc.lo edcalc.lo sfcalc_obs.lo fffear.lo sfscale.lo function_object_bases.lo sfweight.lo mapfilter.lo skeleton.lo originmatch.lo test_contrib.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/convolution_search.o .libs/sfcalc.o .libs/edcalc.o .libs/sfcalc_obs.o .libs/fffear.o .libs/sfscale.o .libs/function_object_bases.o .libs/sfweight.o .libs/mapfilter.o .libs/skeleton.o .libs/originmatch.o .libs/test_contrib.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -march=core2 -Wl,-soname -Wl,libclipper-contrib.so.2 -o .libs/libclipper-contrib.so.2.0.0 > (cd .libs && rm -f libclipper-contrib.so.2 && ln -s libclipper-contrib.so.2.0.0 libclipper-contrib.so.2) > (cd .libs && rm -f libclipper-contrib.so && ln -s libclipper-contrib.so.2.0.0 libclipper-contrib.so) > ar cru .libs/libclipper-contrib.a convolution_search.o sfcalc.o edcalc.o sfcalc_obs.o fffear.o sfscale.o function_object_bases.o sfweight.o mapfilter.o skeleton.o originmatch.o test_contrib.o > ranlib .libs/libclipper-contrib.a > creating libclipper-contrib.la > (cd .libs && rm -f libclipper-contrib.la && ln -s ../libclipper-contrib.la libclipper-contrib.la) > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/contrib' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-contrib.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.la > /usr/bin/install -c .libs/libclipper-contrib.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-contrib.so.2.0.0 libclipper-contrib.so.2 || { rm -f libclipper-contrib.so.2 && ln -s libclipper-contrib.so.2.0.0 libclipper-contrib.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-contrib.so.2.0.0 libclipper-contrib.so || { rm -f libclipper-contrib.so && ln -s libclipper-contrib.so.2.0.0 libclipper-contrib.so; }; }) > /usr/bin/install -c .libs/libclipper-contrib.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.la > /usr/bin/install -c .libs/libclipper-contrib.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib > mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib > cp -p convolution_search.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/convolution_search.h > cp -p mapfilter.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/mapfilter.h > cp -p sfscale.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/sfscale.h > cp -p edcalc.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/edcalc.h > cp -p originmatch.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/originmatch.h > cp -p sfweight.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/sfweight.h > cp -p fffear.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/fffear.h > cp -p sfcalc.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/sfcalc.h > cp -p skeleton.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/skeleton.h > cp -p function_object_bases.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/function_object_bases.h > cp -p sfcalc_obs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/sfcalc_obs.h > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/contrib' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/contrib' > Making install in cif > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cif' > source='cif_data_io.cpp' object='cif_data_io.lo' libtool=yes \ > depfile='.deps/cif_data_io.Plo' tmpdepfile='.deps/cif_data_io.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o cif_data_io.lo `test -f 'cif_data_io.cpp' || echo './'`cif_data_io.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c cif_data_io.cpp -MT cif_data_io.lo -MD -MP -MF .deps/cif_data_io.TPlo -fPIC -DPIC -o .libs/cif_data_io.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c cif_data_io.cpp -MT cif_data_io.lo -MD -MP -MF .deps/cif_data_io.TPlo -o cif_data_io.o >/dev/null 2>&1 > /bin/sh ../../libtool --mode=link x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -o libclipper-cif.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -version-info 2:0 cif_data_io.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/cif_data_io.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -march=core2 -Wl,-soname -Wl,libclipper-cif.so.2 -o .libs/libclipper-cif.so.2.0.0 > (cd .libs && rm -f libclipper-cif.so.2 && ln -s libclipper-cif.so.2.0.0 libclipper-cif.so.2) > (cd .libs && rm -f libclipper-cif.so && ln -s libclipper-cif.so.2.0.0 libclipper-cif.so) > ar cru .libs/libclipper-cif.a cif_data_io.o > ranlib .libs/libclipper-cif.a > creating libclipper-cif.la > (cd .libs && rm -f libclipper-cif.la && ln -s ../libclipper-cif.la libclipper-cif.la) > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cif' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-cif.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.la > /usr/bin/install -c .libs/libclipper-cif.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-cif.so.2.0.0 libclipper-cif.so.2 || { rm -f libclipper-cif.so.2 && ln -s libclipper-cif.so.2.0.0 libclipper-cif.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-cif.so.2.0.0 libclipper-cif.so || { rm -f libclipper-cif.so && ln -s libclipper-cif.so.2.0.0 libclipper-cif.so; }; }) > /usr/bin/install -c .libs/libclipper-cif.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.la > /usr/bin/install -c .libs/libclipper-cif.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cif > mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cif > cp -p cif_data_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cif/cif_data_io.h > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cif' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cif' > Making install in mmdb > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdb' > source='clipper_mmdb.cpp' object='clipper_mmdb.lo' libtool=yes \ > depfile='.deps/clipper_mmdb.Plo' tmpdepfile='.deps/clipper_mmdb.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o clipper_mmdb.lo `test -f 'clipper_mmdb.cpp' || echo './'`clipper_mmdb.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_mmdb.cpp -MT clipper_mmdb.lo -MD -MP -MF .deps/clipper_mmdb.TPlo -fPIC -DPIC -o .libs/clipper_mmdb.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_mmdb.cpp -MT clipper_mmdb.lo -MD -MP -MF .deps/clipper_mmdb.TPlo -o clipper_mmdb.o >/dev/null 2>&1 > /bin/sh ../../libtool --mode=link x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -o libclipper-mmdb.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -version-info 2:0 clipper_mmdb.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/clipper_mmdb.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -march=core2 -Wl,-soname -Wl,libclipper-mmdb.so.2 -o .libs/libclipper-mmdb.so.2.0.0 > (cd .libs && rm -f libclipper-mmdb.so.2 && ln -s libclipper-mmdb.so.2.0.0 libclipper-mmdb.so.2) > (cd .libs && rm -f libclipper-mmdb.so && ln -s libclipper-mmdb.so.2.0.0 libclipper-mmdb.so) > ar cru .libs/libclipper-mmdb.a clipper_mmdb.o > ranlib .libs/libclipper-mmdb.a > creating libclipper-mmdb.la > (cd .libs && rm -f libclipper-mmdb.la && ln -s ../libclipper-mmdb.la libclipper-mmdb.la) > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdb' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-mmdb.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.la > /usr/bin/install -c .libs/libclipper-mmdb.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-mmdb.so.2.0.0 libclipper-mmdb.so.2 || { rm -f libclipper-mmdb.so.2 && ln -s libclipper-mmdb.so.2.0.0 libclipper-mmdb.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-mmdb.so.2.0.0 libclipper-mmdb.so || { rm -f libclipper-mmdb.so && ln -s libclipper-mmdb.so.2.0.0 libclipper-mmdb.so; }; }) > /usr/bin/install -c .libs/libclipper-mmdb.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.la > /usr/bin/install -c .libs/libclipper-mmdb.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdb > mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdb > cp -p clipper_mmdb.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdb/clipper_mmdb.h > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdb' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdb' > Making install in mmdbold > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdbold' > source='clipper_mmdb.cpp' object='clipper_mmdb.lo' libtool=yes \ > depfile='.deps/clipper_mmdb.Plo' tmpdepfile='.deps/clipper_mmdb.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o clipper_mmdb.lo `test -f 'clipper_mmdb.cpp' || echo './'`clipper_mmdb.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_mmdb.cpp -MT clipper_mmdb.lo -MD -MP -MF .deps/clipper_mmdb.TPlo -fPIC -DPIC -o .libs/clipper_mmdb.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_mmdb.cpp -MT clipper_mmdb.lo -MD -MP -MF .deps/clipper_mmdb.TPlo -o clipper_mmdb.o >/dev/null 2>&1 > source='clipper_mmdb_wrapper.cpp' object='clipper_mmdb_wrapper.lo' libtool=yes \ > depfile='.deps/clipper_mmdb_wrapper.Plo' tmpdepfile='.deps/clipper_mmdb_wrapper.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o clipper_mmdb_wrapper.lo `test -f 'clipper_mmdb_wrapper.cpp' || echo './'`clipper_mmdb_wrapper.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_mmdb_wrapper.cpp -MT clipper_mmdb_wrapper.lo -MD -MP -MF .deps/clipper_mmdb_wrapper.TPlo -fPIC -DPIC -o .libs/clipper_mmdb_wrapper.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_mmdb_wrapper.cpp -MT clipper_mmdb_wrapper.lo -MD -MP -MF .deps/clipper_mmdb_wrapper.TPlo -o clipper_mmdb_wrapper.o >/dev/null 2>&1 > source='clipper_mmdb_types.cpp' object='clipper_mmdb_types.lo' libtool=yes \ > depfile='.deps/clipper_mmdb_types.Plo' tmpdepfile='.deps/clipper_mmdb_types.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o clipper_mmdb_types.lo `test -f 'clipper_mmdb_types.cpp' || echo './'`clipper_mmdb_types.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_mmdb_types.cpp -MT clipper_mmdb_types.lo -MD -MP -MF .deps/clipper_mmdb_types.TPlo -fPIC -DPIC -o .libs/clipper_mmdb_types.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_mmdb_types.cpp -MT clipper_mmdb_types.lo -MD -MP -MF .deps/clipper_mmdb_types.TPlo -o clipper_mmdb_types.o >/dev/null 2>&1 > source='container_mmdb.cpp' object='container_mmdb.lo' libtool=yes \ > depfile='.deps/container_mmdb.Plo' tmpdepfile='.deps/container_mmdb.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o container_mmdb.lo `test -f 'container_mmdb.cpp' || echo './'`container_mmdb.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container_mmdb.cpp -MT container_mmdb.lo -MD -MP -MF .deps/container_mmdb.TPlo -fPIC -DPIC -o .libs/container_mmdb.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container_mmdb.cpp -MT container_mmdb.lo -MD -MP -MF .deps/container_mmdb.TPlo -o container_mmdb.o >/dev/null 2>&1 > /bin/sh ../../libtool --mode=link x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -o libclipper-mmdbold.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -version-info 2:0 clipper_mmdb.lo clipper_mmdb_wrapper.lo clipper_mmdb_types.lo container_mmdb.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/clipper_mmdb.o .libs/clipper_mmdb_wrapper.o .libs/clipper_mmdb_types.o .libs/container_mmdb.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -march=core2 -Wl,-soname -Wl,libclipper-mmdbold.so.2 -o .libs/libclipper-mmdbold.so.2.0.0 > (cd .libs && rm -f libclipper-mmdbold.so.2 && ln -s libclipper-mmdbold.so.2.0.0 libclipper-mmdbold.so.2) > (cd .libs && rm -f libclipper-mmdbold.so && ln -s libclipper-mmdbold.so.2.0.0 libclipper-mmdbold.so) > ar cru .libs/libclipper-mmdbold.a clipper_mmdb.o clipper_mmdb_wrapper.o clipper_mmdb_types.o container_mmdb.o > ranlib .libs/libclipper-mmdbold.a > creating libclipper-mmdbold.la > (cd .libs && rm -f libclipper-mmdbold.la && ln -s ../libclipper-mmdbold.la libclipper-mmdbold.la) > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdbold' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-mmdbold.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.la > /usr/bin/install -c .libs/libclipper-mmdbold.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-mmdbold.so.2.0.0 libclipper-mmdbold.so.2 || { rm -f libclipper-mmdbold.so.2 && ln -s libclipper-mmdbold.so.2.0.0 libclipper-mmdbold.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-mmdbold.so.2.0.0 libclipper-mmdbold.so || { rm -f libclipper-mmdbold.so && ln -s libclipper-mmdbold.so.2.0.0 libclipper-mmdbold.so; }; }) > /usr/bin/install -c .libs/libclipper-mmdbold.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.la > /usr/bin/install -c .libs/libclipper-mmdbold.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdbold > mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdbold > cp -p clipper_mmdb.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdbold/clipper_mmdb.h > cp -p clipper_mmdb_wrapper.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdbold/clipper_mmdb_wrapper.h > cp -p clipper_mmdb_types.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdbold/clipper_mmdb_types.h > cp -p container_mmdb.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdbold/container_mmdb.h > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdbold' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdbold' > Making install in minimol > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/minimol' > source='container_minimol.cpp' object='container_minimol.lo' libtool=yes \ > depfile='.deps/container_minimol.Plo' tmpdepfile='.deps/container_minimol.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o container_minimol.lo `test -f 'container_minimol.cpp' || echo './'`container_minimol.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container_minimol.cpp -MT container_minimol.lo -MD -MP -MF .deps/container_minimol.TPlo -fPIC -DPIC -o .libs/container_minimol.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container_minimol.cpp -MT container_minimol.lo -MD -MP -MF .deps/container_minimol.TPlo -o container_minimol.o >/dev/null 2>&1 > source='minimol_data.cpp' object='minimol_data.lo' libtool=yes \ > depfile='.deps/minimol_data.Plo' tmpdepfile='.deps/minimol_data.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o minimol_data.lo `test -f 'minimol_data.cpp' || echo './'`minimol_data.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c minimol_data.cpp -MT minimol_data.lo -MD -MP -MF .deps/minimol_data.TPlo -fPIC -DPIC -o .libs/minimol_data.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c minimol_data.cpp -MT minimol_data.lo -MD -MP -MF .deps/minimol_data.TPlo -o minimol_data.o >/dev/null 2>&1 > source='minimol_seq.cpp' object='minimol_seq.lo' libtool=yes \ > depfile='.deps/minimol_seq.Plo' tmpdepfile='.deps/minimol_seq.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o minimol_seq.lo `test -f 'minimol_seq.cpp' || echo './'`minimol_seq.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c minimol_seq.cpp -MT minimol_seq.lo -MD -MP -MF .deps/minimol_seq.TPlo -fPIC -DPIC -o .libs/minimol_seq.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c minimol_seq.cpp -MT minimol_seq.lo -MD -MP -MF .deps/minimol_seq.TPlo -o minimol_seq.o >/dev/null 2>&1 > source='minimol.cpp' object='minimol.lo' libtool=yes \ > depfile='.deps/minimol.Plo' tmpdepfile='.deps/minimol.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o minimol.lo `test -f 'minimol.cpp' || echo './'`minimol.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c minimol.cpp -MT minimol.lo -MD -MP -MF .deps/minimol.TPlo -fPIC -DPIC -o .libs/minimol.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c minimol.cpp -MT minimol.lo -MD -MP -MF .deps/minimol.TPlo -o minimol.o >/dev/null 2>&1 > source='minimol_io.cpp' object='minimol_io.lo' libtool=yes \ > depfile='.deps/minimol_io.Plo' tmpdepfile='.deps/minimol_io.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o minimol_io.lo `test -f 'minimol_io.cpp' || echo './'`minimol_io.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c minimol_io.cpp -MT minimol_io.lo -MD -MP -MF .deps/minimol_io.TPlo -fPIC -DPIC -o .libs/minimol_io.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c minimol_io.cpp -MT minimol_io.lo -MD -MP -MF .deps/minimol_io.TPlo -o minimol_io.o >/dev/null 2>&1 > source='minimol_utils.cpp' object='minimol_utils.lo' libtool=yes \ > depfile='.deps/minimol_utils.Plo' tmpdepfile='.deps/minimol_utils.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o minimol_utils.lo `test -f 'minimol_utils.cpp' || echo './'`minimol_utils.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c minimol_utils.cpp -MT minimol_utils.lo -MD -MP -MF .deps/minimol_utils.TPlo -fPIC -DPIC -o .libs/minimol_utils.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c minimol_utils.cpp -MT minimol_utils.lo -MD -MP -MF .deps/minimol_utils.TPlo -o minimol_utils.o >/dev/null 2>&1 > /bin/sh ../../libtool --mode=link x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -o libclipper-minimol.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -version-info 2:0 container_minimol.lo minimol_data.lo minimol_seq.lo minimol.lo minimol_io.lo minimol_utils.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/container_minimol.o .libs/minimol_data.o .libs/minimol_seq.o .libs/minimol.o .libs/minimol_io.o .libs/minimol_utils.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -march=core2 -Wl,-soname -Wl,libclipper-minimol.so.2 -o .libs/libclipper-minimol.so.2.0.0 > (cd .libs && rm -f libclipper-minimol.so.2 && ln -s libclipper-minimol.so.2.0.0 libclipper-minimol.so.2) > (cd .libs && rm -f libclipper-minimol.so && ln -s libclipper-minimol.so.2.0.0 libclipper-minimol.so) > ar cru .libs/libclipper-minimol.a container_minimol.o minimol_data.o minimol_seq.o minimol.o minimol_io.o minimol_utils.o > ranlib .libs/libclipper-minimol.a > creating libclipper-minimol.la > (cd .libs && rm -f libclipper-minimol.la && ln -s ../libclipper-minimol.la libclipper-minimol.la) > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/minimol' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-minimol.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.la > /usr/bin/install -c .libs/libclipper-minimol.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-minimol.so.2.0.0 libclipper-minimol.so.2 || { rm -f libclipper-minimol.so.2 && ln -s libclipper-minimol.so.2.0.0 libclipper-minimol.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-minimol.so.2.0.0 libclipper-minimol.so || { rm -f libclipper-minimol.so && ln -s libclipper-minimol.so.2.0.0 libclipper-minimol.so; }; }) > /usr/bin/install -c .libs/libclipper-minimol.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.la > /usr/bin/install -c .libs/libclipper-minimol.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol > mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol > cp -p container_minimol.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/container_minimol.h > cp -p minimol_data.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/minimol_data.h > cp -p minimol_seq.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/minimol_seq.h > cp -p minimol.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/minimol.h > cp -p minimol_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/minimol_io.h > cp -p minimol_utils.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/minimol_utils.h > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/minimol' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/minimol' > Making install in ccp4 > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/ccp4' > source='ccp4_mtz_types.cpp' object='ccp4_mtz_types.lo' libtool=yes \ > depfile='.deps/ccp4_mtz_types.Plo' tmpdepfile='.deps/ccp4_mtz_types.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o ccp4_mtz_types.lo `test -f 'ccp4_mtz_types.cpp' || echo './'`ccp4_mtz_types.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c ccp4_mtz_types.cpp -MT ccp4_mtz_types.lo -MD -MP -MF .deps/ccp4_mtz_types.TPlo -fPIC -DPIC -o .libs/ccp4_mtz_types.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c ccp4_mtz_types.cpp -MT ccp4_mtz_types.lo -MD -MP -MF .deps/ccp4_mtz_types.TPlo -o ccp4_mtz_types.o >/dev/null 2>&1 > source='ccp4_mtz_io.cpp' object='ccp4_mtz_io.lo' libtool=yes \ > depfile='.deps/ccp4_mtz_io.Plo' tmpdepfile='.deps/ccp4_mtz_io.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o ccp4_mtz_io.lo `test -f 'ccp4_mtz_io.cpp' || echo './'`ccp4_mtz_io.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c ccp4_mtz_io.cpp -MT ccp4_mtz_io.lo -MD -MP -MF .deps/ccp4_mtz_io.TPlo -fPIC -DPIC -o .libs/ccp4_mtz_io.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c ccp4_mtz_io.cpp -MT ccp4_mtz_io.lo -MD -MP -MF .deps/ccp4_mtz_io.TPlo -o ccp4_mtz_io.o >/dev/null 2>&1 > source='ccp4_map_io.cpp' object='ccp4_map_io.lo' libtool=yes \ > depfile='.deps/ccp4_map_io.Plo' tmpdepfile='.deps/ccp4_map_io.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o ccp4_map_io.lo `test -f 'ccp4_map_io.cpp' || echo './'`ccp4_map_io.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c ccp4_map_io.cpp -MT ccp4_map_io.lo -MD -MP -MF .deps/ccp4_map_io.TPlo -fPIC -DPIC -o .libs/ccp4_map_io.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c ccp4_map_io.cpp -MT ccp4_map_io.lo -MD -MP -MF .deps/ccp4_map_io.TPlo -o ccp4_map_io.o >/dev/null 2>&1 > source='ccp4_utils.cpp' object='ccp4_utils.lo' libtool=yes \ > depfile='.deps/ccp4_utils.Plo' tmpdepfile='.deps/ccp4_utils.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o ccp4_utils.lo `test -f 'ccp4_utils.cpp' || echo './'`ccp4_utils.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c ccp4_utils.cpp -MT ccp4_utils.lo -MD -MP -MF .deps/ccp4_utils.TPlo -fPIC -DPIC -o .libs/ccp4_utils.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c ccp4_utils.cpp -MT ccp4_utils.lo -MD -MP -MF .deps/ccp4_utils.TPlo -o ccp4_utils.o >/dev/null 2>&1 > /bin/sh ../../libtool --mode=link x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -o libclipper-ccp4.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -version-info 2:0 ccp4_mtz_types.lo ccp4_mtz_io.lo ccp4_map_io.lo ccp4_utils.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/ccp4_mtz_types.o .libs/ccp4_mtz_io.o .libs/ccp4_map_io.o .libs/ccp4_utils.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -march=core2 -Wl,-soname -Wl,libclipper-ccp4.so.2 -o .libs/libclipper-ccp4.so.2.0.0 > (cd .libs && rm -f libclipper-ccp4.so.2 && ln -s libclipper-ccp4.so.2.0.0 libclipper-ccp4.so.2) > (cd .libs && rm -f libclipper-ccp4.so && ln -s libclipper-ccp4.so.2.0.0 libclipper-ccp4.so) > ar cru .libs/libclipper-ccp4.a ccp4_mtz_types.o ccp4_mtz_io.o ccp4_map_io.o ccp4_utils.o > ranlib .libs/libclipper-ccp4.a > creating libclipper-ccp4.la > (cd .libs && rm -f libclipper-ccp4.la && ln -s ../libclipper-ccp4.la libclipper-ccp4.la) > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/ccp4' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-ccp4.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.la > /usr/bin/install -c .libs/libclipper-ccp4.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-ccp4.so.2.0.0 libclipper-ccp4.so.2 || { rm -f libclipper-ccp4.so.2 && ln -s libclipper-ccp4.so.2.0.0 libclipper-ccp4.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-ccp4.so.2.0.0 libclipper-ccp4.so || { rm -f libclipper-ccp4.so && ln -s libclipper-ccp4.so.2.0.0 libclipper-ccp4.so; }; }) > /usr/bin/install -c .libs/libclipper-ccp4.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.la > /usr/bin/install -c .libs/libclipper-ccp4.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/ccp4 > mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/ccp4 > cp -p ccp4_map_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/ccp4/ccp4_map_io.h > cp -p ccp4_mtz_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/ccp4/ccp4_mtz_io.h > cp -p ccp4_mtz_types.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/ccp4/ccp4_mtz_types.h > cp -p ccp4_utils.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/ccp4/ccp4_utils.h > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/ccp4' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/ccp4' > Making install in cns > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cns' > source='cns_hkl_io.cpp' object='cns_hkl_io.lo' libtool=yes \ > depfile='.deps/cns_hkl_io.Plo' tmpdepfile='.deps/cns_hkl_io.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o cns_hkl_io.lo `test -f 'cns_hkl_io.cpp' || echo './'`cns_hkl_io.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c cns_hkl_io.cpp -MT cns_hkl_io.lo -MD -MP -MF .deps/cns_hkl_io.TPlo -fPIC -DPIC -o .libs/cns_hkl_io.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c cns_hkl_io.cpp -MT cns_hkl_io.lo -MD -MP -MF .deps/cns_hkl_io.TPlo -o cns_hkl_io.o >/dev/null 2>&1 > source='cns_map_io.cpp' object='cns_map_io.lo' libtool=yes \ > depfile='.deps/cns_map_io.Plo' tmpdepfile='.deps/cns_map_io.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o cns_map_io.lo `test -f 'cns_map_io.cpp' || echo './'`cns_map_io.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c cns_map_io.cpp -MT cns_map_io.lo -MD -MP -MF .deps/cns_map_io.TPlo -fPIC -DPIC -o .libs/cns_map_io.o > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = unsigned char]': > cns_map_io.cpp:472: instantiated from here > cns_map_io.cpp:201: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:204: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:208: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:211: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:222: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:234: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:242: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:251: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = char]': > cns_map_io.cpp:473: instantiated from here > cns_map_io.cpp:201: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:204: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:208: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:211: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:222: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:234: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:242: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:251: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = short unsigned int]': > cns_map_io.cpp:474: instantiated from here > cns_map_io.cpp:201: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:204: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:208: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:211: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:222: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:234: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:242: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:251: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = short int]': > cns_map_io.cpp:475: instantiated from here > cns_map_io.cpp:201: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:204: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:208: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:211: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:222: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:234: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:242: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:251: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = unsigned int]': > cns_map_io.cpp:476: instantiated from here > cns_map_io.cpp:201: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:204: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:208: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:211: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:222: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:234: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:242: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:251: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = int]': > cns_map_io.cpp:477: instantiated from here > cns_map_io.cpp:201: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:204: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:208: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:211: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:222: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:234: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:242: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:251: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = float]': > cns_map_io.cpp:478: instantiated from here > cns_map_io.cpp:201: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:204: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:208: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:211: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:222: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:234: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:242: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:251: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = double]': > cns_map_io.cpp:479: instantiated from here > cns_map_io.cpp:201: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:204: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:208: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:211: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:222: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:234: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:242: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:251: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = unsigned char]': > cns_map_io.cpp:490: instantiated from here > cns_map_io.cpp:330: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:333: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:337: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:340: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:351: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:363: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:371: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:380: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = char]': > cns_map_io.cpp:491: instantiated from here > cns_map_io.cpp:330: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:333: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:337: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:340: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:351: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:363: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:371: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:380: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = short unsigned int]': > cns_map_io.cpp:492: instantiated from here > cns_map_io.cpp:330: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:333: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:337: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:340: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:351: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:363: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:371: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:380: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = short int]': > cns_map_io.cpp:493: instantiated from here > cns_map_io.cpp:330: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:333: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:337: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:340: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:351: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:363: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:371: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:380: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = unsigned int]': > cns_map_io.cpp:494: instantiated from here > cns_map_io.cpp:330: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:333: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:337: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:340: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:351: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:363: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:371: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:380: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = int]': > cns_map_io.cpp:495: instantiated from here > cns_map_io.cpp:330: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:333: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:337: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:340: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:351: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:363: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:371: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:380: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = float]': > cns_map_io.cpp:496: instantiated from here > cns_map_io.cpp:330: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:333: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:337: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:340: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:351: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:363: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:371: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:380: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = double]': > cns_map_io.cpp:497: instantiated from here > cns_map_io.cpp:330: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:333: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:337: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:340: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:351: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:363: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:371: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > cns_map_io.cpp:380: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c cns_map_io.cpp -MT cns_map_io.lo -MD -MP -MF .deps/cns_map_io.TPlo -o cns_map_io.o >/dev/null 2>&1 > /bin/sh ../../libtool --mode=link x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -o libclipper-cns.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib cns_hkl_io.lo cns_map_io.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/cns_hkl_io.o .libs/cns_map_io.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -march=core2 -Wl,-soname -Wl,libclipper-cns.so.0 -o .libs/libclipper-cns.so.0.0.0 > (cd .libs && rm -f libclipper-cns.so.0 && ln -s libclipper-cns.so.0.0.0 libclipper-cns.so.0) > (cd .libs && rm -f libclipper-cns.so && ln -s libclipper-cns.so.0.0.0 libclipper-cns.so) > ar cru .libs/libclipper-cns.a cns_hkl_io.o cns_map_io.o > ranlib .libs/libclipper-cns.a > creating libclipper-cns.la > (cd .libs && rm -f libclipper-cns.la && ln -s ../libclipper-cns.la libclipper-cns.la) > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cns' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-cns.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.la > /usr/bin/install -c .libs/libclipper-cns.so.0.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.so.0.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-cns.so.0.0.0 libclipper-cns.so.0 || { rm -f libclipper-cns.so.0 && ln -s libclipper-cns.so.0.0.0 libclipper-cns.so.0; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-cns.so.0.0.0 libclipper-cns.so || { rm -f libclipper-cns.so && ln -s libclipper-cns.so.0.0.0 libclipper-cns.so; }; }) > /usr/bin/install -c .libs/libclipper-cns.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.la > /usr/bin/install -c .libs/libclipper-cns.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cns > mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cns > cp -p cns_hkl_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cns/cns_hkl_io.h > cp -p cns_map_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cns/cns_map_io.h > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cns' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cns' > Making install in core > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/core' > source='atomsf.cpp' object='atomsf.lo' libtool=yes \ > depfile='.deps/atomsf.Plo' tmpdepfile='.deps/atomsf.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o atomsf.lo `test -f 'atomsf.cpp' || echo './'`atomsf.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c atomsf.cpp -MT atomsf.lo -MD -MP -MF .deps/atomsf.TPlo -fPIC -DPIC -o .libs/atomsf.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c atomsf.cpp -MT atomsf.lo -MD -MP -MF .deps/atomsf.TPlo -o atomsf.o >/dev/null 2>&1 > source='coords.cpp' object='coords.lo' libtool=yes \ > depfile='.deps/coords.Plo' tmpdepfile='.deps/coords.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o coords.lo `test -f 'coords.cpp' || echo './'`coords.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c coords.cpp -MT coords.lo -MD -MP -MF .deps/coords.TPlo -fPIC -DPIC -o .libs/coords.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c coords.cpp -MT coords.lo -MD -MP -MF .deps/coords.TPlo -o coords.o >/dev/null 2>&1 > source='nxmap_operator.cpp' object='nxmap_operator.lo' libtool=yes \ > depfile='.deps/nxmap_operator.Plo' tmpdepfile='.deps/nxmap_operator.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o nxmap_operator.lo `test -f 'nxmap_operator.cpp' || echo './'`nxmap_operator.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c nxmap_operator.cpp -MT nxmap_operator.lo -MD -MP -MF .deps/nxmap_operator.TPlo -fPIC -DPIC -o .libs/nxmap_operator.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c nxmap_operator.cpp -MT nxmap_operator.lo -MD -MP -MF .deps/nxmap_operator.TPlo -o nxmap_operator.o >/dev/null 2>&1 > source='cell.cpp' object='cell.lo' libtool=yes \ > depfile='.deps/cell.Plo' tmpdepfile='.deps/cell.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o cell.lo `test -f 'cell.cpp' || echo './'`cell.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c cell.cpp -MT cell.lo -MD -MP -MF .deps/cell.TPlo -fPIC -DPIC -o .libs/cell.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c cell.cpp -MT cell.lo -MD -MP -MF .deps/cell.TPlo -o cell.o >/dev/null 2>&1 > source='derivs.cpp' object='derivs.lo' libtool=yes \ > depfile='.deps/derivs.Plo' tmpdepfile='.deps/derivs.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o derivs.lo `test -f 'derivs.cpp' || echo './'`derivs.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c derivs.cpp -MT derivs.lo -MD -MP -MF .deps/derivs.TPlo -fPIC -DPIC -o .libs/derivs.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c derivs.cpp -MT derivs.lo -MD -MP -MF .deps/derivs.TPlo -o derivs.o >/dev/null 2>&1 > source='ramachandran.cpp' object='ramachandran.lo' libtool=yes \ > depfile='.deps/ramachandran.Plo' tmpdepfile='.deps/ramachandran.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o ramachandran.lo `test -f 'ramachandran.cpp' || echo './'`ramachandran.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c ramachandran.cpp -MT ramachandran.lo -MD -MP -MF .deps/ramachandran.TPlo -fPIC -DPIC -o .libs/ramachandran.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c ramachandran.cpp -MT ramachandran.lo -MD -MP -MF .deps/ramachandran.TPlo -o ramachandran.o >/dev/null 2>&1 > source='clipper_instance.cpp' object='clipper_instance.lo' libtool=yes \ > depfile='.deps/clipper_instance.Plo' tmpdepfile='.deps/clipper_instance.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o clipper_instance.lo `test -f 'clipper_instance.cpp' || echo './'`clipper_instance.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_instance.cpp -MT clipper_instance.lo -MD -MP -MF .deps/clipper_instance.TPlo -fPIC -DPIC -o .libs/clipper_instance.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_instance.cpp -MT clipper_instance.lo -MD -MP -MF .deps/clipper_instance.TPlo -o clipper_instance.o >/dev/null 2>&1 > source='fftmap.cpp' object='fftmap.lo' libtool=yes \ > depfile='.deps/fftmap.Plo' tmpdepfile='.deps/fftmap.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o fftmap.lo `test -f 'fftmap.cpp' || echo './'`fftmap.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c fftmap.cpp -MT fftmap.lo -MD -MP -MF .deps/fftmap.TPlo -fPIC -DPIC -o .libs/fftmap.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c fftmap.cpp -MT fftmap.lo -MD -MP -MF .deps/fftmap.TPlo -o fftmap.o >/dev/null 2>&1 > source='resol_basisfn.cpp' object='resol_basisfn.lo' libtool=yes \ > depfile='.deps/resol_basisfn.Plo' tmpdepfile='.deps/resol_basisfn.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o resol_basisfn.lo `test -f 'resol_basisfn.cpp' || echo './'`resol_basisfn.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c resol_basisfn.cpp -MT resol_basisfn.lo -MD -MP -MF .deps/resol_basisfn.TPlo -fPIC -DPIC -o .libs/resol_basisfn.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c resol_basisfn.cpp -MT resol_basisfn.lo -MD -MP -MF .deps/resol_basisfn.TPlo -o resol_basisfn.o >/dev/null 2>&1 > source='clipper_memory.cpp' object='clipper_memory.lo' libtool=yes \ > depfile='.deps/clipper_memory.Plo' tmpdepfile='.deps/clipper_memory.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o clipper_memory.lo `test -f 'clipper_memory.cpp' || echo './'`clipper_memory.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_memory.cpp -MT clipper_memory.lo -MD -MP -MF .deps/clipper_memory.TPlo -fPIC -DPIC -o .libs/clipper_memory.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_memory.cpp -MT clipper_memory.lo -MD -MP -MF .deps/clipper_memory.TPlo -o clipper_memory.o >/dev/null 2>&1 > source='fftmap_sparse.cpp' object='fftmap_sparse.lo' libtool=yes \ > depfile='.deps/fftmap_sparse.Plo' tmpdepfile='.deps/fftmap_sparse.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o fftmap_sparse.lo `test -f 'fftmap_sparse.cpp' || echo './'`fftmap_sparse.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c fftmap_sparse.cpp -MT fftmap_sparse.lo -MD -MP -MF .deps/fftmap_sparse.TPlo -fPIC -DPIC -o .libs/fftmap_sparse.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c fftmap_sparse.cpp -MT fftmap_sparse.lo -MD -MP -MF .deps/fftmap_sparse.TPlo -o fftmap_sparse.o >/dev/null 2>&1 > source='resol_fn.cpp' object='resol_fn.lo' libtool=yes \ > depfile='.deps/resol_fn.Plo' tmpdepfile='.deps/resol_fn.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o resol_fn.lo `test -f 'resol_fn.cpp' || echo './'`resol_fn.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c resol_fn.cpp -MT resol_fn.lo -MD -MP -MF .deps/resol_fn.TPlo -fPIC -DPIC -o .libs/resol_fn.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c resol_fn.cpp -MT resol_fn.lo -MD -MP -MF .deps/resol_fn.TPlo -o resol_fn.o >/dev/null 2>&1 > source='clipper_message.cpp' object='clipper_message.lo' libtool=yes \ > depfile='.deps/clipper_message.Plo' tmpdepfile='.deps/clipper_message.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o clipper_message.lo `test -f 'clipper_message.cpp' || echo './'`clipper_message.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_message.cpp -MT clipper_message.lo -MD -MP -MF .deps/clipper_message.TPlo -fPIC -DPIC -o .libs/clipper_message.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_message.cpp -MT clipper_message.lo -MD -MP -MF .deps/clipper_message.TPlo -o clipper_message.o >/dev/null 2>&1 > source='hkl_compute.cpp' object='hkl_compute.lo' libtool=yes \ > depfile='.deps/hkl_compute.Plo' tmpdepfile='.deps/hkl_compute.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o hkl_compute.lo `test -f 'hkl_compute.cpp' || echo './'`hkl_compute.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_compute.cpp -MT hkl_compute.lo -MD -MP -MF .deps/hkl_compute.TPlo -fPIC -DPIC -o .libs/hkl_compute.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_compute.cpp -MT hkl_compute.lo -MD -MP -MF .deps/hkl_compute.TPlo -o hkl_compute.o >/dev/null 2>&1 > source='resol_targetfn.cpp' object='resol_targetfn.lo' libtool=yes \ > depfile='.deps/resol_targetfn.Plo' tmpdepfile='.deps/resol_targetfn.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o resol_targetfn.lo `test -f 'resol_targetfn.cpp' || echo './'`resol_targetfn.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c resol_targetfn.cpp -MT resol_targetfn.lo -MD -MP -MF .deps/resol_targetfn.TPlo -fPIC -DPIC -o .libs/resol_targetfn.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c resol_targetfn.cpp -MT resol_targetfn.lo -MD -MP -MF .deps/resol_targetfn.TPlo -o resol_targetfn.o >/dev/null 2>&1 > source='clipper_stats.cpp' object='clipper_stats.lo' libtool=yes \ > depfile='.deps/clipper_stats.Plo' tmpdepfile='.deps/clipper_stats.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o clipper_stats.lo `test -f 'clipper_stats.cpp' || echo './'`clipper_stats.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_stats.cpp -MT clipper_stats.lo -MD -MP -MF .deps/clipper_stats.TPlo -fPIC -DPIC -o .libs/clipper_stats.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_stats.cpp -MT clipper_stats.lo -MD -MP -MF .deps/clipper_stats.TPlo -o clipper_stats.o >/dev/null 2>&1 > source='hkl_data.cpp' object='hkl_data.lo' libtool=yes \ > depfile='.deps/hkl_data.Plo' tmpdepfile='.deps/hkl_data.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o hkl_data.lo `test -f 'hkl_data.cpp' || echo './'`hkl_data.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_data.cpp -MT hkl_data.lo -MD -MP -MF .deps/hkl_data.TPlo -fPIC -DPIC -o .libs/hkl_data.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_data.cpp -MT hkl_data.lo -MD -MP -MF .deps/hkl_data.TPlo -o hkl_data.o >/dev/null 2>&1 > source='rotation.cpp' object='rotation.lo' libtool=yes \ > depfile='.deps/rotation.Plo' tmpdepfile='.deps/rotation.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o rotation.lo `test -f 'rotation.cpp' || echo './'`rotation.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c rotation.cpp -MT rotation.lo -MD -MP -MF .deps/rotation.TPlo -fPIC -DPIC -o .libs/rotation.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c rotation.cpp -MT rotation.lo -MD -MP -MF .deps/rotation.TPlo -o rotation.o >/dev/null 2>&1 > source='clipper_test.cpp' object='clipper_test.lo' libtool=yes \ > depfile='.deps/clipper_test.Plo' tmpdepfile='.deps/clipper_test.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o clipper_test.lo `test -f 'clipper_test.cpp' || echo './'`clipper_test.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_test.cpp -MT clipper_test.lo -MD -MP -MF .deps/clipper_test.TPlo -fPIC -DPIC -o .libs/clipper_test.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_test.cpp -MT clipper_test.lo -MD -MP -MF .deps/clipper_test.TPlo -o clipper_test.o >/dev/null 2>&1 > source='hkl_datatypes.cpp' object='hkl_datatypes.lo' libtool=yes \ > depfile='.deps/hkl_datatypes.Plo' tmpdepfile='.deps/hkl_datatypes.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o hkl_datatypes.lo `test -f 'hkl_datatypes.cpp' || echo './'`hkl_datatypes.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_datatypes.cpp -MT hkl_datatypes.lo -MD -MP -MF .deps/hkl_datatypes.TPlo -fPIC -DPIC -o .libs/hkl_datatypes.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_datatypes.cpp -MT hkl_datatypes.lo -MD -MP -MF .deps/hkl_datatypes.TPlo -o hkl_datatypes.o >/dev/null 2>&1 > source='spacegroup.cpp' object='spacegroup.lo' libtool=yes \ > depfile='.deps/spacegroup.Plo' tmpdepfile='.deps/spacegroup.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o spacegroup.lo `test -f 'spacegroup.cpp' || echo './'`spacegroup.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c spacegroup.cpp -MT spacegroup.lo -MD -MP -MF .deps/spacegroup.TPlo -fPIC -DPIC -o .libs/spacegroup.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c spacegroup.cpp -MT spacegroup.lo -MD -MP -MF .deps/spacegroup.TPlo -o spacegroup.o >/dev/null 2>&1 > source='clipper_types.cpp' object='clipper_types.lo' libtool=yes \ > depfile='.deps/clipper_types.Plo' tmpdepfile='.deps/clipper_types.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o clipper_types.lo `test -f 'clipper_types.cpp' || echo './'`clipper_types.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_types.cpp -MT clipper_types.lo -MD -MP -MF .deps/clipper_types.TPlo -fPIC -DPIC -o .libs/clipper_types.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_types.cpp -MT clipper_types.lo -MD -MP -MF .deps/clipper_types.TPlo -o clipper_types.o >/dev/null 2>&1 > source='hkl_info.cpp' object='hkl_info.lo' libtool=yes \ > depfile='.deps/hkl_info.Plo' tmpdepfile='.deps/hkl_info.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o hkl_info.lo `test -f 'hkl_info.cpp' || echo './'`hkl_info.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_info.cpp -MT hkl_info.lo -MD -MP -MF .deps/hkl_info.TPlo -fPIC -DPIC -o .libs/hkl_info.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_info.cpp -MT hkl_info.lo -MD -MP -MF .deps/hkl_info.TPlo -o hkl_info.o >/dev/null 2>&1 > source='spacegroup_data.cpp' object='spacegroup_data.lo' libtool=yes \ > depfile='.deps/spacegroup_data.Plo' tmpdepfile='.deps/spacegroup_data.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o spacegroup_data.lo `test -f 'spacegroup_data.cpp' || echo './'`spacegroup_data.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c spacegroup_data.cpp -MT spacegroup_data.lo -MD -MP -MF .deps/spacegroup_data.TPlo -fPIC -DPIC -o .libs/spacegroup_data.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c spacegroup_data.cpp -MT spacegroup_data.lo -MD -MP -MF .deps/spacegroup_data.TPlo -o spacegroup_data.o >/dev/null 2>&1 > source='clipper_util.cpp' object='clipper_util.lo' libtool=yes \ > depfile='.deps/clipper_util.Plo' tmpdepfile='.deps/clipper_util.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o clipper_util.lo `test -f 'clipper_util.cpp' || echo './'`clipper_util.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_util.cpp -MT clipper_util.lo -MD -MP -MF .deps/clipper_util.TPlo -fPIC -DPIC -o .libs/clipper_util.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c clipper_util.cpp -MT clipper_util.lo -MD -MP -MF .deps/clipper_util.TPlo -o clipper_util.o >/dev/null 2>&1 > source='hkl_lookup.cpp' object='hkl_lookup.lo' libtool=yes \ > depfile='.deps/hkl_lookup.Plo' tmpdepfile='.deps/hkl_lookup.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o hkl_lookup.lo `test -f 'hkl_lookup.cpp' || echo './'`hkl_lookup.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_lookup.cpp -MT hkl_lookup.lo -MD -MP -MF .deps/hkl_lookup.TPlo -fPIC -DPIC -o .libs/hkl_lookup.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_lookup.cpp -MT hkl_lookup.lo -MD -MP -MF .deps/hkl_lookup.TPlo -o hkl_lookup.o >/dev/null 2>&1 > source='symop.cpp' object='symop.lo' libtool=yes \ > depfile='.deps/symop.Plo' tmpdepfile='.deps/symop.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o symop.lo `test -f 'symop.cpp' || echo './'`symop.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c symop.cpp -MT symop.lo -MD -MP -MF .deps/symop.TPlo -fPIC -DPIC -o .libs/symop.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c symop.cpp -MT symop.lo -MD -MP -MF .deps/symop.TPlo -o symop.o >/dev/null 2>&1 > source='container.cpp' object='container.lo' libtool=yes \ > depfile='.deps/container.Plo' tmpdepfile='.deps/container.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o container.lo `test -f 'container.cpp' || echo './'`container.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container.cpp -MT container.lo -MD -MP -MF .deps/container.TPlo -fPIC -DPIC -o .libs/container.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container.cpp -MT container.lo -MD -MP -MF .deps/container.TPlo -o container.o >/dev/null 2>&1 > source='hkl_operators.cpp' object='hkl_operators.lo' libtool=yes \ > depfile='.deps/hkl_operators.Plo' tmpdepfile='.deps/hkl_operators.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o hkl_operators.lo `test -f 'hkl_operators.cpp' || echo './'`hkl_operators.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_operators.cpp -MT hkl_operators.lo -MD -MP -MF .deps/hkl_operators.TPlo -fPIC -DPIC -o .libs/hkl_operators.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c hkl_operators.cpp -MT hkl_operators.lo -MD -MP -MF .deps/hkl_operators.TPlo -o hkl_operators.o >/dev/null 2>&1 > source='container_hkl.cpp' object='container_hkl.lo' libtool=yes \ > depfile='.deps/container_hkl.Plo' tmpdepfile='.deps/container_hkl.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o container_hkl.lo `test -f 'container_hkl.cpp' || echo './'`container_hkl.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container_hkl.cpp -MT container_hkl.lo -MD -MP -MF .deps/container_hkl.TPlo -fPIC -DPIC -o .libs/container_hkl.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container_hkl.cpp -MT container_hkl.lo -MD -MP -MF .deps/container_hkl.TPlo -o container_hkl.o >/dev/null 2>&1 > source='map_interp.cpp' object='map_interp.lo' libtool=yes \ > depfile='.deps/map_interp.Plo' tmpdepfile='.deps/map_interp.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o map_interp.lo `test -f 'map_interp.cpp' || echo './'`map_interp.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c map_interp.cpp -MT map_interp.lo -MD -MP -MF .deps/map_interp.TPlo -fPIC -DPIC -o .libs/map_interp.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c map_interp.cpp -MT map_interp.lo -MD -MP -MF .deps/map_interp.TPlo -o map_interp.o >/dev/null 2>&1 > source='container_map.cpp' object='container_map.lo' libtool=yes \ > depfile='.deps/container_map.Plo' tmpdepfile='.deps/container_map.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o container_map.lo `test -f 'container_map.cpp' || echo './'`container_map.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container_map.cpp -MT container_map.lo -MD -MP -MF .deps/container_map.TPlo -fPIC -DPIC -o .libs/container_map.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container_map.cpp -MT container_map.lo -MD -MP -MF .deps/container_map.TPlo -o container_map.o >/dev/null 2>&1 > source='map_utils.cpp' object='map_utils.lo' libtool=yes \ > depfile='.deps/map_utils.Plo' tmpdepfile='.deps/map_utils.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o map_utils.lo `test -f 'map_utils.cpp' || echo './'`map_utils.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c map_utils.cpp -MT map_utils.lo -MD -MP -MF .deps/map_utils.TPlo -fPIC -DPIC -o .libs/map_utils.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c map_utils.cpp -MT map_utils.lo -MD -MP -MF .deps/map_utils.TPlo -o map_utils.o >/dev/null 2>&1 > source='xmap.cpp' object='xmap.lo' libtool=yes \ > depfile='.deps/xmap.Plo' tmpdepfile='.deps/xmap.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o xmap.lo `test -f 'xmap.cpp' || echo './'`xmap.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c xmap.cpp -MT xmap.lo -MD -MP -MF .deps/xmap.TPlo -fPIC -DPIC -o .libs/xmap.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c xmap.cpp -MT xmap.lo -MD -MP -MF .deps/xmap.TPlo -o xmap.o >/dev/null 2>&1 > source='container_types.cpp' object='container_types.lo' libtool=yes \ > depfile='.deps/container_types.Plo' tmpdepfile='.deps/container_types.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o container_types.lo `test -f 'container_types.cpp' || echo './'`container_types.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container_types.cpp -MT container_types.lo -MD -MP -MF .deps/container_types.TPlo -fPIC -DPIC -o .libs/container_types.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c container_types.cpp -MT container_types.lo -MD -MP -MF .deps/container_types.TPlo -o container_types.o >/dev/null 2>&1 > source='nxmap.cpp' object='nxmap.lo' libtool=yes \ > depfile='.deps/nxmap.Plo' tmpdepfile='.deps/nxmap.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o nxmap.lo `test -f 'nxmap.cpp' || echo './'`nxmap.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c nxmap.cpp -MT nxmap.lo -MD -MP -MF .deps/nxmap.TPlo -fPIC -DPIC -o .libs/nxmap.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c nxmap.cpp -MT nxmap.lo -MD -MP -MF .deps/nxmap.TPlo -o nxmap.o >/dev/null 2>&1 > source='test_core.cpp' object='test_core.lo' libtool=yes \ > depfile='.deps/test_core.Plo' tmpdepfile='.deps/test_core.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o test_core.lo `test -f 'test_core.cpp' || echo './'`test_core.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c test_core.cpp -MT test_core.lo -MD -MP -MF .deps/test_core.TPlo -fPIC -DPIC -o .libs/test_core.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c test_core.cpp -MT test_core.lo -MD -MP -MF .deps/test_core.TPlo -o test_core.o >/dev/null 2>&1 > source='test_data.cpp' object='test_data.lo' libtool=yes \ > depfile='.deps/test_data.Plo' tmpdepfile='.deps/test_data.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c -o test_data.lo `test -f 'test_data.cpp' || echo './'`test_data.cpp > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c test_data.cpp -MT test_data.lo -MD -MP -MF .deps/test_data.TPlo -fPIC -DPIC -o .libs/test_data.o > x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/include -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -c test_data.cpp -MT test_data.lo -MD -MP -MF .deps/test_data.TPlo -o test_data.o >/dev/null 2>&1 > /bin/sh ../../libtool --mode=link x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -o libclipper-core.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -version-info 2:0 atomsf.lo coords.lo nxmap_operator.lo cell.lo derivs.lo ramachandran.lo clipper_instance.lo fftmap.lo resol_basisfn.lo clipper_memory.lo fftmap_sparse.lo resol_fn.lo clipper_message.lo hkl_compute.lo resol_targetfn.lo clipper_stats.lo hkl_data.lo rotation.lo clipper_test.lo hkl_datatypes.lo spacegroup.lo clipper_types.lo hkl_info.lo spacegroup_data.lo clipper_util.lo hkl_lookup.lo symop.lo container.lo hkl_operators.lo container_hkl.lo map_interp.lo container_map.lo map_utils.lo xmap.lo container_types.lo nxmap.lo test_core.lo test_data.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/atomsf.o .libs/coords.o .libs/nxmap_operator.o .libs/cell.o .libs/derivs.o .libs/ramachandran.o .libs/clipper_instance.o .libs/fftmap.o .libs/resol_basisfn.o .libs/clipper_memory.o .libs/fftmap_sparse.o .libs/resol_fn.o .libs/clipper_message.o .libs/hkl_compute.o .libs/resol_targetfn.o .libs/clipper_stats.o .libs/hkl_data.o .libs/rotation.o .libs/clipper_test.o .libs/hkl_datatypes.o .libs/spacegroup.o .libs/clipper_types.o .libs/hkl_info.o .libs/spacegroup_data.o .libs/clipper_util.o .libs/hkl_lookup.o .libs/symop.o .libs/container.o .libs/hkl_operators.o .libs/container_hkl.o .libs/map_interp.o .libs/container_map.o .libs/map_utils.o .libs/xmap.o .libs/container_types.o .libs/nxmap.o .libs/test_core.o .libs/test_data.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../.! ./lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -march=core2 -Wl,-soname -Wl,libclipper-core.so.2 -o .libs/libclipper-core.so.2.0.0 > (cd .libs && rm -f libclipper-core.so.2 && ln -s libclipper-core.so.2.0.0 libclipper-core.so.2) > (cd .libs && rm -f libclipper-core.so && ln -s libclipper-core.so.2.0.0 libclipper-core.so) > ar cru .libs/libclipper-core.a atomsf.o coords.o nxmap_operator.o cell.o derivs.o ramachandran.o clipper_instance.o fftmap.o resol_basisfn.o clipper_memory.o fftmap_sparse.o resol_fn.o clipper_message.o hkl_compute.o resol_targetfn.o clipper_stats.o hkl_data.o rotation.o clipper_test.o hkl_datatypes.o spacegroup.o clipper_types.o hkl_info.o spacegroup_data.o clipper_util.o hkl_lookup.o symop.o container.o hkl_operators.o container_hkl.o map_interp.o container_map.o map_utils.o xmap.o container_types.o nxmap.o test_core.o test_data.o > ranlib .libs/libclipper-core.a > creating libclipper-core.la > (cd .libs && rm -f libclipper-core.la && ln -s ../libclipper-core.la libclipper-core.la) > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/core' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-core.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.la > /usr/bin/install -c .libs/libclipper-core.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-core.so.2.0.0 libclipper-core.so.2 || { rm -f libclipper-core.so.2 && ln -s libclipper-core.so.2.0.0 libclipper-core.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-core.so.2.0.0 libclipper-core.so || { rm -f libclipper-core.so && ln -s libclipper-core.so.2.0.0 libclipper-core.so; }; }) > /usr/bin/install -c .libs/libclipper-core.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.la > /usr/bin/install -c .libs/libclipper-core.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core > mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core > cp -p atomsf.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/atomsf.h > cp -p container_types.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/container_types.h > cp -p nxmap_operator.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/nxmap_operator.h > cp -p cell.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/cell.h > cp -p coords.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/coords.h > cp -p ramachandran.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/ramachandran.h > cp -p clipper_instance.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_instance.h > cp -p derivs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/derivs.h > cp -p resol_basisfn.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/resol_basisfn.h > cp -p clipper_memory.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_memory.h > cp -p fftmap.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/fftmap.h > cp -p resol_fn.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/resol_fn.h > cp -p clipper_message.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_message.h > cp -p fftmap_sparse.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/fftmap_sparse.h > cp -p resol_targetfn.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/resol_targetfn.h > cp -p clipper_precision.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_precision.h > cp -p hkl_compute.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_compute.h > cp -p rotation.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/rotation.h > cp -p clipper_stats.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_stats.h > cp -p hkl_data.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_data.h > cp -p spacegroup.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/spacegroup.h > cp -p clipper_sysdep.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_sysdep.h > cp -p hkl_datatypes.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_datatypes.h > cp -p spacegroup_data.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/spacegroup_data.h > cp -p clipper_test.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_test.h > cp -p hkl_info.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_info.h > cp -p symop.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/symop.h > cp -p clipper_types.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_types.h > cp -p hkl_lookup.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_lookup.h > cp -p clipper_util.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_util.h > cp -p hkl_operators.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_operators.h > cp -p container.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/container.h > cp -p map_interp.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/map_interp.h > cp -p xmap.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/xmap.h > cp -p container_hkl.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/container_hkl.h > cp -p map_utils.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/map_utils.h > cp -p container_map.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/container_map.h > cp -p nxmap.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/nxmap.h > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/core' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/core' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > make[5]: Nothing to be done for `install-exec-am'. > /bin/sh ../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper > cp -p clipper-ccp4.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-ccp4.h > cp -p clipper-contrib.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-contrib.h > cp -p clipper-phs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-phs.h > cp -p clipper-cctbx.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-cctbx.h > cp -p clipper-minimol.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-minimol.h > cp -p clipper.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper.h > cp -p clipper-cif.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-cif.h > cp -p clipper-mmdb.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-mmdb.h > cp -p minimal-clipper-hkl.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimal-clipper-hkl.h > cp -p clipper-cns.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-cns.h > cp -p clipper-mmdbold.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-mmdbold.h > cp -p minimal-clipper-map.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimal-clipper-map.h > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > Making install in examples > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/examples' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/examples' > make[4]: Nothing to be done for `install-exec-am'. > make[4]: Nothing to be done for `install-data-am'. > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/examples' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/examples' > Making install in dox > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/dox' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/dox' > make[4]: Nothing to be done for `install-exec-am'. > make[4]: Nothing to be done for `install-data-am'. > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/dox' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/dox' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper' > /bin/sh ./mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin > mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin > /usr/bin/install -c clipper-config /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/clipper-config > make[4]: Nothing to be done for `install-data-am'. > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper' > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > Making install in CBFlib > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > Making install in src > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib/src' > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf.lo -MD -MP -MF .deps/cbf.Tpo -c -o cbf.lo cbf.c > mkdir .libs > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf.lo -MD -MP -MF .deps/cbf.Tpo -c cbf.c -fPIC -DPIC -o .libs/cbf.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf.lo -MD -MP -MF .deps/cbf.Tpo -c cbf.c -fPIC -DPIC -o cbf.o >/dev/null 2>&1 > mv -f .deps/cbf.Tpo .deps/cbf.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_alloc.lo -MD -MP -MF .deps/cbf_alloc.Tpo -c -o cbf_alloc.lo cbf_alloc.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_alloc.lo -MD -MP -MF .deps/cbf_alloc.Tpo -c cbf_alloc.c -fPIC -DPIC -o .libs/cbf_alloc.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_alloc.lo -MD -MP -MF .deps/cbf_alloc.Tpo -c cbf_alloc.c -fPIC -DPIC -o cbf_alloc.o >/dev/null 2>&1 > mv -f .deps/cbf_alloc.Tpo .deps/cbf_alloc.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_ascii.lo -MD -MP -MF .deps/cbf_ascii.Tpo -c -o cbf_ascii.lo cbf_ascii.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_ascii.lo -MD -MP -MF .deps/cbf_ascii.Tpo -c cbf_ascii.c -fPIC -DPIC -o .libs/cbf_ascii.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_ascii.lo -MD -MP -MF .deps/cbf_ascii.Tpo -c cbf_ascii.c -fPIC -DPIC -o cbf_ascii.o >/dev/null 2>&1 > mv -f .deps/cbf_ascii.Tpo .deps/cbf_ascii.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_binary.lo -MD -MP -MF .deps/cbf_binary.Tpo -c -o cbf_binary.lo cbf_binary.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_binary.lo -MD -MP -MF .deps/cbf_binary.Tpo -c cbf_binary.c -fPIC -DPIC -o .libs/cbf_binary.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_binary.lo -MD -MP -MF .deps/cbf_binary.Tpo -c cbf_binary.c -fPIC -DPIC -o cbf_binary.o >/dev/null 2>&1 > mv -f .deps/cbf_binary.Tpo .deps/cbf_binary.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_byte_offset.lo -MD -MP -MF .deps/cbf_byte_offset.Tpo -c -o cbf_byte_offset.lo cbf_byte_offset.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_byte_offset.lo -MD -MP -MF .deps/cbf_byte_offset.Tpo -c cbf_byte_offset.c -fPIC -DPIC -o .libs/cbf_byte_offset.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_byte_offset.lo -MD -MP -MF .deps/cbf_byte_offset.Tpo -c cbf_byte_offset.c -fPIC -DPIC -o cbf_byte_offset.o >/dev/null 2>&1 > mv -f .deps/cbf_byte_offset.Tpo .deps/cbf_byte_offset.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_canonical.lo -MD -MP -MF .deps/cbf_canonical.Tpo -c -o cbf_canonical.lo cbf_canonical.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_canonical.lo -MD -MP -MF .deps/cbf_canonical.Tpo -c cbf_canonical.c -fPIC -DPIC -o .libs/cbf_canonical.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_canonical.lo -MD -MP -MF .deps/cbf_canonical.Tpo -c cbf_canonical.c -fPIC -DPIC -o cbf_canonical.o >/dev/null 2>&1 > mv -f .deps/cbf_canonical.Tpo .deps/cbf_canonical.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_codes.lo -MD -MP -MF .deps/cbf_codes.Tpo -c -o cbf_codes.lo cbf_codes.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_codes.lo -MD -MP -MF .deps/cbf_codes.Tpo -c cbf_codes.c -fPIC -DPIC -o .libs/cbf_codes.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_codes.lo -MD -MP -MF .deps/cbf_codes.Tpo -c cbf_codes.c -fPIC -DPIC -o cbf_codes.o >/dev/null 2>&1 > mv -f .deps/cbf_codes.Tpo .deps/cbf_codes.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_compress.lo -MD -MP -MF .deps/cbf_compress.Tpo -c -o cbf_compress.lo cbf_compress.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_compress.lo -MD -MP -MF .deps/cbf_compress.Tpo -c cbf_compress.c -fPIC -DPIC -o .libs/cbf_compress.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_compress.lo -MD -MP -MF .deps/cbf_compress.Tpo -c cbf_compress.c -fPIC -DPIC -o cbf_compress.o >/dev/null 2>&1 > mv -f .deps/cbf_compress.Tpo .deps/cbf_compress.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_context.lo -MD -MP -MF .deps/cbf_context.Tpo -c -o cbf_context.lo cbf_context.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_context.lo -MD -MP -MF .deps/cbf_context.Tpo -c cbf_context.c -fPIC -DPIC -o .libs/cbf_context.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_context.lo -MD -MP -MF .deps/cbf_context.Tpo -c cbf_context.c -fPIC -DPIC -o cbf_context.o >/dev/null 2>&1 > mv -f .deps/cbf_context.Tpo .deps/cbf_context.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_file.lo -MD -MP -MF .deps/cbf_file.Tpo -c -o cbf_file.lo cbf_file.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_file.lo -MD -MP -MF .deps/cbf_file.Tpo -c cbf_file.c -fPIC -DPIC -o .libs/cbf_file.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_file.lo -MD -MP -MF .deps/cbf_file.Tpo -c cbf_file.c -fPIC -DPIC -o cbf_file.o >/dev/null 2>&1 > mv -f .deps/cbf_file.Tpo .deps/cbf_file.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_lex.lo -MD -MP -MF .deps/cbf_lex.Tpo -c -o cbf_lex.lo cbf_lex.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_lex.lo -MD -MP -MF .deps/cbf_lex.Tpo -c cbf_lex.c -fPIC -DPIC -o .libs/cbf_lex.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_lex.lo -MD -MP -MF .deps/cbf_lex.Tpo -c cbf_lex.c -fPIC -DPIC -o cbf_lex.o >/dev/null 2>&1 > mv -f .deps/cbf_lex.Tpo .deps/cbf_lex.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_packed.lo -MD -MP -MF .deps/cbf_packed.Tpo -c -o cbf_packed.lo cbf_packed.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_packed.lo -MD -MP -MF .deps/cbf_packed.Tpo -c cbf_packed.c -fPIC -DPIC -o .libs/cbf_packed.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_packed.lo -MD -MP -MF .deps/cbf_packed.Tpo -c cbf_packed.c -fPIC -DPIC -o cbf_packed.o >/dev/null 2>&1 > mv -f .deps/cbf_packed.Tpo .deps/cbf_packed.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_predictor.lo -MD -MP -MF .deps/cbf_predictor.Tpo -c -o cbf_predictor.lo cbf_predictor.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_predictor.lo -MD -MP -MF .deps/cbf_predictor.Tpo -c cbf_predictor.c -fPIC -DPIC -o .libs/cbf_predictor.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_predictor.lo -MD -MP -MF .deps/cbf_predictor.Tpo -c cbf_predictor.c -fPIC -DPIC -o cbf_predictor.o >/dev/null 2>&1 > mv -f .deps/cbf_predictor.Tpo .deps/cbf_predictor.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_read_binary.lo -MD -MP -MF .deps/cbf_read_binary.Tpo -c -o cbf_read_binary.lo cbf_read_binary.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_read_binary.lo -MD -MP -MF .deps/cbf_read_binary.Tpo -c cbf_read_binary.c -fPIC -DPIC -o .libs/cbf_read_binary.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_read_binary.lo -MD -MP -MF .deps/cbf_read_binary.Tpo -c cbf_read_binary.c -fPIC -DPIC -o cbf_read_binary.o >/dev/null 2>&1 > mv -f .deps/cbf_read_binary.Tpo .deps/cbf_read_binary.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_read_mime.lo -MD -MP -MF .deps/cbf_read_mime.Tpo -c -o cbf_read_mime.lo cbf_read_mime.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_read_mime.lo -MD -MP -MF .deps/cbf_read_mime.Tpo -c cbf_read_mime.c -fPIC -DPIC -o .libs/cbf_read_mime.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_read_mime.lo -MD -MP -MF .deps/cbf_read_mime.Tpo -c cbf_read_mime.c -fPIC -DPIC -o cbf_read_mime.o >/dev/null 2>&1 > mv -f .deps/cbf_read_mime.Tpo .deps/cbf_read_mime.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_simple.lo -MD -MP -MF .deps/cbf_simple.Tpo -c -o cbf_simple.lo cbf_simple.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_simple.lo -MD -MP -MF .deps/cbf_simple.Tpo -c cbf_simple.c -fPIC -DPIC -o .libs/cbf_simple.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_simple.lo -MD -MP -MF .deps/cbf_simple.Tpo -c cbf_simple.c -fPIC -DPIC -o cbf_simple.o >/dev/null 2>&1 > mv -f .deps/cbf_simple.Tpo .deps/cbf_simple.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_string.lo -MD -MP -MF .deps/cbf_string.Tpo -c -o cbf_string.lo cbf_string.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_string.lo -MD -MP -MF .deps/cbf_string.Tpo -c cbf_string.c -fPIC -DPIC -o .libs/cbf_string.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_string.lo -MD -MP -MF .deps/cbf_string.Tpo -c cbf_string.c -fPIC -DPIC -o cbf_string.o >/dev/null 2>&1 > mv -f .deps/cbf_string.Tpo .deps/cbf_string.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_stx.lo -MD -MP -MF .deps/cbf_stx.Tpo -c -o cbf_stx.lo cbf_stx.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_stx.lo -MD -MP -MF .deps/cbf_stx.Tpo -c cbf_stx.c -fPIC -DPIC -o .libs/cbf_stx.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_stx.lo -MD -MP -MF .deps/cbf_stx.Tpo -c cbf_stx.c -fPIC -DPIC -o cbf_stx.o >/dev/null 2>&1 > mv -f .deps/cbf_stx.Tpo .deps/cbf_stx.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_tree.lo -MD -MP -MF .deps/cbf_tree.Tpo -c -o cbf_tree.lo cbf_tree.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_tree.lo -MD -MP -MF .deps/cbf_tree.Tpo -c cbf_tree.c -fPIC -DPIC -o .libs/cbf_tree.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_tree.lo -MD -MP -MF .deps/cbf_tree.Tpo -c cbf_tree.c -fPIC -DPIC -o cbf_tree.o >/dev/null 2>&1 > mv -f .deps/cbf_tree.Tpo .deps/cbf_tree.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_uncompressed.lo -MD -MP -MF .deps/cbf_uncompressed.Tpo -c -o cbf_uncompressed.lo cbf_uncompressed.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_uncompressed.lo -MD -MP -MF .deps/cbf_uncompressed.Tpo -c cbf_uncompressed.c -fPIC -DPIC -o .libs/cbf_uncompressed.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_uncompressed.lo -MD -MP -MF .deps/cbf_uncompressed.Tpo -c cbf_uncompressed.c -fPIC -DPIC -o cbf_uncompressed.o >/dev/null 2>&1 > mv -f .deps/cbf_uncompressed.Tpo .deps/cbf_uncompressed.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_write.lo -MD -MP -MF .deps/cbf_write.Tpo -c -o cbf_write.lo cbf_write.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_write.lo -MD -MP -MF .deps/cbf_write.Tpo -c cbf_write.c -fPIC -DPIC -o .libs/cbf_write.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_write.lo -MD -MP -MF .deps/cbf_write.Tpo -c cbf_write.c -fPIC -DPIC -o cbf_write.o >/dev/null 2>&1 > mv -f .deps/cbf_write.Tpo .deps/cbf_write.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_write_binary.lo -MD -MP -MF .deps/cbf_write_binary.Tpo -c -o cbf_write_binary.lo cbf_write_binary.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_write_binary.lo -MD -MP -MF .deps/cbf_write_binary.Tpo -c cbf_write_binary.c -fPIC -DPIC -o .libs/cbf_write_binary.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT cbf_write_binary.lo -MD -MP -MF .deps/cbf_write_binary.Tpo -c cbf_write_binary.c -fPIC -DPIC -o cbf_write_binary.o >/dev/null 2>&1 > mv -f .deps/cbf_write_binary.Tpo .deps/cbf_write_binary.Plo > /bin/sh ../../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT md5c.lo -MD -MP -MF .deps/md5c.Tpo -c -o md5c.lo md5c.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT md5c.lo -MD -MP -MF .deps/md5c.Tpo -c md5c.c -fPIC -DPIC -o .libs/md5c.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -I../include -g -O0 -MT md5c.lo -MD -MP -MF .deps/md5c.Tpo -c md5c.c -fPIC -DPIC -o md5c.o >/dev/null 2>&1 > mv -f .deps/md5c.Tpo .deps/md5c.Plo > /bin/sh ../../libtool --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -I../include -g -O0 -static -o libcbf.la cbf.lo cbf_alloc.lo cbf_ascii.lo cbf_binary.lo cbf_byte_offset.lo cbf_canonical.lo cbf_codes.lo cbf_compress.lo cbf_context.lo cbf_file.lo cbf_lex.lo cbf_packed.lo cbf_predictor.lo cbf_read_binary.lo cbf_read_mime.lo cbf_simple.lo cbf_string.lo cbf_stx.lo cbf_tree.lo cbf_uncompressed.lo cbf_write.lo cbf_write_binary.lo md5c.lo -lm > ar cru .libs/libcbf.a cbf.o cbf_alloc.o cbf_ascii.o cbf_binary.o cbf_byte_offset.o cbf_canonical.o cbf_codes.o cbf_compress.o cbf_context.o cbf_file.o cbf_lex.o cbf_packed.o cbf_predictor.o cbf_read_binary.o cbf_read_mime.o cbf_simple.o cbf_string.o cbf_stx.o cbf_tree.o cbf_uncompressed.o cbf_write.o cbf_write_binary.o md5c.o > ranlib .libs/libcbf.a > creating libcbf.la > (cd .libs && rm -f libcbf.la && ln -s ../libcbf.la libcbf.la) > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib/src' > make[6]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[6]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[5]: Nothing to be done for `install-exec-am'. > make[5]: Nothing to be done for `install-data-am'. > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib/src' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib/src' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[6]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[6]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[5]: Nothing to be done for `install-exec-am'. > make[5]: Nothing to be done for `install-data-am'. > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > Making install in Bruker > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Bruker' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > /bin/sh ../libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT FrmRoutines.lo -MD -MP -MF .deps/FrmRoutines.Tpo -c -o FrmRoutines.lo FrmRoutines.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT FrmRoutines.lo -MD -MP -MF .deps/FrmRoutines.Tpo -c FrmRoutines.cpp -fPIC -DPIC -o .libs/FrmRoutines.o > FrmRoutines.cpp: In function 'long int* ReadFrameFile(char*, FRM_HEADER*)': > FrmRoutines.cpp:91: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:97: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:108: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:108: warning: format '%d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:114: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:116: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:132: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:137: warning: format '%d' expects type 'int*', but argument 3 has type 'long int*' > FrmRoutines.cpp:137: warning: format '%d' expects type 'int*', but argument 4 has type 'long int*' > FrmRoutines.cpp:137: warning: format '%d' expects type 'int*', but argument 5 has type 'long int*' > FrmRoutines.cpp:139: warning: format '%d' expects type 'int*', but argument 3 has type 'long int*' > FrmRoutines.cpp:139: warning: format '%d' expects type 'int*', but argument 4 has type 'long int*' > FrmRoutines.cpp:149: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:161: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:173: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:197: warning: format '%-35ld' expects type 'long int', but argument 4 has type 'int' > FrmRoutines.cpp:199: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:215: warning: format '%-35ld' expects type 'long int', but argument 4 has type 'int' > FrmRoutines.cpp:217: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:244: warning: format '%d' expects type 'int*', but argument 3 has type 'long int*' > FrmRoutines.cpp:246: warning: format '%d' expects type 'int*', but argument 3 has type 'long int*' > FrmRoutines.cpp:246: warning: format '%d' expects type 'int*', but argument 4 has type 'long int*' > FrmRoutines.cpp:246: warning: format '%d' expects type 'int*', but argument 5 has type 'long int*' > FrmRoutines.cpp: In function 'long int SaveFrameFile(char*, FRM_HEADER*, long int*)': > FrmRoutines.cpp:349: warning: unknown conversion type character 'I' in format > FrmRoutines.cpp:349: warning: unknown conversion type character 'I' in format > FrmRoutines.cpp:351: warning: unknown conversion type character 'I' in format > FrmRoutines.cpp:351: warning: unknown conversion type character 'I' in format > FrmRoutines.cpp:354: warning: format '%12d' expects type 'int*', but argument 3 has type 'INT64*' > FrmRoutines.cpp:354: warning: format '%12d' expects type 'int*', but argument 4 has type 'INT64*' > FrmRoutines.cpp:354: warning: format '%12d' expects type 'int*', but argument 5 has type 'INT64*' > FrmRoutines.cpp:354: warning: format '%12d' expects type 'int*', but argument 6 has type 'INT64*' > FrmRoutines.cpp:354: warning: format '%12d' expects type 'int*', but argument 7 has type 'INT64*' > FrmRoutines.cpp:356: warning: format '%12d' expects type 'int', but argument 3 has type 'INT64' > FrmRoutines.cpp:356: warning: format '%12d' expects type 'int', but argument 4 has type 'INT64' > FrmRoutines.cpp:356: warning: format '%12d' expects type 'int', but argument 5 has type 'INT64' > FrmRoutines.cpp:356: warning: format '%12d' expects type 'int', but argument 6 has type 'INT64' > FrmRoutines.cpp:356: warning: format '%12d' expects type 'int', but argument 7 has type 'INT64' > FrmRoutines.cpp: In function 'long int SaveFrameFile_Old(char*, FRM_HEADER*, long int*)': > FrmRoutines.cpp:448: warning: format '%9d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:448: warning: format '%7d' expects type 'int', but argument 4 has type 'long int' > FrmRoutines.cpp:457: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:461: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:482: warning: format '%9d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:482: warning: format '%7d' expects type 'int', but argument 4 has type 'long int' > FrmRoutines.cpp:491: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:495: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:501: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:505: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:522: warning: format '%d' expects type 'int*', but argument 3 has type 'long int*' > FrmRoutines.cpp:524: warning: format '%d' expects type 'int*', but argument 3 has type 'long int*' > FrmRoutines.cpp:524: warning: format '%d' expects type 'int*', but argument 4 has type 'long int*' > FrmRoutines.cpp:524: warning: format '%d' expects type 'int*', but argument 5 has type 'long int*' > FrmRoutines.cpp:543: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FrmRoutines.cpp:559: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:566: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:578: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:585: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:592: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp: In function 'long int SaveFrameFile_New(char*, FRM_HEADER*, long int*)': > FrmRoutines.cpp:634: warning: format '%-72ld' expects type 'long int', but argument 3 has type 'int' > FrmRoutines.cpp:638: warning: format '%d' expects type 'int*', but argument 3 has type 'long int*' > FrmRoutines.cpp:638: warning: format '%d' expects type 'int*', but argument 4 has type 'long int*' > FrmRoutines.cpp:638: warning: format '%d' expects type 'int*', but argument 5 has type 'long int*' > FrmRoutines.cpp:873: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:880: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:892: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:900: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:910: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:920: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FrmRoutines.cpp:928: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT FrmRoutines.lo -MD -MP -MF .deps/FrmRoutines.Tpo -c FrmRoutines.cpp -fPIC -DPIC -o FrmRoutines.o >/dev/null 2>&1 > mv -f .deps/FrmRoutines.Tpo .deps/FrmRoutines.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT FRM_LIB.lo -MD -MP -MF .deps/FRM_LIB.Tpo -c -o FRM_LIB.lo FRM_LIB.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT FRM_LIB.lo -MD -MP -MF .deps/FRM_LIB.Tpo -c FRM_LIB.c -fPIC -DPIC -o .libs/FRM_LIB.o > FRM_LIB.c: In function 'frm_open_file': > FRM_LIB.c:134: warning: format '%d' expects type 'int *', but argument 3 has type 'long int *' > FRM_LIB.c: In function 'frm_shrink': > FRM_LIB.c:589: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:591: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:599: warning: format '%12d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:599: warning: format '%12d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c:599: warning: format '%12d' expects type 'int', but argument 5 has type 'long int' > FRM_LIB.c:599: warning: format '%12d' expects type 'int', but argument 6 has type 'long int' > FRM_LIB.c:599: warning: format '%12d' expects type 'int', but argument 7 has type 'long int' > FRM_LIB.c:599: warning: format '%12d' expects type 'int', but argument 8 has type 'long int' > FRM_LIB.c:601: warning: format '%12d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:601: warning: format '%12d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c: In function 'frm_convert_header_longs': > FRM_LIB.c:619: warning: format '%d' expects type 'int *', but argument 3 has type 'long int *' > FRM_LIB.c:619: warning: format '%d' expects type 'int *', but argument 4 has type 'long int *' > FRM_LIB.c:619: warning: format '%d' expects type 'int *', but argument 5 has type 'long int *' > FRM_LIB.c:619: warning: format '%d' expects type 'int *', but argument 6 has type 'long int *' > FRM_LIB.c:619: warning: format '%d' expects type 'int *', but argument 7 has type 'long int *' > FRM_LIB.c:619: warning: format '%d' expects type 'int *', but argument 8 has type 'long int *' > FRM_LIB.c:629: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:639: warning: format '%12d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:639: warning: format '%12d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c:649: warning: format '%12d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:649: warning: format '%12d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c:649: warning: format '%12d' expects type 'int', but argument 5 has type 'long int' > FRM_LIB.c:661: warning: format '%12d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:661: warning: format '%12d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c:661: warning: format '%12d' expects type 'int', but argument 5 has type 'long int' > FRM_LIB.c:661: warning: format '%12d' expects type 'int', but argument 6 has type 'long int' > FRM_LIB.c:673: warning: format '%12d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:673: warning: format '%12d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c:673: warning: format '%12d' expects type 'int', but argument 5 has type 'long int' > FRM_LIB.c:673: warning: format '%12d' expects type 'int', but argument 6 has type 'long int' > FRM_LIB.c:673: warning: format '%12d' expects type 'int', but argument 7 has type 'long int' > FRM_LIB.c:685: warning: format '%12d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:685: warning: format '%12d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c:685: warning: format '%12d' expects type 'int', but argument 5 has type 'long int' > FRM_LIB.c:685: warning: format '%12d' expects type 'int', but argument 6 has type 'long int' > FRM_LIB.c:685: warning: format '%12d' expects type 'int', but argument 7 has type 'long int' > FRM_LIB.c:685: warning: format '%12d' expects type 'int', but argument 8 has type 'long int' > FRM_LIB.c: In function 'frm_convert_header': > FRM_LIB.c:797: warning: format '%-72ld' expects type 'long int', but argument 3 has type 'int' > FRM_LIB.c: In function 'frm_trim': > FRM_LIB.c:997: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FRM_LIB.c:997: warning: format '%d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:997: warning: format '%d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c:997: warning: format '%d' expects type 'int', but argument 5 has type 'long int' > FRM_LIB.c:1021: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:1023: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c: In function 'frm_truncate': > FRM_LIB.c:1082: warning: format '%d' expects type 'int', but argument 2 has type 'long int' > FRM_LIB.c:1082: warning: format '%d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:1082: warning: format '%d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c:1082: warning: format '%d' expects type 'int', but argument 5 has type 'long int' > FRM_LIB.c:1106: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:1108: warning: format '%10d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:1116: warning: format '%12d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:1116: warning: format '%12d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c:1116: warning: format '%12d' expects type 'int', but argument 5 has type 'long int' > FRM_LIB.c:1116: warning: format '%12d' expects type 'int', but argument 6 has type 'long int' > FRM_LIB.c:1116: warning: format '%12d' expects type 'int', but argument 7 has type 'long int' > FRM_LIB.c:1116: warning: format '%12d' expects type 'int', but argument 8 has type 'long int' > FRM_LIB.c:1118: warning: format '%12d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:1118: warning: format '%12d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c: In function 'frm_reorientate': > FRM_LIB.c:1302: warning: format '%12d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:1302: warning: format '%12d' expects type 'int', but argument 4 has type 'long int' > FRM_LIB.c:1302: warning: format '%12d' expects type 'int', but argument 5 has type 'long int' > FRM_LIB.c:1302: warning: format '%12d' expects type 'int', but argument 6 has type 'long int' > FRM_LIB.c:1302: warning: format '%12d' expects type 'int', but argument 7 has type 'long int' > FRM_LIB.c:1302: warning: format '%12d' expects type 'int', but argument 8 has type 'long int' > FRM_LIB.c:1304: warning: format '%12d' expects type 'int', but argument 3 has type 'long int' > FRM_LIB.c:1304: warning: format '%12d' expects type 'int', but argument 4 has type 'long int' > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT FRM_LIB.lo -MD -MP -MF .deps/FRM_LIB.Tpo -c FRM_LIB.c -fPIC -DPIC -o FRM_LIB.o >/dev/null 2>&1 > mv -f .deps/FRM_LIB.Tpo .deps/FRM_LIB.Plo > /bin/sh ../libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -g -O0 -static -o libbruker.la FrmRoutines.lo FRM_LIB.lo -lm > ar cru .libs/libbruker.a FrmRoutines.o FRM_LIB.o > ranlib .libs/libbruker.a > creating libbruker.la > (cd .libs && rm -f libbruker.la && ln -s ../libbruker.la libbruker.la) > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Bruker' > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Nothing to be done for `install-exec-am'. > make[4]: Nothing to be done for `install-data-am'. > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Bruker' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Bruker' > Making install in MAR > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/MAR' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT mar300_header.lo -MD -MP -MF .deps/mar300_header.Tpo -c -o mar300_header.lo mar300_header.c > mkdir .libs > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT mar300_header.lo -MD -MP -MF .deps/mar300_header.Tpo -c mar300_header.c -fPIC -DPIC -o .libs/mar300_header.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT mar300_header.lo -MD -MP -MF .deps/mar300_header.Tpo -c mar300_header.c -fPIC -DPIC -o mar300_header.o >/dev/null 2>&1 > mv -f .deps/mar300_header.Tpo .deps/mar300_header.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT mar345_header.lo -MD -MP -MF .deps/mar345_header.Tpo -c -o mar345_header.lo mar345_header.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT mar345_header.lo -MD -MP -MF .deps/mar345_header.Tpo -c mar345_header.c -fPIC -DPIC -o .libs/mar345_header.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT mar345_header.lo -MD -MP -MF .deps/mar345_header.Tpo -c mar345_header.c -fPIC -DPIC -o mar345_header.o >/dev/null 2>&1 > mv -f .deps/mar345_header.Tpo .deps/mar345_header.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT marcif.lo -MD -MP -MF .deps/marcif.Tpo -c -o marcif.lo marcif.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT marcif.lo -MD -MP -MF .deps/marcif.Tpo -c marcif.c -fPIC -DPIC -o .libs/marcif.o > marcif.c: In function 'GetCIFData': > marcif.c:1926: warning: format '%11d' expects type 'int', but argument 2 has type 'size_t' > marcif.c:1929: warning: format '%11d' expects type 'int', but argument 2 has type 'size_t' > marcif.c:1932: warning: format '%11d' expects type 'int', but argument 2 has type 'size_t' > marcif.c: In function 'PutCIFData': > marcif.c:2007: warning: format '%11d' expects type 'int', but argument 2 has type 'size_t' > marcif.c:2008: warning: format '%11d' expects type 'int', but argument 2 has type 'size_t' > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT marcif.lo -MD -MP -MF .deps/marcif.Tpo -c marcif.c -fPIC -DPIC -o marcif.o >/dev/null 2>&1 > mv -f .deps/marcif.Tpo .deps/marcif.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT nb_header.lo -MD -MP -MF .deps/nb_header.Tpo -c -o nb_header.lo nb_header.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT nb_header.lo -MD -MP -MF .deps/nb_header.Tpo -c nb_header.c -fPIC -DPIC -o .libs/nb_header.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT nb_header.lo -MD -MP -MF .deps/nb_header.Tpo -c nb_header.c -fPIC -DPIC -o nb_header.o >/dev/null 2>&1 > mv -f .deps/nb_header.Tpo .deps/nb_header.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT swap.lo -MD -MP -MF .deps/swap.Tpo -c -o swap.lo swap.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT swap.lo -MD -MP -MF .deps/swap.Tpo -c swap.c -fPIC -DPIC -o .libs/swap.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT swap.lo -MD -MP -MF .deps/swap.Tpo -c swap.c -fPIC -DPIC -o swap.o >/dev/null 2>&1 > mv -f .deps/swap.Tpo .deps/swap.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT utils.lo -MD -MP -MF .deps/utils.Tpo -c -o utils.lo utils.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT utils.lo -MD -MP -MF .deps/utils.Tpo -c utils.c -fPIC -DPIC -o .libs/utils.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT utils.lo -MD -MP -MF .deps/utils.Tpo -c utils.c -fPIC -DPIC -o utils.o >/dev/null 2>&1 > mv -f .deps/utils.Tpo .deps/utils.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT pck.lo -MD -MP -MF .deps/pck.Tpo -c -o pck.lo pck.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT pck.lo -MD -MP -MF .deps/pck.Tpo -c pck.c -fPIC -DPIC -o .libs/pck.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I../CBFlib/src -I../CBFlib/include -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT pck.lo -MD -MP -MF .deps/pck.Tpo -c pck.c -fPIC -DPIC -o pck.o >/dev/null 2>&1 > mv -f .deps/pck.Tpo .deps/pck.Plo > /bin/sh ../libtool --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -g -O0 -static -o libmar.la mar300_header.lo mar345_header.lo marcif.lo nb_header.lo swap.lo utils.lo pck.lo -lm > ar cru .libs/libmar.a mar300_header.o mar345_header.o marcif.o nb_header.o swap.o utils.o pck.o > ranlib .libs/libmar.a > creating libmar.la > (cd .libs && rm -f libmar.la && ln -s ../libmar.la libmar.la) > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/MAR' > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Nothing to be done for `install-exec-am'. > make[4]: Nothing to be done for `install-data-am'. > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/MAR' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/MAR' > Making install in Rigaku > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Rigaku' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > /bin/sh ../libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT ReadRAXISImages.lo -MD -MP -MF .deps/ReadRAXISImages.Tpo -c -o ReadRAXISImages.lo ReadRAXISImages.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT ReadRAXISImages.lo -MD -MP -MF .deps/ReadRAXISImages.Tpo -c ReadRAXISImages.cpp -fPIC -DPIC -o .libs/ReadRAXISImages.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT ReadRAXISImages.lo -MD -MP -MF .deps/ReadRAXISImages.Tpo -c ReadRAXISImages.cpp -fPIC -DPIC -o ReadRAXISImages.o >/dev/null 2>&1 > mv -f .deps/ReadRAXISImages.Tpo .deps/ReadRAXISImages.Plo > /bin/sh ../libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -g -O0 -static -o librigaku.la ReadRAXISImages.lo -lm > ar cru .libs/librigaku.a ReadRAXISImages.o > ranlib .libs/librigaku.a > creating librigaku.la > (cd .libs && rm -f librigaku.la && ln -s ../librigaku.la librigaku.la) > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Rigaku' > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Nothing to be done for `install-exec-am'. > make[4]: Nothing to be done for `install-data-am'. > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Rigaku' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Rigaku' > Making install in jpg > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/jpg' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcapimin.lo -MD -MP -MF .deps/jcapimin.Tpo -c -o jcapimin.lo jcapimin.c > mkdir .libs > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcapimin.lo -MD -MP -MF .deps/jcapimin.Tpo -c jcapimin.c -fPIC -DPIC -o .libs/jcapimin.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcapimin.lo -MD -MP -MF .deps/jcapimin.Tpo -c jcapimin.c -fPIC -DPIC -o jcapimin.o >/dev/null 2>&1 > mv -f .deps/jcapimin.Tpo .deps/jcapimin.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcapistd.lo -MD -MP -MF .deps/jcapistd.Tpo -c -o jcapistd.lo jcapistd.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcapistd.lo -MD -MP -MF .deps/jcapistd.Tpo -c jcapistd.c -fPIC -DPIC -o .libs/jcapistd.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcapistd.lo -MD -MP -MF .deps/jcapistd.Tpo -c jcapistd.c -fPIC -DPIC -o jcapistd.o >/dev/null 2>&1 > mv -f .deps/jcapistd.Tpo .deps/jcapistd.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jccoefct.lo -MD -MP -MF .deps/jccoefct.Tpo -c -o jccoefct.lo jccoefct.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jccoefct.lo -MD -MP -MF .deps/jccoefct.Tpo -c jccoefct.c -fPIC -DPIC -o .libs/jccoefct.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jccoefct.lo -MD -MP -MF .deps/jccoefct.Tpo -c jccoefct.c -fPIC -DPIC -o jccoefct.o >/dev/null 2>&1 > mv -f .deps/jccoefct.Tpo .deps/jccoefct.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jccolor.lo -MD -MP -MF .deps/jccolor.Tpo -c -o jccolor.lo jccolor.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jccolor.lo -MD -MP -MF .deps/jccolor.Tpo -c jccolor.c -fPIC -DPIC -o .libs/jccolor.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jccolor.lo -MD -MP -MF .deps/jccolor.Tpo -c jccolor.c -fPIC -DPIC -o jccolor.o >/dev/null 2>&1 > mv -f .deps/jccolor.Tpo .deps/jccolor.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcdctmgr.lo -MD -MP -MF .deps/jcdctmgr.Tpo -c -o jcdctmgr.lo jcdctmgr.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcdctmgr.lo -MD -MP -MF .deps/jcdctmgr.Tpo -c jcdctmgr.c -fPIC -DPIC -o .libs/jcdctmgr.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcdctmgr.lo -MD -MP -MF .deps/jcdctmgr.Tpo -c jcdctmgr.c -fPIC -DPIC -o jcdctmgr.o >/dev/null 2>&1 > mv -f .deps/jcdctmgr.Tpo .deps/jcdctmgr.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jchuff.lo -MD -MP -MF .deps/jchuff.Tpo -c -o jchuff.lo jchuff.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jchuff.lo -MD -MP -MF .deps/jchuff.Tpo -c jchuff.c -fPIC -DPIC -o .libs/jchuff.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jchuff.lo -MD -MP -MF .deps/jchuff.Tpo -c jchuff.c -fPIC -DPIC -o jchuff.o >/dev/null 2>&1 > mv -f .deps/jchuff.Tpo .deps/jchuff.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcinit.lo -MD -MP -MF .deps/jcinit.Tpo -c -o jcinit.lo jcinit.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcinit.lo -MD -MP -MF .deps/jcinit.Tpo -c jcinit.c -fPIC -DPIC -o .libs/jcinit.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcinit.lo -MD -MP -MF .deps/jcinit.Tpo -c jcinit.c -fPIC -DPIC -o jcinit.o >/dev/null 2>&1 > mv -f .deps/jcinit.Tpo .deps/jcinit.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcmainct.lo -MD -MP -MF .deps/jcmainct.Tpo -c -o jcmainct.lo jcmainct.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcmainct.lo -MD -MP -MF .deps/jcmainct.Tpo -c jcmainct.c -fPIC -DPIC -o .libs/jcmainct.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcmainct.lo -MD -MP -MF .deps/jcmainct.Tpo -c jcmainct.c -fPIC -DPIC -o jcmainct.o >/dev/null 2>&1 > mv -f .deps/jcmainct.Tpo .deps/jcmainct.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcmarker.lo -MD -MP -MF .deps/jcmarker.Tpo -c -o jcmarker.lo jcmarker.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcmarker.lo -MD -MP -MF .deps/jcmarker.Tpo -c jcmarker.c -fPIC -DPIC -o .libs/jcmarker.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcmarker.lo -MD -MP -MF .deps/jcmarker.Tpo -c jcmarker.c -fPIC -DPIC -o jcmarker.o >/dev/null 2>&1 > mv -f .deps/jcmarker.Tpo .deps/jcmarker.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcmaster.lo -MD -MP -MF .deps/jcmaster.Tpo -c -o jcmaster.lo jcmaster.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcmaster.lo -MD -MP -MF .deps/jcmaster.Tpo -c jcmaster.c -fPIC -DPIC -o .libs/jcmaster.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcmaster.lo -MD -MP -MF .deps/jcmaster.Tpo -c jcmaster.c -fPIC -DPIC -o jcmaster.o >/dev/null 2>&1 > mv -f .deps/jcmaster.Tpo .deps/jcmaster.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcomapi.lo -MD -MP -MF .deps/jcomapi.Tpo -c -o jcomapi.lo jcomapi.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcomapi.lo -MD -MP -MF .deps/jcomapi.Tpo -c jcomapi.c -fPIC -DPIC -o .libs/jcomapi.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcomapi.lo -MD -MP -MF .deps/jcomapi.Tpo -c jcomapi.c -fPIC -DPIC -o jcomapi.o >/dev/null 2>&1 > mv -f .deps/jcomapi.Tpo .deps/jcomapi.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcparam.lo -MD -MP -MF .deps/jcparam.Tpo -c -o jcparam.lo jcparam.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcparam.lo -MD -MP -MF .deps/jcparam.Tpo -c jcparam.c -fPIC -DPIC -o .libs/jcparam.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcparam.lo -MD -MP -MF .deps/jcparam.Tpo -c jcparam.c -fPIC -DPIC -o jcparam.o >/dev/null 2>&1 > mv -f .deps/jcparam.Tpo .deps/jcparam.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcphuff.lo -MD -MP -MF .deps/jcphuff.Tpo -c -o jcphuff.lo jcphuff.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcphuff.lo -MD -MP -MF .deps/jcphuff.Tpo -c jcphuff.c -fPIC -DPIC -o .libs/jcphuff.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcphuff.lo -MD -MP -MF .deps/jcphuff.Tpo -c jcphuff.c -fPIC -DPIC -o jcphuff.o >/dev/null 2>&1 > mv -f .deps/jcphuff.Tpo .deps/jcphuff.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcprepct.lo -MD -MP -MF .deps/jcprepct.Tpo -c -o jcprepct.lo jcprepct.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcprepct.lo -MD -MP -MF .deps/jcprepct.Tpo -c jcprepct.c -fPIC -DPIC -o .libs/jcprepct.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcprepct.lo -MD -MP -MF .deps/jcprepct.Tpo -c jcprepct.c -fPIC -DPIC -o jcprepct.o >/dev/null 2>&1 > mv -f .deps/jcprepct.Tpo .deps/jcprepct.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcsample.lo -MD -MP -MF .deps/jcsample.Tpo -c -o jcsample.lo jcsample.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcsample.lo -MD -MP -MF .deps/jcsample.Tpo -c jcsample.c -fPIC -DPIC -o .libs/jcsample.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jcsample.lo -MD -MP -MF .deps/jcsample.Tpo -c jcsample.c -fPIC -DPIC -o jcsample.o >/dev/null 2>&1 > mv -f .deps/jcsample.Tpo .deps/jcsample.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jctrans.lo -MD -MP -MF .deps/jctrans.Tpo -c -o jctrans.lo jctrans.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jctrans.lo -MD -MP -MF .deps/jctrans.Tpo -c jctrans.c -fPIC -DPIC -o .libs/jctrans.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jctrans.lo -MD -MP -MF .deps/jctrans.Tpo -c jctrans.c -fPIC -DPIC -o jctrans.o >/dev/null 2>&1 > mv -f .deps/jctrans.Tpo .deps/jctrans.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdapimin.lo -MD -MP -MF .deps/jdapimin.Tpo -c -o jdapimin.lo jdapimin.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdapimin.lo -MD -MP -MF .deps/jdapimin.Tpo -c jdapimin.c -fPIC -DPIC -o .libs/jdapimin.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdapimin.lo -MD -MP -MF .deps/jdapimin.Tpo -c jdapimin.c -fPIC -DPIC -o jdapimin.o >/dev/null 2>&1 > mv -f .deps/jdapimin.Tpo .deps/jdapimin.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdapistd.lo -MD -MP -MF .deps/jdapistd.Tpo -c -o jdapistd.lo jdapistd.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdapistd.lo -MD -MP -MF .deps/jdapistd.Tpo -c jdapistd.c -fPIC -DPIC -o .libs/jdapistd.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdapistd.lo -MD -MP -MF .deps/jdapistd.Tpo -c jdapistd.c -fPIC -DPIC -o jdapistd.o >/dev/null 2>&1 > mv -f .deps/jdapistd.Tpo .deps/jdapistd.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdatadst.lo -MD -MP -MF .deps/jdatadst.Tpo -c -o jdatadst.lo jdatadst.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdatadst.lo -MD -MP -MF .deps/jdatadst.Tpo -c jdatadst.c -fPIC -DPIC -o .libs/jdatadst.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdatadst.lo -MD -MP -MF .deps/jdatadst.Tpo -c jdatadst.c -fPIC -DPIC -o jdatadst.o >/dev/null 2>&1 > mv -f .deps/jdatadst.Tpo .deps/jdatadst.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdatasrc.lo -MD -MP -MF .deps/jdatasrc.Tpo -c -o jdatasrc.lo jdatasrc.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdatasrc.lo -MD -MP -MF .deps/jdatasrc.Tpo -c jdatasrc.c -fPIC -DPIC -o .libs/jdatasrc.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdatasrc.lo -MD -MP -MF .deps/jdatasrc.Tpo -c jdatasrc.c -fPIC -DPIC -o jdatasrc.o >/dev/null 2>&1 > mv -f .deps/jdatasrc.Tpo .deps/jdatasrc.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdcoefct.lo -MD -MP -MF .deps/jdcoefct.Tpo -c -o jdcoefct.lo jdcoefct.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdcoefct.lo -MD -MP -MF .deps/jdcoefct.Tpo -c jdcoefct.c -fPIC -DPIC -o .libs/jdcoefct.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdcoefct.lo -MD -MP -MF .deps/jdcoefct.Tpo -c jdcoefct.c -fPIC -DPIC -o jdcoefct.o >/dev/null 2>&1 > mv -f .deps/jdcoefct.Tpo .deps/jdcoefct.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdcolor.lo -MD -MP -MF .deps/jdcolor.Tpo -c -o jdcolor.lo jdcolor.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdcolor.lo -MD -MP -MF .deps/jdcolor.Tpo -c jdcolor.c -fPIC -DPIC -o .libs/jdcolor.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdcolor.lo -MD -MP -MF .deps/jdcolor.Tpo -c jdcolor.c -fPIC -DPIC -o jdcolor.o >/dev/null 2>&1 > mv -f .deps/jdcolor.Tpo .deps/jdcolor.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jddctmgr.lo -MD -MP -MF .deps/jddctmgr.Tpo -c -o jddctmgr.lo jddctmgr.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jddctmgr.lo -MD -MP -MF .deps/jddctmgr.Tpo -c jddctmgr.c -fPIC -DPIC -o .libs/jddctmgr.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jddctmgr.lo -MD -MP -MF .deps/jddctmgr.Tpo -c jddctmgr.c -fPIC -DPIC -o jddctmgr.o >/dev/null 2>&1 > mv -f .deps/jddctmgr.Tpo .deps/jddctmgr.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdhuff.lo -MD -MP -MF .deps/jdhuff.Tpo -c -o jdhuff.lo jdhuff.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdhuff.lo -MD -MP -MF .deps/jdhuff.Tpo -c jdhuff.c -fPIC -DPIC -o .libs/jdhuff.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdhuff.lo -MD -MP -MF .deps/jdhuff.Tpo -c jdhuff.c -fPIC -DPIC -o jdhuff.o >/dev/null 2>&1 > mv -f .deps/jdhuff.Tpo .deps/jdhuff.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdinput.lo -MD -MP -MF .deps/jdinput.Tpo -c -o jdinput.lo jdinput.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdinput.lo -MD -MP -MF .deps/jdinput.Tpo -c jdinput.c -fPIC -DPIC -o .libs/jdinput.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdinput.lo -MD -MP -MF .deps/jdinput.Tpo -c jdinput.c -fPIC -DPIC -o jdinput.o >/dev/null 2>&1 > mv -f .deps/jdinput.Tpo .deps/jdinput.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmainct.lo -MD -MP -MF .deps/jdmainct.Tpo -c -o jdmainct.lo jdmainct.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmainct.lo -MD -MP -MF .deps/jdmainct.Tpo -c jdmainct.c -fPIC -DPIC -o .libs/jdmainct.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmainct.lo -MD -MP -MF .deps/jdmainct.Tpo -c jdmainct.c -fPIC -DPIC -o jdmainct.o >/dev/null 2>&1 > mv -f .deps/jdmainct.Tpo .deps/jdmainct.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmarker.lo -MD -MP -MF .deps/jdmarker.Tpo -c -o jdmarker.lo jdmarker.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmarker.lo -MD -MP -MF .deps/jdmarker.Tpo -c jdmarker.c -fPIC -DPIC -o .libs/jdmarker.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmarker.lo -MD -MP -MF .deps/jdmarker.Tpo -c jdmarker.c -fPIC -DPIC -o jdmarker.o >/dev/null 2>&1 > mv -f .deps/jdmarker.Tpo .deps/jdmarker.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmaster.lo -MD -MP -MF .deps/jdmaster.Tpo -c -o jdmaster.lo jdmaster.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmaster.lo -MD -MP -MF .deps/jdmaster.Tpo -c jdmaster.c -fPIC -DPIC -o .libs/jdmaster.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmaster.lo -MD -MP -MF .deps/jdmaster.Tpo -c jdmaster.c -fPIC -DPIC -o jdmaster.o >/dev/null 2>&1 > mv -f .deps/jdmaster.Tpo .deps/jdmaster.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmerge.lo -MD -MP -MF .deps/jdmerge.Tpo -c -o jdmerge.lo jdmerge.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmerge.lo -MD -MP -MF .deps/jdmerge.Tpo -c jdmerge.c -fPIC -DPIC -o .libs/jdmerge.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdmerge.lo -MD -MP -MF .deps/jdmerge.Tpo -c jdmerge.c -fPIC -DPIC -o jdmerge.o >/dev/null 2>&1 > mv -f .deps/jdmerge.Tpo .deps/jdmerge.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdphuff.lo -MD -MP -MF .deps/jdphuff.Tpo -c -o jdphuff.lo jdphuff.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdphuff.lo -MD -MP -MF .deps/jdphuff.Tpo -c jdphuff.c -fPIC -DPIC -o .libs/jdphuff.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdphuff.lo -MD -MP -MF .deps/jdphuff.Tpo -c jdphuff.c -fPIC -DPIC -o jdphuff.o >/dev/null 2>&1 > mv -f .deps/jdphuff.Tpo .deps/jdphuff.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdpostct.lo -MD -MP -MF .deps/jdpostct.Tpo -c -o jdpostct.lo jdpostct.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdpostct.lo -MD -MP -MF .deps/jdpostct.Tpo -c jdpostct.c -fPIC -DPIC -o .libs/jdpostct.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdpostct.lo -MD -MP -MF .deps/jdpostct.Tpo -c jdpostct.c -fPIC -DPIC -o jdpostct.o >/dev/null 2>&1 > mv -f .deps/jdpostct.Tpo .deps/jdpostct.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdsample.lo -MD -MP -MF .deps/jdsample.Tpo -c -o jdsample.lo jdsample.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdsample.lo -MD -MP -MF .deps/jdsample.Tpo -c jdsample.c -fPIC -DPIC -o .libs/jdsample.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdsample.lo -MD -MP -MF .deps/jdsample.Tpo -c jdsample.c -fPIC -DPIC -o jdsample.o >/dev/null 2>&1 > mv -f .deps/jdsample.Tpo .deps/jdsample.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdtrans.lo -MD -MP -MF .deps/jdtrans.Tpo -c -o jdtrans.lo jdtrans.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdtrans.lo -MD -MP -MF .deps/jdtrans.Tpo -c jdtrans.c -fPIC -DPIC -o .libs/jdtrans.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jdtrans.lo -MD -MP -MF .deps/jdtrans.Tpo -c jdtrans.c -fPIC -DPIC -o jdtrans.o >/dev/null 2>&1 > mv -f .deps/jdtrans.Tpo .deps/jdtrans.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jerror.lo -MD -MP -MF .deps/jerror.Tpo -c -o jerror.lo jerror.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jerror.lo -MD -MP -MF .deps/jerror.Tpo -c jerror.c -fPIC -DPIC -o .libs/jerror.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jerror.lo -MD -MP -MF .deps/jerror.Tpo -c jerror.c -fPIC -DPIC -o jerror.o >/dev/null 2>&1 > mv -f .deps/jerror.Tpo .deps/jerror.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jfdctflt.lo -MD -MP -MF .deps/jfdctflt.Tpo -c -o jfdctflt.lo jfdctflt.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jfdctflt.lo -MD -MP -MF .deps/jfdctflt.Tpo -c jfdctflt.c -fPIC -DPIC -o .libs/jfdctflt.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jfdctflt.lo -MD -MP -MF .deps/jfdctflt.Tpo -c jfdctflt.c -fPIC -DPIC -o jfdctflt.o >/dev/null 2>&1 > mv -f .deps/jfdctflt.Tpo .deps/jfdctflt.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jfdctfst.lo -MD -MP -MF .deps/jfdctfst.Tpo -c -o jfdctfst.lo jfdctfst.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jfdctfst.lo -MD -MP -MF .deps/jfdctfst.Tpo -c jfdctfst.c -fPIC -DPIC -o .libs/jfdctfst.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jfdctfst.lo -MD -MP -MF .deps/jfdctfst.Tpo -c jfdctfst.c -fPIC -DPIC -o jfdctfst.o >/dev/null 2>&1 > mv -f .deps/jfdctfst.Tpo .deps/jfdctfst.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jfdctint.lo -MD -MP -MF .deps/jfdctint.Tpo -c -o jfdctint.lo jfdctint.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jfdctint.lo -MD -MP -MF .deps/jfdctint.Tpo -c jfdctint.c -fPIC -DPIC -o .libs/jfdctint.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jfdctint.lo -MD -MP -MF .deps/jfdctint.Tpo -c jfdctint.c -fPIC -DPIC -o jfdctint.o >/dev/null 2>&1 > mv -f .deps/jfdctint.Tpo .deps/jfdctint.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctflt.lo -MD -MP -MF .deps/jidctflt.Tpo -c -o jidctflt.lo jidctflt.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctflt.lo -MD -MP -MF .deps/jidctflt.Tpo -c jidctflt.c -fPIC -DPIC -o .libs/jidctflt.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctflt.lo -MD -MP -MF .deps/jidctflt.Tpo -c jidctflt.c -fPIC -DPIC -o jidctflt.o >/dev/null 2>&1 > mv -f .deps/jidctflt.Tpo .deps/jidctflt.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctfst.lo -MD -MP -MF .deps/jidctfst.Tpo -c -o jidctfst.lo jidctfst.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctfst.lo -MD -MP -MF .deps/jidctfst.Tpo -c jidctfst.c -fPIC -DPIC -o .libs/jidctfst.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctfst.lo -MD -MP -MF .deps/jidctfst.Tpo -c jidctfst.c -fPIC -DPIC -o jidctfst.o >/dev/null 2>&1 > mv -f .deps/jidctfst.Tpo .deps/jidctfst.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctint.lo -MD -MP -MF .deps/jidctint.Tpo -c -o jidctint.lo jidctint.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctint.lo -MD -MP -MF .deps/jidctint.Tpo -c jidctint.c -fPIC -DPIC -o .libs/jidctint.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctint.lo -MD -MP -MF .deps/jidctint.Tpo -c jidctint.c -fPIC -DPIC -o jidctint.o >/dev/null 2>&1 > mv -f .deps/jidctint.Tpo .deps/jidctint.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctred.lo -MD -MP -MF .deps/jidctred.Tpo -c -o jidctred.lo jidctred.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctred.lo -MD -MP -MF .deps/jidctred.Tpo -c jidctred.c -fPIC -DPIC -o .libs/jidctred.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jidctred.lo -MD -MP -MF .deps/jidctred.Tpo -c jidctred.c -fPIC -DPIC -o jidctred.o >/dev/null 2>&1 > mv -f .deps/jidctred.Tpo .deps/jidctred.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jquant1.lo -MD -MP -MF .deps/jquant1.Tpo -c -o jquant1.lo jquant1.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jquant1.lo -MD -MP -MF .deps/jquant1.Tpo -c jquant1.c -fPIC -DPIC -o .libs/jquant1.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jquant1.lo -MD -MP -MF .deps/jquant1.Tpo -c jquant1.c -fPIC -DPIC -o jquant1.o >/dev/null 2>&1 > mv -f .deps/jquant1.Tpo .deps/jquant1.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jquant2.lo -MD -MP -MF .deps/jquant2.Tpo -c -o jquant2.lo jquant2.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jquant2.lo -MD -MP -MF .deps/jquant2.Tpo -c jquant2.c -fPIC -DPIC -o .libs/jquant2.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jquant2.lo -MD -MP -MF .deps/jquant2.Tpo -c jquant2.c -fPIC -DPIC -o jquant2.o >/dev/null 2>&1 > mv -f .deps/jquant2.Tpo .deps/jquant2.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jutils.lo -MD -MP -MF .deps/jutils.Tpo -c -o jutils.lo jutils.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jutils.lo -MD -MP -MF .deps/jutils.Tpo -c jutils.c -fPIC -DPIC -o .libs/jutils.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jutils.lo -MD -MP -MF .deps/jutils.Tpo -c jutils.c -fPIC -DPIC -o jutils.o >/dev/null 2>&1 > mv -f .deps/jutils.Tpo .deps/jutils.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jmemmgr.lo -MD -MP -MF .deps/jmemmgr.Tpo -c -o jmemmgr.lo jmemmgr.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jmemmgr.lo -MD -MP -MF .deps/jmemmgr.Tpo -c jmemmgr.c -fPIC -DPIC -o .libs/jmemmgr.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jmemmgr.lo -MD -MP -MF .deps/jmemmgr.Tpo -c jmemmgr.c -fPIC -DPIC -o jmemmgr.o >/dev/null 2>&1 > mv -f .deps/jmemmgr.Tpo .deps/jmemmgr.Plo > /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jmemnobs.lo -MD -MP -MF .deps/jmemnobs.Tpo -c -o jmemnobs.lo jmemnobs.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jmemnobs.lo -MD -MP -MF .deps/jmemnobs.Tpo -c jmemnobs.c -fPIC -DPIC -o .libs/jmemnobs.o > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT jmemnobs.lo -MD -MP -MF .deps/jmemnobs.Tpo -c jmemnobs.c -fPIC -DPIC -o jmemnobs.o >/dev/null 2>&1 > mv -f .deps/jmemnobs.Tpo .deps/jmemnobs.Plo > /bin/sh ../libtool --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -g -O0 -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -version-info 62:0 -o libjpeg.la jcapimin.lo jcapistd.lo jccoefct.lo jccolor.lo jcdctmgr.lo jchuff.lo jcinit.lo jcmainct.lo jcmarker.lo jcmaster.lo jcomapi.lo jcparam.lo jcphuff.lo jcprepct.lo jcsample.lo jctrans.lo jdapimin.lo jdapistd.lo jdatadst.lo jdatasrc.lo jdcoefct.lo jdcolor.lo jddctmgr.lo jdhuff.lo jdinput.lo jdmainct.lo jdmarker.lo jdmaster.lo jdmerge.lo jdphuff.lo jdpostct.lo jdsample.lo jdtrans.lo jerror.lo jfdctflt.lo jfdctfst.lo jfdctint.lo jidctflt.lo jidctfst.lo jidctint.lo jidctred.lo jquant1.lo jquant2.lo jutils.lo jmemmgr.lo jmemnobs.lo -lm > libtool: link: warning: `-version-info/-version-number' is ignored for convenience libraries > ar cru .libs/libjpeg.a .libs/jcapimin.o .libs/jcapistd.o .libs/jccoefct.o .libs/jccolor.o .libs/jcdctmgr.o .libs/jchuff.o .libs/jcinit.o .libs/jcmainct.o .libs/jcmarker.o .libs/jcmaster.o .libs/jcomapi.o .libs/jcparam.o .libs/jcphuff.o .libs/jcprepct.o .libs/jcsample.o .libs/jctrans.o .libs/jdapimin.o .libs/jdapistd.o .libs/jdatadst.o .libs/jdatasrc.o .libs/jdcoefct.o .libs/jdcolor.o .libs/jddctmgr.o .libs/jdhuff.o .libs/jdinput.o .libs/jdmainct.o .libs/jdmarker.o .libs/jdmaster.o .libs/jdmerge.o .libs/jdphuff.o .libs/jdpostct.o .libs/jdsample.o .libs/jdtrans.o .libs/jerror.o .libs/jfdctflt.o .libs/jfdctfst.o .libs/jfdctint.o .libs/jidctflt.o .libs/jidctfst.o .libs/jidctint.o .libs/jidctred.o .libs/jquant1.o .libs/jquant2.o .libs/jutils.o .libs/jmemmgr.o .libs/jmemnobs.o > ranlib .libs/libjpeg.a > creating libjpeg.la > (cd .libs && rm -f libjpeg.la && ln -s ../libjpeg.la libjpeg.la) > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/jpg' > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Nothing to be done for `install-exec-am'. > make[4]: Nothing to be done for `install-data-am'. > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/jpg' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/jpg' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageJpeg.lo -MD -MP -MF .deps/DiffractionImageJpeg.Tpo -c -o DiffractionImageJpeg.lo DiffractionImageJpeg.cpp > mkdir .libs > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageJpeg.lo -MD -MP -MF .deps/DiffractionImageJpeg.Tpo -c DiffractionImageJpeg.cpp -fPIC -DPIC -o .libs/DiffractionImageJpeg.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageJpeg.lo -MD -MP -MF .deps/DiffractionImageJpeg.Tpo -c DiffractionImageJpeg.cpp -fPIC -DPIC -o DiffractionImageJpeg.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageJpeg.Tpo .deps/DiffractionImageJpeg.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageADSC.lo -MD -MP -MF .deps/DiffractionImageADSC.Tpo -c -o DiffractionImageADSC.lo DiffractionImageADSC.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageADSC.lo -MD -MP -MF .deps/DiffractionImageADSC.Tpo -c DiffractionImageADSC.cpp -fPIC -DPIC -o .libs/DiffractionImageADSC.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageADSC.lo -MD -MP -MF .deps/DiffractionImageADSC.Tpo -c DiffractionImageADSC.cpp -fPIC -DPIC -o DiffractionImageADSC.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageADSC.Tpo .deps/DiffractionImageADSC.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageCBF.lo -MD -MP -MF .deps/DiffractionImageCBF.Tpo -c -o DiffractionImageCBF.lo DiffractionImageCBF.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageCBF.lo -MD -MP -MF .deps/DiffractionImageCBF.Tpo -c DiffractionImageCBF.cpp -fPIC -DPIC -o .libs/DiffractionImageCBF.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageCBF.lo -MD -MP -MF .deps/DiffractionImageCBF.Tpo -c DiffractionImageCBF.cpp -fPIC -DPIC -o DiffractionImageCBF.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageCBF.Tpo .deps/DiffractionImageCBF.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageMAR.lo -MD -MP -MF .deps/DiffractionImageMAR.Tpo -c -o DiffractionImageMAR.lo DiffractionImageMAR.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageMAR.lo -MD -MP -MF .deps/DiffractionImageMAR.Tpo -c DiffractionImageMAR.cpp -fPIC -DPIC -o .libs/DiffractionImageMAR.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageMAR.lo -MD -MP -MF .deps/DiffractionImageMAR.Tpo -c DiffractionImageMAR.cpp -fPIC -DPIC -o DiffractionImageMAR.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageMAR.Tpo .deps/DiffractionImageMAR.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageRAXIS.lo -MD -MP -MF .deps/DiffractionImageRAXIS.Tpo -c -o DiffractionImageRAXIS.lo DiffractionImageRAXIS.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageRAXIS.lo -MD -MP -MF .deps/DiffractionImageRAXIS.Tpo -c DiffractionImageRAXIS.cpp -fPIC -DPIC -o .libs/DiffractionImageRAXIS.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageRAXIS.lo -MD -MP -MF .deps/DiffractionImageRAXIS.Tpo -c DiffractionImageRAXIS.cpp -fPIC -DPIC -o DiffractionImageRAXIS.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageRAXIS.Tpo .deps/DiffractionImageRAXIS.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageRaxisDtrek.lo -MD -MP -MF .deps/DiffractionImageRaxisDtrek.Tpo -c -o DiffractionImageRaxisDtrek.lo DiffractionImageRaxisDtrek.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageRaxisDtrek.lo -MD -MP -MF .deps/DiffractionImageRaxisDtrek.Tpo -c DiffractionImageRaxisDtrek.cpp -fPIC -DPIC -o .libs/DiffractionImageRaxisDtrek.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageRaxisDtrek.lo -MD -MP -MF .deps/DiffractionImageRaxisDtrek.Tpo -c DiffractionImageRaxisDtrek.cpp -fPIC -DPIC -o DiffractionImageRaxisDtrek.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageRaxisDtrek.Tpo .deps/DiffractionImageRaxisDtrek.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageSaturn.lo -MD -MP -MF .deps/DiffractionImageSaturn.Tpo -c -o DiffractionImageSaturn.lo DiffractionImageSaturn.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageSaturn.lo -MD -MP -MF .deps/DiffractionImageSaturn.Tpo -c DiffractionImageSaturn.cpp -fPIC -DPIC -o .libs/DiffractionImageSaturn.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageSaturn.lo -MD -MP -MF .deps/DiffractionImageSaturn.Tpo -c DiffractionImageSaturn.cpp -fPIC -DPIC -o DiffractionImageSaturn.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageSaturn.Tpo .deps/DiffractionImageSaturn.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageBruker.lo -MD -MP -MF .deps/DiffractionImageBruker.Tpo -c -o DiffractionImageBruker.lo DiffractionImageBruker.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageBruker.lo -MD -MP -MF .deps/DiffractionImageBruker.Tpo -c DiffractionImageBruker.cpp -fPIC -DPIC -o .libs/DiffractionImageBruker.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageBruker.lo -MD -MP -MF .deps/DiffractionImageBruker.Tpo -c DiffractionImageBruker.cpp -fPIC -DPIC -o DiffractionImageBruker.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageBruker.Tpo .deps/DiffractionImageBruker.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageOxford.lo -MD -MP -MF .deps/DiffractionImageOxford.Tpo -c -o DiffractionImageOxford.lo DiffractionImageOxford.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageOxford.lo -MD -MP -MF .deps/DiffractionImageOxford.Tpo -c DiffractionImageOxford.cpp -fPIC -DPIC -o .libs/DiffractionImageOxford.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageOxford.lo -MD -MP -MF .deps/DiffractionImageOxford.Tpo -c DiffractionImageOxford.cpp -fPIC -DPIC -o DiffractionImageOxford.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageOxford.Tpo .deps/DiffractionImageOxford.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageTiff.lo -MD -MP -MF .deps/DiffractionImageTiff.Tpo -c -o DiffractionImageTiff.lo DiffractionImageTiff.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageTiff.lo -MD -MP -MF .deps/DiffractionImageTiff.Tpo -c DiffractionImageTiff.cpp -fPIC -DPIC -o .libs/DiffractionImageTiff.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageTiff.lo -MD -MP -MF .deps/DiffractionImageTiff.Tpo -c DiffractionImageTiff.cpp -fPIC -DPIC -o DiffractionImageTiff.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageTiff.Tpo .deps/DiffractionImageTiff.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImage.lo -MD -MP -MF .deps/DiffractionImage.Tpo -c -o DiffractionImage.lo DiffractionImage.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImage.lo -MD -MP -MF .deps/DiffractionImage.Tpo -c DiffractionImage.cpp -fPIC -DPIC -o .libs/DiffractionImage.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImage.lo -MD -MP -MF .deps/DiffractionImage.Tpo -c DiffractionImage.cpp -fPIC -DPIC -o DiffractionImage.o >/dev/null 2>&1 > mv -f .deps/DiffractionImage.Tpo .deps/DiffractionImage.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageRaw.lo -MD -MP -MF .deps/DiffractionImageRaw.Tpo -c -o DiffractionImageRaw.lo DiffractionImageRaw.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageRaw.lo -MD -MP -MF .deps/DiffractionImageRaw.Tpo -c DiffractionImageRaw.cpp -fPIC -DPIC -o .libs/DiffractionImageRaw.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageRaw.lo -MD -MP -MF .deps/DiffractionImageRaw.Tpo -c DiffractionImageRaw.cpp -fPIC -DPIC -o DiffractionImageRaw.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageRaw.Tpo .deps/DiffractionImageRaw.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageUtility.lo -MD -MP -MF .deps/DiffractionImageUtility.Tpo -c -o DiffractionImageUtility.lo DiffractionImageUtility.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageUtility.lo -MD -MP -MF .deps/DiffractionImageUtility.Tpo -c DiffractionImageUtility.cpp -fPIC -DPIC -o .libs/DiffractionImageUtility.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageUtility.lo -MD -MP -MF .deps/DiffractionImageUtility.Tpo -c DiffractionImageUtility.cpp -fPIC -DPIC -o DiffractionImageUtility.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageUtility.Tpo .deps/DiffractionImageUtility.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageCalculations.lo -MD -MP -MF .deps/DiffractionImageCalculations.Tpo -c -o DiffractionImageCalculations.lo DiffractionImageCalculations.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageCalculations.lo -MD -MP -MF .deps/DiffractionImageCalculations.Tpo -c DiffractionImageCalculations.cpp -fPIC -DPIC -o .libs/DiffractionImageCalculations.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageCalculations.lo -MD -MP -MF .deps/DiffractionImageCalculations.Tpo -c DiffractionImageCalculations.cpp -fPIC -DPIC -o DiffractionImageCalculations.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageCalculations.Tpo .deps/DiffractionImageCalculations.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageImgOperations.lo -MD -MP -MF .deps/DiffractionImageImgOperations.Tpo -c -o DiffractionImageImgOperations.lo DiffractionImageImgOperations.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageImgOperations.lo -MD -MP -MF .deps/DiffractionImageImgOperations.Tpo -c DiffractionImageImgOperations.cpp -fPIC -DPIC -o .libs/DiffractionImageImgOperations.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageImgOperations.lo -MD -MP -MF .deps/DiffractionImageImgOperations.Tpo -c DiffractionImageImgOperations.cpp -fPIC -DPIC -o DiffractionImageImgOperations.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageImgOperations.Tpo .deps/DiffractionImageImgOperations.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageException.lo -MD -MP -MF .deps/DiffractionImageException.Tpo -c -o DiffractionImageException.lo DiffractionImageException.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageException.lo -MD -MP -MF .deps/DiffractionImageException.Tpo -c DiffractionImageException.cpp -fPIC -DPIC -o .libs/DiffractionImageException.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageException.lo -MD -MP -MF .deps/DiffractionImageException.Tpo -c DiffractionImageException.cpp -fPIC -DPIC -o DiffractionImageException.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageException.Tpo .deps/DiffractionImageException.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageCompare.lo -MD -MP -MF .deps/DiffractionImageCompare.Tpo -c -o DiffractionImageCompare.lo DiffractionImageCompare.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageCompare.lo -MD -MP -MF .deps/DiffractionImageCompare.Tpo -c DiffractionImageCompare.cpp -fPIC -DPIC -o .libs/DiffractionImageCompare.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageCompare.lo -MD -MP -MF .deps/DiffractionImageCompare.Tpo -c DiffractionImageCompare.cpp -fPIC -DPIC -o DiffractionImageCompare.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageCompare.Tpo .deps/DiffractionImageCompare.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageAutomask.lo -MD -MP -MF .deps/DiffractionImageAutomask.Tpo -c -o DiffractionImageAutomask.lo DiffractionImageAutomask.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageAutomask.lo -MD -MP -MF .deps/DiffractionImageAutomask.Tpo -c DiffractionImageAutomask.cpp -fPIC -DPIC -o .libs/DiffractionImageAutomask.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageAutomask.lo -MD -MP -MF .deps/DiffractionImageAutomask.Tpo -c DiffractionImageAutomask.cpp -fPIC -DPIC -o DiffractionImageAutomask.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageAutomask.Tpo .deps/DiffractionImageAutomask.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT Profile.lo -MD -MP -MF .deps/Profile.Tpo -c -o Profile.lo Profile.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT Profile.lo -MD -MP -MF .deps/Profile.Tpo -c Profile.cpp -fPIC -DPIC -o .libs/Profile.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT Profile.lo -MD -MP -MF .deps/Profile.Tpo -c Profile.cpp -fPIC -DPIC -o Profile.o >/dev/null 2>&1 > mv -f .deps/Profile.Tpo .deps/Profile.Plo > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT Peak.lo -MD -MP -MF .deps/Peak.Tpo -c -o Peak.lo Peak.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT Peak.lo -MD -MP -MF .deps/Peak.Tpo -c Peak.cpp -fPIC -DPIC -o .libs/Peak.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT Peak.lo -MD -MP -MF .deps/Peak.Tpo -c Peak.cpp -fPIC -DPIC -o Peak.o >/dev/null 2>&1 > mv -f .deps/Peak.Tpo .deps/Peak.Plo > /bin/sh ./libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT dps_peaksearch_cn.lo -MD -MP -MF .deps/dps_peaksearch_cn.Tpo -c -o dps_peaksearch_cn.lo dps_peaksearch_cn.c > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT dps_peaksearch_cn.lo -MD -MP -MF .deps/dps_peaksearch_cn.Tpo -c dps_peaksearch_cn.c -fPIC -DPIC -o .libs/dps_peaksearch_cn.o > dps_peaksearch_cn.c: In function 'dps_peaksearch_cn': > dps_peaksearch_cn.c:403: warning: passing argument 4 of 'qsort' from incompatible pointer type > x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT dps_peaksearch_cn.lo -MD -MP -MF .deps/dps_peaksearch_cn.Tpo -c dps_peaksearch_cn.c -fPIC -DPIC -o dps_peaksearch_cn.o >/dev/null 2>&1 > mv -f .deps/dps_peaksearch_cn.Tpo .deps/dps_peaksearch_cn.Plo > /bin/sh ./libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -g -O0 -static -o libDiffImage.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib DiffractionImageJpeg.lo DiffractionImageADSC.lo DiffractionImageCBF.lo DiffractionImageMAR.lo DiffractionImageRAXIS.lo DiffractionImageRaxisDtrek.lo DiffractionImageSaturn.lo DiffractionImageBruker.lo DiffractionImageOxford.lo DiffractionImageTiff.lo DiffractionImage.lo DiffractionImageRaw.lo DiffractionImageUtility.lo DiffractionImageCalculations.lo DiffractionImageImgOperations.lo DiffractionImageException.lo DiffractionImageCompare.lo DiffractionImageAutomask.lo Profile.lo Peak.lo dps_peaksearch_cn.lo -lm > ar cru .libs/libDiffImage.a DiffractionImageJpeg.o DiffractionImageADSC.o DiffractionImageCBF.o DiffractionImageMAR.o DiffractionImageRAXIS.o DiffractionImageRaxisDtrek.o DiffractionImageSaturn.o DiffractionImageBruker.o DiffractionImageOxford.o DiffractionImageTiff.o DiffractionImage.o DiffractionImageRaw.o DiffractionImageUtility.o DiffractionImageCalculations.o DiffractionImageImgOperations.o DiffractionImageException.o DiffractionImageCompare.o DiffractionImageAutomask.o Profile.o Peak.o dps_peaksearch_cn.o > ranlib .libs/libDiffImage.a > creating libDiffImage.la > (cd .libs && rm -f libDiffImage.la && ln -s ../libDiffImage.la libDiffImage.la) > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImagePythonInterface.lo -MD -MP -MF .deps/DiffractionImagePythonInterface.Tpo -c -o DiffractionImagePythonInterface.lo DiffractionImagePythonInterface.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImagePythonInterface.lo -MD -MP -MF .deps/DiffractionImagePythonInterface.Tpo -c DiffractionImagePythonInterface.cpp -fPIC -DPIC -o .libs/DiffractionImagePythonInterface.o > DiffractionImagePythonInterface.cpp: In function 'void SWIG_Python_AddErrorMsg(const char*)': > DiffractionImagePythonInterface.cpp:870: warning: format not a string literal and no format arguments > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImagePythonInterface.lo -MD -MP -MF .deps/DiffractionImagePythonInterface.Tpo -c DiffractionImagePythonInterface.cpp -fPIC -DPIC -o DiffractionImagePythonInterface.o >/dev/null 2>&1 > mv -f .deps/DiffractionImagePythonInterface.Tpo .deps/DiffractionImagePythonInterface.Plo > /bin/sh ./libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -g -O0 -shared --whole-archive libDiffImage.la ./CBFlib/src/libcbf.la ./Bruker/libbruker.la ./MAR/libmar.la ./Rigaku/librigaku.la ./jpg/libjpeg.la --no-whole-archive -rpath '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib' -o lib_DiffractionImage.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib DiffractionImagePythonInterface.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/DiffractionImagePythonInterface.o -Wl,--whole-archive ./CBFlib/src/.libs/libcbf.a ./Bruker/.libs/libbruker.a ./MAR/.libs/libmar.a ./Rigaku/.libs/librigaku.a ./jpg/.libs/libjpeg.a -Wl,--no-whole-archive ./.libs/libDiffImage.a -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -Wl,-soname -Wl,lib_DiffractionImage.so.0 -o .libs/lib_DiffractionImage.so.0.0.0 > (cd .libs && rm -f lib_DiffractionImage.so.0 && ln -s lib_DiffractionImage.so.0.0.0 lib_DiffractionImage.so.0) > (cd .libs && rm -f lib_DiffractionImage.so && ln -s lib_DiffractionImage.so.0.0.0 lib_DiffractionImage.so) > rm -fr .libs/lib_DiffractionImage.lax > mkdir .libs/lib_DiffractionImage.lax > rm -fr .libs/lib_DiffractionImage.lax/libcbf.a > mkdir .libs/lib_DiffractionImage.lax/libcbf.a > (cd .libs/lib_DiffractionImage.lax/libcbf.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./CBFlib/src/.libs/libcbf.a) > rm -fr .libs/lib_DiffractionImage.lax/libbruker.a > mkdir .libs/lib_DiffractionImage.lax/libbruker.a > (cd .libs/lib_DiffractionImage.lax/libbruker.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./Bruker/.libs/libbruker.a) > rm -fr .libs/lib_DiffractionImage.lax/libmar.a > mkdir .libs/lib_DiffractionImage.lax/libmar.a > (cd .libs/lib_DiffractionImage.lax/libmar.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./MAR/.libs/libmar.a) > rm -fr .libs/lib_DiffractionImage.lax/librigaku.a > mkdir .libs/lib_DiffractionImage.lax/librigaku.a > (cd .libs/lib_DiffractionImage.lax/librigaku.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./Rigaku/.libs/librigaku.a) > rm -fr .libs/lib_DiffractionImage.lax/libjpeg.a > mkdir .libs/lib_DiffractionImage.lax/libjpeg.a > (cd .libs/lib_DiffractionImage.lax/libjpeg.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./jpg/.libs/libjpeg.a) > ar cru .libs/lib_DiffractionImage.a DiffractionImagePythonInterface.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_alloc.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_ascii.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_binary.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_byte_offset.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_canonical.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_codes.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_compress.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_context.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_file.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_lex.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_packed.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_predictor.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_read_binary.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_read_mime.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_simple.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_string.o .libs/l! ib_DiffractionImage.lax/libcbf.a/cbf_stx.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_tree.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_uncompressed.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_write.o .libs/lib_DiffractionImage.lax/libcbf.a/cbf_write_binary.o .libs/lib_DiffractionImage.lax/libcbf.a/md5c.o .libs/lib_DiffractionImage.lax/libbruker.a/FrmRoutines.o .libs/lib_DiffractionImage.lax/libbruker.a/FRM_LIB.o .libs/lib_DiffractionImage.lax/libmar.a/mar300_header.o .libs/lib_DiffractionImage.lax/libmar.a/mar345_header.o .libs/lib_DiffractionImage.lax/libmar.a/marcif.o .libs/lib_DiffractionImage.lax/libmar.a/nb_header.o .libs/lib_DiffractionImage.lax/libmar.a/swap.o .libs/lib_DiffractionImage.lax/libmar.a/utils.o .libs/lib_DiffractionImage.lax/libmar.a/pck.o .libs/lib_DiffractionImage.lax/librigaku.a/ReadRAXISImages.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcapimin.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcapistd.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcc! oefct.o .libs/lib_DiffractionImage.lax/libjpeg.a/jccolor.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcdctmgr.o .libs/lib_DiffractionImage.lax/libjpeg.a/jchuff.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcinit.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcmainct.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcmarker.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcmaster.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcomapi.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcparam.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcphuff.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcprepct.o .libs/lib_DiffractionImage.lax/libjpeg.a/jcsample.o .libs/lib_DiffractionImage.lax/libjpeg.a/jctrans.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdapimin.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdapistd.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdatadst.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdatasrc.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdcoefct.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdcolor.o .libs/lib_DiffractionImage.lax/libjpeg.a/jddctmgr.o .libs/lib_Diffraction! Image.lax/libjpeg.a/jdhuff.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdinput.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdmainct.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdmarker.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdmaster.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdmerge.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdphuff.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdpostct.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdsample.o .libs/lib_DiffractionImage.lax/libjpeg.a/jdtrans.o .libs/lib_DiffractionImage.lax/libjpeg.a/jerror.o .libs/lib_DiffractionImage.lax/libjpeg.a/jfdctflt.o .libs/lib_DiffractionImage.lax/libjpeg.a/jfdctfst.o .libs/lib_DiffractionImage.lax/libjpeg.a/jfdctint.o .libs/lib_DiffractionImage.lax/libjpeg.a/jidctflt.o .libs/lib_DiffractionImage.lax/libjpeg.a/jidctfst.o .libs/lib_DiffractionImage.lax/libjpeg.a/jidctint.o .libs/lib_DiffractionImage.lax/libjpeg.a/jidctred.o .libs/lib_DiffractionImage.lax/libjpeg.a/jquant1.o .libs/lib_DiffractionImage.lax! /libjpeg.a/jquant2.o .libs/lib_DiffractionImage.lax/libjpeg.a/jutils.o .libs/lib_DiffractionImage.lax/libjpeg.a/jmemmgr.o .libs/lib_DiffractionImage.lax/libjpeg.a/jmemnobs.o > ranlib .libs/lib_DiffractionImage.a > rm -fr .libs/lib_DiffractionImage.lax > creating lib_DiffractionImage.la > (cd .libs && rm -f lib_DiffractionImage.la && ln -s ../lib_DiffractionImage.la lib_DiffractionImage.la) > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageTclInterface.lo -MD -MP -MF .deps/DiffractionImageTclInterface.Tpo -c -o DiffractionImageTclInterface.lo DiffractionImageTclInterface.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageTclInterface.lo -MD -MP -MF .deps/DiffractionImageTclInterface.Tpo -c DiffractionImageTclInterface.cpp -fPIC -DPIC -o .libs/DiffractionImageTclInterface.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageTclInterface.lo -MD -MP -MF .deps/DiffractionImageTclInterface.Tpo -c DiffractionImageTclInterface.cpp -fPIC -DPIC -o DiffractionImageTclInterface.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageTclInterface.Tpo .deps/DiffractionImageTclInterface.Plo > /bin/sh ./libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -g -O0 -shared --whole-archive libDiffImage.la ./CBFlib/src/libcbf.la ./Bruker/libbruker.la ./MAR/libmar.la ./Rigaku/librigaku.la ./jpg/libjpeg.la --no-whole-archive -rpath '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib' -o libDiffractionImage.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib DiffractionImageTclInterface.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/DiffractionImageTclInterface.o -Wl,--whole-archive ./CBFlib/src/.libs/libcbf.a ./Bruker/.libs/libbruker.a ./MAR/.libs/libmar.a ./Rigaku/.libs/librigaku.a ./jpg/.libs/libjpeg.a -Wl,--no-whole-archive ./.libs/libDiffImage.a -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -Wl,-soname -Wl,libDiffractionImage.so.0 -o .libs/libDiffractionImage.so.0.0.0 > (cd .libs && rm -f libDiffractionImage.so.0 && ln -s libDiffractionImage.so.0.0.0 libDiffractionImage.so.0) > (cd .libs && rm -f libDiffractionImage.so && ln -s libDiffractionImage.so.0.0.0 libDiffractionImage.so) > rm -fr .libs/libDiffractionImage.lax > mkdir .libs/libDiffractionImage.lax > rm -fr .libs/libDiffractionImage.lax/libcbf.a > mkdir .libs/libDiffractionImage.lax/libcbf.a > (cd .libs/libDiffractionImage.lax/libcbf.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./CBFlib/src/.libs/libcbf.a) > rm -fr .libs/libDiffractionImage.lax/libbruker.a > mkdir .libs/libDiffractionImage.lax/libbruker.a > (cd .libs/libDiffractionImage.lax/libbruker.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./Bruker/.libs/libbruker.a) > rm -fr .libs/libDiffractionImage.lax/libmar.a > mkdir .libs/libDiffractionImage.lax/libmar.a > (cd .libs/libDiffractionImage.lax/libmar.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./MAR/.libs/libmar.a) > rm -fr .libs/libDiffractionImage.lax/librigaku.a > mkdir .libs/libDiffractionImage.lax/librigaku.a > (cd .libs/libDiffractionImage.lax/librigaku.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./Rigaku/.libs/librigaku.a) > rm -fr .libs/libDiffractionImage.lax/libjpeg.a > mkdir .libs/libDiffractionImage.lax/libjpeg.a > (cd .libs/libDiffractionImage.lax/libjpeg.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./jpg/.libs/libjpeg.a) > ar cru .libs/libDiffractionImage.a DiffractionImageTclInterface.o .libs/libDiffractionImage.lax/libcbf.a/cbf.o .libs/libDiffractionImage.lax/libcbf.a/cbf_alloc.o .libs/libDiffractionImage.lax/libcbf.a/cbf_ascii.o .libs/libDiffractionImage.lax/libcbf.a/cbf_binary.o .libs/libDiffractionImage.lax/libcbf.a/cbf_byte_offset.o .libs/libDiffractionImage.lax/libcbf.a/cbf_canonical.o .libs/libDiffractionImage.lax/libcbf.a/cbf_codes.o .libs/libDiffractionImage.lax/libcbf.a/cbf_compress.o .libs/libDiffractionImage.lax/libcbf.a/cbf_context.o .libs/libDiffractionImage.lax/libcbf.a/cbf_file.o .libs/libDiffractionImage.lax/libcbf.a/cbf_lex.o .libs/libDiffractionImage.lax/libcbf.a/cbf_packed.o .libs/libDiffractionImage.lax/libcbf.a/cbf_predictor.o .libs/libDiffractionImage.lax/libcbf.a/cbf_read_binary.o .libs/libDiffractionImage.lax/libcbf.a/cbf_read_mime.o .libs/libDiffractionImage.lax/libcbf.a/cbf_simple.o .libs/libDiffractionImage.lax/libcbf.a/cbf_string.o .libs/libDiffractionImage.la! x/libcbf.a/cbf_stx.o .libs/libDiffractionImage.lax/libcbf.a/cbf_tree.o .libs/libDiffractionImage.lax/libcbf.a/cbf_uncompressed.o .libs/libDiffractionImage.lax/libcbf.a/cbf_write.o .libs/libDiffractionImage.lax/libcbf.a/cbf_write_binary.o .libs/libDiffractionImage.lax/libcbf.a/md5c.o .libs/libDiffractionImage.lax/libbruker.a/FrmRoutines.o .libs/libDiffractionImage.lax/libbruker.a/FRM_LIB.o .libs/libDiffractionImage.lax/libmar.a/mar300_header.o .libs/libDiffractionImage.lax/libmar.a/mar345_header.o .libs/libDiffractionImage.lax/libmar.a/marcif.o .libs/libDiffractionImage.lax/libmar.a/nb_header.o .libs/libDiffractionImage.lax/libmar.a/swap.o .libs/libDiffractionImage.lax/libmar.a/utils.o .libs/libDiffractionImage.lax/libmar.a/pck.o .libs/libDiffractionImage.lax/librigaku.a/ReadRAXISImages.o .libs/libDiffractionImage.lax/libjpeg.a/jcapimin.o .libs/libDiffractionImage.lax/libjpeg.a/jcapistd.o .libs/libDiffractionImage.lax/libjpeg.a/jccoefct.o .libs/libDiffractionImage.lax/li! bjpeg.a/jccolor.o .libs/libDiffractionImage.lax/libjpeg.a/jcdctmgr.o .libs/libDiffractionImage.lax/libjpeg.a/jchuff.o .libs/libDiffractionImage.lax/libjpeg.a/jcinit.o .libs/libDiffractionImage.lax/libjpeg.a/jcmainct.o .libs/libDiffractionImage.lax/libjpeg.a/jcmarker.o .libs/libDiffractionImage.lax/libjpeg.a/jcmaster.o .libs/libDiffractionImage.lax/libjpeg.a/jcomapi.o .libs/libDiffractionImage.lax/libjpeg.a/jcparam.o .libs/libDiffractionImage.lax/libjpeg.a/jcphuff.o .libs/libDiffractionImage.lax/libjpeg.a/jcprepct.o .libs/libDiffractionImage.lax/libjpeg.a/jcsample.o .libs/libDiffractionImage.lax/libjpeg.a/jctrans.o .libs/libDiffractionImage.lax/libjpeg.a/jdapimin.o .libs/libDiffractionImage.lax/libjpeg.a/jdapistd.o .libs/libDiffractionImage.lax/libjpeg.a/jdatadst.o .libs/libDiffractionImage.lax/libjpeg.a/jdatasrc.o .libs/libDiffractionImage.lax/libjpeg.a/jdcoefct.o .libs/libDiffractionImage.lax/libjpeg.a/jdcolor.o .libs/libDiffractionImage.lax/libjpeg.a/jddctmgr.o .libs/libDiffractionImage.lax/libjpeg.a/jdhuff.o .libs/libDiffractionImage.lax/li! bjpeg.a/jdinput.o .libs/libDiffractionImage.lax/libjpeg.a/jdmainct.o .libs/libDiffractionImage.lax/libjpeg.a/jdmarker.o .libs/libDiffractionImage.lax/libjpeg.a/jdmaster.o .libs/libDiffractionImage.lax/libjpeg.a/jdmerge.o .libs/libDiffractionImage.lax/libjpeg.a/jdphuff.o .libs/libDiffractionImage.lax/libjpeg.a/jdpostct.o .libs/libDiffractionImage.lax/libjpeg.a/jdsample.o .libs/libDiffractionImage.lax/libjpeg.a/jdtrans.o .libs/libDiffractionImage.lax/libjpeg.a/jerror.o .libs/libDiffractionImage.lax/libjpeg.a/jfdctflt.o .libs/libDiffractionImage.lax/libjpeg.a/jfdctfst.o .libs/libDiffractionImage.lax/libjpeg.a/jfdctint.o .libs/libDiffractionImage.lax/libjpeg.a/jidctflt.o .libs/libDiffractionImage.lax/libjpeg.a/jidctfst.o .libs/libDiffractionImage.lax/libjpeg.a/jidctint.o .libs/libDiffractionImage.lax/libjpeg.a/jidctred.o .libs/libDiffractionImage.lax/libjpeg.a/jquant1.o .libs/libDiffractionImage.lax/libjpeg.a/jquant2.o .libs/libDiffractionImage.lax/libjpeg.a/jutils.o .libs/libD! iffractionImage.lax/libjpeg.a/jmemmgr.o .libs/libDiffractionImage.lax/libjpeg.a/jmemnobs.o > ranlib .libs/libDiffractionImage.a > rm -fr .libs/libDiffractionImage.lax > creating libDiffractionImage.la > (cd .libs && rm -f libDiffractionImage.la && ln -s ../libDiffractionImage.la libDiffractionImage.la) > /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageJavaInterface.lo -MD -MP -MF .deps/DiffractionImageJavaInterface.Tpo -c -o DiffractionImageJavaInterface.lo DiffractionImageJavaInterface.cpp > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageJavaInterface.lo -MD -MP -MF .deps/DiffractionImageJavaInterface.Tpo -c DiffractionImageJavaInterface.cpp -fPIC -DPIC -o .libs/DiffractionImageJavaInterface.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" "-DPACKAGE_STRING=\"DiffractionImage 6.1.1\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT DiffractionImageJavaInterface.lo -MD -MP -MF .deps/DiffractionImageJavaInterface.Tpo -c DiffractionImageJavaInterface.cpp -fPIC -DPIC -o DiffractionImageJavaInterface.o >/dev/null 2>&1 > mv -f .deps/DiffractionImageJavaInterface.Tpo .deps/DiffractionImageJavaInterface.Plo > /bin/sh ./libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -g -O0 -shared --whole-archive libDiffImage.la ./CBFlib/src/libcbf.la ./Bruker/libbruker.la ./MAR/libmar.la ./Rigaku/librigaku.la ./jpg/libjpeg.la --no-whole-archive -rpath '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib' -o libDiffractionImaJ.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib DiffractionImageJavaInterface.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/DiffractionImageJavaInterface.o -Wl,--whole-archive ./CBFlib/src/.libs/libcbf.a ./Bruker/.libs/libbruker.a ./MAR/.libs/libmar.a ./Rigaku/.libs/librigaku.a ./jpg/.libs/libjpeg.a -Wl,--no-whole-archive ./.libs/libDiffImage.a -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -Wl,-soname -Wl,libDiffractionImaJ.so.0 -o .libs/libDiffractionImaJ.so.0.0.0 > (cd .libs && rm -f libDiffractionImaJ.so.0 && ln -s libDiffractionImaJ.so.0.0.0 libDiffractionImaJ.so.0) > (cd .libs && rm -f libDiffractionImaJ.so && ln -s libDiffractionImaJ.so.0.0.0 libDiffractionImaJ.so) > rm -fr .libs/libDiffractionImaJ.lax > mkdir .libs/libDiffractionImaJ.lax > rm -fr .libs/libDiffractionImaJ.lax/libcbf.a > mkdir .libs/libDiffractionImaJ.lax/libcbf.a > (cd .libs/libDiffractionImaJ.lax/libcbf.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./CBFlib/src/.libs/libcbf.a) > rm -fr .libs/libDiffractionImaJ.lax/libbruker.a > mkdir .libs/libDiffractionImaJ.lax/libbruker.a > (cd .libs/libDiffractionImaJ.lax/libbruker.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./Bruker/.libs/libbruker.a) > rm -fr .libs/libDiffractionImaJ.lax/libmar.a > mkdir .libs/libDiffractionImaJ.lax/libmar.a > (cd .libs/libDiffractionImaJ.lax/libmar.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./MAR/.libs/libmar.a) > rm -fr .libs/libDiffractionImaJ.lax/librigaku.a > mkdir .libs/libDiffractionImaJ.lax/librigaku.a > (cd .libs/libDiffractionImaJ.lax/librigaku.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./Rigaku/.libs/librigaku.a) > rm -fr .libs/libDiffractionImaJ.lax/libjpeg.a > mkdir .libs/libDiffractionImaJ.lax/libjpeg.a > (cd .libs/libDiffractionImaJ.lax/libjpeg.a && ar x /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/./jpg/.libs/libjpeg.a) > ar cru .libs/libDiffractionImaJ.a DiffractionImageJavaInterface.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_alloc.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_ascii.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_binary.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_byte_offset.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_canonical.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_codes.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_compress.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_context.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_file.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_lex.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_packed.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_predictor.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_read_binary.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_read_mime.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_simple.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_string.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_stx! .o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_tree.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_uncompressed.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_write.o .libs/libDiffractionImaJ.lax/libcbf.a/cbf_write_binary.o .libs/libDiffractionImaJ.lax/libcbf.a/md5c.o .libs/libDiffractionImaJ.lax/libbruker.a/FrmRoutines.o .libs/libDiffractionImaJ.lax/libbruker.a/FRM_LIB.o .libs/libDiffractionImaJ.lax/libmar.a/mar300_header.o .libs/libDiffractionImaJ.lax/libmar.a/mar345_header.o .libs/libDiffractionImaJ.lax/libmar.a/marcif.o .libs/libDiffractionImaJ.lax/libmar.a/nb_header.o .libs/libDiffractionImaJ.lax/libmar.a/swap.o .libs/libDiffractionImaJ.lax/libmar.a/utils.o .libs/libDiffractionImaJ.lax/libmar.a/pck.o .libs/libDiffractionImaJ.lax/librigaku.a/ReadRAXISImages.o .libs/libDiffractionImaJ.lax/libjpeg.a/jcapimin.o .libs/libDiffractionImaJ.lax/libjpeg.a/jcapistd.o .libs/libDiffractionImaJ.lax/libjpeg.a/jccoefct.o .libs/libDiffractionImaJ.lax/libjpeg.a/jccolor.o .libs/libDiffractio! nImaJ.lax/libjpeg.a/jcdctmgr.o .libs/libDiffractionImaJ.lax/libjpeg.a/jchuff.o .libs/libDiffractionImaJ.lax/libjpeg.a/jcinit.o .libs/libDiffractionImaJ.lax/libjpeg.a/jcmainct.o .libs/libDiffractionImaJ.lax/libjpeg.a/jcmarker.o .libs/libDiffractionImaJ.lax/libjpeg.a/jcmaster.o .libs/libDiffractionImaJ.lax/libjpeg.a/jcomapi.o .libs/libDiffractionImaJ.lax/libjpeg.a/jcparam.o .libs/libDiffractionImaJ.lax/libjpeg.a/jcphuff.o .libs/libDiffractionImaJ.lax/libjpeg.a/jcprepct.o .libs/libDiffractionImaJ.lax/libjpeg.a/jcsample.o .libs/libDiffractionImaJ.lax/libjpeg.a/jctrans.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdapimin.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdapistd.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdatadst.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdatasrc.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdcoefct.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdcolor.o .libs/libDiffractionImaJ.lax/libjpeg.a/jddctmgr.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdhuff.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdinput.o .libs/libDiffractionImaJ.lax/libjpeg.a/j! dmainct.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdmarker.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdmaster.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdmerge.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdphuff.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdpostct.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdsample.o .libs/libDiffractionImaJ.lax/libjpeg.a/jdtrans.o .libs/libDiffractionImaJ.lax/libjpeg.a/jerror.o .libs/libDiffractionImaJ.lax/libjpeg.a/jfdctflt.o .libs/libDiffractionImaJ.lax/libjpeg.a/jfdctfst.o .libs/libDiffractionImaJ.lax/libjpeg.a/jfdctint.o .libs/libDiffractionImaJ.lax/libjpeg.a/jidctflt.o .libs/libDiffractionImaJ.lax/libjpeg.a/jidctfst.o .libs/libDiffractionImaJ.lax/libjpeg.a/jidctint.o .libs/libDiffractionImaJ.lax/libjpeg.a/jidctred.o .libs/libDiffractionImaJ.lax/libjpeg.a/jquant1.o .libs/libDiffractionImaJ.lax/libjpeg.a/jquant2.o .libs/libDiffractionImaJ.lax/libjpeg.a/jutils.o .libs/libDiffractionImaJ.lax/libjpeg.a/jmemmgr.o .libs/libDiffractionImaJ.lax/libjpeg.a! /jmemnobs.o > ranlib .libs/libDiffractionImaJ.a > rm -fr .libs/libDiffractionImaJ.lax > creating libDiffractionImaJ.la > (cd .libs && rm -f libDiffractionImaJ.la && ln -s ../libDiffractionImaJ.la libDiffractionImaJ.la) > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT automask.o -MD -MP -MF .deps/automask.Tpo -c -o automask.o automask.cpp > mv -f .deps/automask.Tpo .deps/automask.Po > /bin/sh ./libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -g -O0 -o automask automask.o libDiffImage.la ./Bruker/libbruker.la ./CBFlib/src/libcbf.la ./MAR/libmar.la ./Rigaku/librigaku.la ./jpg/libjpeg.la -lm > x86_64-pc-linux-gnu-g++ -g -O0 -o automask automask.o ./.libs/libDiffImage.a ./Bruker/.libs/libbruker.a ./CBFlib/src/.libs/libcbf.a ./MAR/.libs/libmar.a ./Rigaku/.libs/librigaku.a ./jpg/.libs/libjpeg.a -lm > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT diffdump.o -MD -MP -MF .deps/diffdump.Tpo -c -o diffdump.o diffdump.cpp > mv -f .deps/diffdump.Tpo .deps/diffdump.Po > /bin/sh ./libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -g -O0 -o diffdump diffdump.o libDiffImage.la ./Bruker/libbruker.la ./CBFlib/src/libcbf.la ./MAR/libmar.la ./Rigaku/librigaku.la ./jpg/libjpeg.la -lm > x86_64-pc-linux-gnu-g++ -g -O0 -o diffdump diffdump.o ./.libs/libDiffImage.a ./Bruker/.libs/libbruker.a ./CBFlib/src/.libs/libcbf.a ./MAR/.libs/libmar.a ./Rigaku/.libs/librigaku.a ./jpg/.libs/libjpeg.a -lm > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT printpeaks.o -MD -MP -MF .deps/printpeaks.Tpo -c -o printpeaks.o printpeaks.cpp > mv -f .deps/printpeaks.Tpo .deps/printpeaks.Po > /bin/sh ./libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -g -O0 -o printpeaks printpeaks.o libDiffImage.la ./Bruker/libbruker.la ./CBFlib/src/libcbf.la ./MAR/libmar.la ./Rigaku/librigaku.la ./jpg/libjpeg.la -lm > x86_64-pc-linux-gnu-g++ -g -O0 -o printpeaks printpeaks.o ./.libs/libDiffImage.a ./Bruker/.libs/libbruker.a ./CBFlib/src/.libs/libcbf.a ./MAR/.libs/libmar.a ./Rigaku/.libs/librigaku.a ./jpg/.libs/libjpeg.a -lm > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"DiffractionImage\" -DPACKAGE_TARNAME=\"diffractionimage\" -DPACKAGE_VERSION=\"6.1.1\" -DPACKAGE_STRING=\"DiffractionImage\ 6.1.1\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"diffractionimage\" -DVERSION=\"6.1.1\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LIBM=1 -I. -I./MAR -I./CBFlib/src -I./CBFlib/include -I./jpg -I/usr/include/python2.5 -I/home/justin/.gentoo/java-config-2/current-user-vm/include -I/home/justin/.gentoo/java-config-2/current-user-vm/include/linux -g -O0 -MT diff2jpeg.o -MD -MP -MF .deps/diff2jpeg.Tpo -c -o diff2jpeg.o diff2jpeg.cpp > mv -f .deps/diff2jpeg.Tpo .deps/diff2jpeg.Po > /bin/sh ./libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -g -O0 -o diff2jpeg diff2jpeg.o libDiffImage.la ./Bruker/libbruker.la ./CBFlib/src/libcbf.la ./MAR/libmar.la ./Rigaku/librigaku.la ./jpg/libjpeg.la -lm > x86_64-pc-linux-gnu-g++ -g -O0 -o diff2jpeg diff2jpeg.o ./.libs/libDiffImage.a ./Bruker/.libs/libbruker.a ./CBFlib/src/.libs/libcbf.a ./MAR/.libs/libmar.a ./Rigaku/.libs/librigaku.a ./jpg/.libs/libjpeg.a -lm > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > test -z "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib" || /bin/mkdir -p "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib" > /bin/sh ./libtool --mode=install /usr/bin/install -c 'libDiffImage.la' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffImage.la' > /usr/bin/install -c .libs/libDiffImage.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffImage.la > /usr/bin/install -c .libs/libDiffImage.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffImage.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffImage.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffImage.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ./libtool --mode=install /usr/bin/install -c 'lib_DiffractionImage.la' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.la' > /usr/bin/install -c .libs/lib_DiffractionImage.so.0.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.so.0.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f lib_DiffractionImage.so.0.0.0 lib_DiffractionImage.so.0 || { rm -f lib_DiffractionImage.so.0 && ln -s lib_DiffractionImage.so.0.0.0 lib_DiffractionImage.so.0; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f lib_DiffractionImage.so.0.0.0 lib_DiffractionImage.so || { rm -f lib_DiffractionImage.so && ln -s lib_DiffractionImage.so.0.0.0 lib_DiffractionImage.so; }; }) > /usr/bin/install -c .libs/lib_DiffractionImage.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.la > /usr/bin/install -c .libs/lib_DiffractionImage.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ./libtool --mode=install /usr/bin/install -c 'libDiffractionImage.la' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.la' > /usr/bin/install -c .libs/libDiffractionImage.so.0.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.so.0.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libDiffractionImage.so.0.0.0 libDiffractionImage.so.0 || { rm -f libDiffractionImage.so.0 && ln -s libDiffractionImage.so.0.0.0 libDiffractionImage.so.0; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libDiffractionImage.so.0.0.0 libDiffractionImage.so || { rm -f libDiffractionImage.so && ln -s libDiffractionImage.so.0.0.0 libDiffractionImage.so; }; }) > /usr/bin/install -c .libs/libDiffractionImage.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.la > /usr/bin/install -c .libs/libDiffractionImage.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ./libtool --mode=install /usr/bin/install -c 'libDiffractionImaJ.la' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.la' > /usr/bin/install -c .libs/libDiffractionImaJ.so.0.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.so.0.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libDiffractionImaJ.so.0.0.0 libDiffractionImaJ.so.0 || { rm -f libDiffractionImaJ.so.0 && ln -s libDiffractionImaJ.so.0.0.0 libDiffractionImaJ.so.0; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libDiffractionImaJ.so.0.0.0 libDiffractionImaJ.so || { rm -f libDiffractionImaJ.so && ln -s libDiffractionImaJ.so.0.0.0 libDiffractionImaJ.so; }; }) > /usr/bin/install -c .libs/libDiffractionImaJ.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.la > /usr/bin/install -c .libs/libDiffractionImaJ.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > test -z "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin" || /bin/mkdir -p "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin" > /bin/sh ./libtool --mode=install cp -p 'automask' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/automask' > cp -p automask /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/automask > /bin/sh ./libtool --mode=install cp -p 'diffdump' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/diffdump' > cp -p diffdump /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/diffdump > /bin/sh ./libtool --mode=install cp -p 'printpeaks' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/printpeaks' > cp -p printpeaks /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/printpeaks > /bin/sh ./libtool --mode=install cp -p 'diff2jpeg' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/diff2jpeg' > cp -p diff2jpeg /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/diff2jpeg > cp -p doc/DiffractionImage.doc /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/doc > cp -p doc/DiffractionImage.html /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/html > cp -p *.py /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/share/python > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif' > if test -f /librx.a; then \ > rm -rf rx.dir; mkdir rx.dir; \ > echo 'rxdispencer routines being added to library'; \ > cp /librx.a rx.dir; cd rx.dir; \ > ar -x librx.a; cd ..; \ > ar r libccif.a rx.dir/*.o; \ > ranlib libccif.a; rm -rf rx.dir; \ > fi > ld -fPIC -shared -soname libccif.so --whole-archive libccif.a -o libccif.so > cp -p `pwd`/libccif.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libccif.a > cp -p `pwd`/cif_mmdic.lib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/cif_mmdic.lib > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libccif.a > if (test -f libccif.so); then \ > cp -p `pwd`/libccif.so /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libccif.so; \ > fi > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif' > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src' > ld -shared -soname libmmdb.so --whole-archive -o libmmdb.so libmmdb.a; ld -shared -soname libccp4c.so --whole-archive -o libccp4c.so libccp4c.a; ld -shared -soname libccp4f.so --whole-archive -o libccp4f.so libccp4f.a > if test ! -d /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4; then mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4; fi > cp -p ccp4_file_err.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_file_err.h > cp -p ccp4_program.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_program.h > cp -p ccp4_unitcell.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_unitcell.h > cp -p cmap_errno.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_errno.h > cp -p cmap_stats.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_stats.h > cp -p csymlib.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/csymlib.h > cp -p library_file.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/library_file.h > cp -p w32mvs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/w32mvs.h > cp -p ccp4_fortran.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_fortran.h > cp -p ccp4_spg.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_spg.h > cp -p ccp4_utils.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_utils.h > cp -p cmap_header.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_header.h > cp -p cmaplib.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmaplib.h > cp -p cvecmat.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cvecmat.h > cp -p mtzdata.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/mtzdata.h > cp -p ccp4_array.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_array.h > cp -p ccp4_general.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_general.h > cp -p ccp4_sysdep.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_sysdep.h > cp -p ccp4_vars.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_vars.h > cp -p cmap_labels.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_labels.h > cp -p cmaplib_f.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmaplib_f.h > cp -p overview.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/overview.h > cp -p ccp4_errno.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_errno.h > cp -p ccp4_parser.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_parser.h > cp -p ccp4_types.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/ccp4_types.h > cp -p cmap_data.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_data.h > cp -p cmap_skew.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmap_skew.h > cp -p cmtzlib.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/cmtzlib.h > cp -p library_f.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ccp4/library_f.h > if test ! -d /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb; then mkdir /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb; fi > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/bfgs_min.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/bfgs_min.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/math_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/math_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_bondmngr.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_bondmngr.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_cryst.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_cryst.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_graph.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_graph.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_model.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_model.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_symop.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_symop.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_utils.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_utils.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/file_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/file_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mattype_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mattype_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_chain.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_chain.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_defs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_defs.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_manager.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_manager.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_rwbrook.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_rwbrook.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_tables.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_tables.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_xml.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_xml.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/linalg_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/linalg_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_align.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_align.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_cifdefs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_cifdefs.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_ficif.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_ficif.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_mask.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_mask.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_sbase.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_sbase.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_title.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_title.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/random_n.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/random_n.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/machine_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/machine_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_atom.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_atom.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_coormngr.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_coormngr.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_file.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_file.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_mmcif.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_mmcif.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_selmngr.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_selmngr.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_uddata.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_uddata.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/stream_.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/stream_.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/mmdb_sbase0.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/mmdb_sbase0.h > cp -p /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb/hybrid_36.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/mmdb/hybrid_36.h > cp -p `pwd`/./libmmdb.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libmmdb.a > cp -p `pwd`/./libccp4c.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libccp4c.a > cp -p `pwd`/./libccp4f.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libccp4f.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libmmdb.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libccp4c.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/./libccp4f.a > cp -p `pwd`/libmmdb.so /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libmmdb.so; cp -p `pwd`/libccp4c.so /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libccp4c.so; cp -p `pwd`/libccp4f.so /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libccp4f.so; > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src' > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm' > if /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" -DPACKAGE_STRING=\"ssm\ 1.0\" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ssm_superpose.lo -MD -MP -MF ".deps/ssm_superpose.Tpo" -c -o ssm_superpose.lo ssm_superpose.cpp; \ > then mv -f ".deps/ssm_superpose.Tpo" ".deps/ssm_superpose.Plo"; else rm -f ".deps/ssm_superpose.Tpo"; exit 1; fi > mkdir .libs > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" "-DPACKAGE_STRING=\"ssm 1.0\"" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ssm_superpose.lo -MD -MP -MF .deps/ssm_superpose.Tpo -c ssm_superpose.cpp -fPIC -DPIC -o .libs/ssm_superpose.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" "-DPACKAGE_STRING=\"ssm 1.0\"" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ssm_superpose.lo -MD -MP -MF .deps/ssm_superpose.Tpo -c ssm_superpose.cpp -o ssm_superpose.o >/dev/null 2>&1 > if /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" -DPACKAGE_STRING=\"ssm\ 1.0\" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ss_csia.lo -MD -MP -MF ".deps/ss_csia.Tpo" -c -o ss_csia.lo ss_csia.cpp; \ > then mv -f ".deps/ss_csia.Tpo" ".deps/ss_csia.Plo"; else rm -f ".deps/ss_csia.Tpo"; exit 1; fi > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" "-DPACKAGE_STRING=\"ssm 1.0\"" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ss_csia.lo -MD -MP -MF .deps/ss_csia.Tpo -c ss_csia.cpp -fPIC -DPIC -o .libs/ss_csia.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" "-DPACKAGE_STRING=\"ssm 1.0\"" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ss_csia.lo -MD -MP -MF .deps/ss_csia.Tpo -c ss_csia.cpp -o ss_csia.o >/dev/null 2>&1 > if /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" -DPACKAGE_STRING=\"ssm\ 1.0\" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ss_vxedge.lo -MD -MP -MF ".deps/ss_vxedge.Tpo" -c -o ss_vxedge.lo ss_vxedge.cpp; \ > then mv -f ".deps/ss_vxedge.Tpo" ".deps/ss_vxedge.Plo"; else rm -f ".deps/ss_vxedge.Tpo"; exit 1; fi > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" "-DPACKAGE_STRING=\"ssm 1.0\"" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ss_vxedge.lo -MD -MP -MF .deps/ss_vxedge.Tpo -c ss_vxedge.cpp -fPIC -DPIC -o .libs/ss_vxedge.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" "-DPACKAGE_STRING=\"ssm 1.0\"" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ss_vxedge.lo -MD -MP -MF .deps/ss_vxedge.Tpo -c ss_vxedge.cpp -o ss_vxedge.o >/dev/null 2>&1 > if /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" -DPACKAGE_STRING=\"ssm\ 1.0\" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ssm_align.lo -MD -MP -MF ".deps/ssm_align.Tpo" -c -o ssm_align.lo ssm_align.cpp; \ > then mv -f ".deps/ssm_align.Tpo" ".deps/ssm_align.Plo"; else rm -f ".deps/ssm_align.Tpo"; exit 1; fi > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" "-DPACKAGE_STRING=\"ssm 1.0\"" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ssm_align.lo -MD -MP -MF .deps/ssm_align.Tpo -c ssm_align.cpp -fPIC -DPIC -o .libs/ssm_align.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" "-DPACKAGE_STRING=\"ssm 1.0\"" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ssm_align.lo -MD -MP -MF .deps/ssm_align.Tpo -c ssm_align.cpp -o ssm_align.o >/dev/null 2>&1 > if /bin/sh ./libtool --tag=CXX --mode=compile x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" -DPACKAGE_STRING=\"ssm\ 1.0\" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ss_graph.lo -MD -MP -MF ".deps/ss_graph.Tpo" -c -o ss_graph.lo ss_graph.cpp; \ > then mv -f ".deps/ss_graph.Tpo" ".deps/ss_graph.Plo"; else rm -f ".deps/ss_graph.Tpo"; exit 1; fi > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" "-DPACKAGE_STRING=\"ssm 1.0\"" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ss_graph.lo -MD -MP -MF .deps/ss_graph.Tpo -c ss_graph.cpp -fPIC -DPIC -o .libs/ss_graph.o > x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" "-DPACKAGE_STRING=\"ssm 1.0\"" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT ss_graph.lo -MD -MP -MF .deps/ss_graph.Tpo -c ss_graph.cpp -o ss_graph.o >/dev/null 2>&1 > /bin/sh ./libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -L/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -lmmdb -o libssm.la -rpath /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib ssm_superpose.lo ss_csia.lo ss_vxedge.lo ssm_align.lo ss_graph.lo -lm > x86_64-pc-linux-gnu-g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtbeginS.o .libs/ssm_superpose.o .libs/ss_csia.o .libs/ss_vxedge.o .libs/ssm_align.o .libs/ss_graph.o -L/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -lmmdb -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/../../../../lib64/crtn.o -march=core2 -Wl,-soname -Wl,libssm.so.0 -o .libs/libssm.so.0.0.0 > (cd .libs && rm -f libssm.so.0 && ln -s libssm.so.0.0.0 libssm.so.0) > (cd .libs && rm -f libssm.so && ln -s libssm.so.0.0.0 libssm.so) > ar cru .libs/libssm.a ssm_superpose.o ss_csia.o ss_vxedge.o ssm_align.o ss_graph.o > ranlib .libs/libssm.a > creating libssm.la > (cd .libs && rm -f libssm.la && ln -s ../libssm.la libssm.la) > if x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"ssm\" -DPACKAGE_TARNAME=\"ssm\" -DPACKAGE_VERSION=\"1.0\" -DPACKAGE_STRING=\"ssm\ 1.0\" -DPACKAGE_BUGREPORT=\"[log in to unmask]\" -DPACKAGE=\"ssm\" -DVERSION=\"1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_RINT=1 -DHAVE_SQRT=1 -DHAVE_LIBM=1 -I. -I. -I/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src/mmdb -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -MT superpose.o -MD -MP -MF ".deps/superpose.Tpo" -c -o superpose.o superpose.cpp; \ > then mv -f ".deps/superpose.Tpo" ".deps/superpose.Po"; else rm -f ".deps/superpose.Tpo"; exit 1; fi > /bin/sh ./libtool --tag=CXX --mode=link x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -L/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src -lmmdb -o superpose superpose.o libssm.la -lm > x86_64-pc-linux-gnu-g++ -O2 -march=core2 -pipe -fomit-frame-pointer -fPIC -o .libs/superpose superpose.o -L/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/src ./.libs/libssm.so -lmmdb -lm -Wl,--rpath -Wl,/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > creating superpose > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm' > test -z "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib" || mkdir -p -- "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib" > /bin/sh ./libtool --mode=install /usr/bin/install -c 'libssm.la' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.la' > /usr/bin/install -c .libs/libssm.so.0.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.so.0.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libssm.so.0.0.0 libssm.so.0 || { rm -f libssm.so.0 && ln -s libssm.so.0.0.0 libssm.so.0; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libssm.so.0.0.0 libssm.so || { rm -f libssm.so && ln -s libssm.so.0.0.0 libssm.so; }; }) > /usr/bin/install -c .libs/libssm.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.la > /usr/bin/install -c .libs/libssm.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > test -z "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin" || mkdir -p -- "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin" > /bin/sh ./libtool --mode=install cp -p 'superpose' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/superpose' > cp -p .libs/superpose /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/superpose > test -z "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm" || mkdir -p -- "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm" > cp -p 'ss_graph.h' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm/ss_graph.h' > cp -p 'ssm_superpose.h' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm/ssm_superpose.h' > cp -p 'ss_csia.h' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm/ss_csia.h' > cp -p 'ss_vxedge.h' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm/ss_vxedge.h' > cp -p 'ssm_align.h' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm/ssm_align.h' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm' > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/data' > gfortran -O2 -march=core2 -pipe -fomit-frame-pointer -fno-second-underscore -fno-stack-protector -fPIC -o fontpack /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/data/fontpack.f -L../src -L/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -lccp4f -lccp4c -lmmdb -L/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ccif -lccif -L/usr/lib64 -llapack -lstdc++ -Wl,-rpath,/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib -lm > rm -f font84.dat > test -f font84.ascii || ln -s /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/data/font84.ascii . > ./fontpack > cp `pwd`/font84.dat /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/font84.dat > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/data' > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1' > if test -n "lib/clipper"; then cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper; \ > make -i -l 8 ; else true; fi ; \ > make install > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > Making all in phs > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/phs' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/phs' > Making all in contrib > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/contrib' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/contrib' > Making all in cif > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cif' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cif' > Making all in mmdb > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdb' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdb' > Making all in mmdbold > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdbold' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdbold' > Making all in minimol > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/minimol' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/minimol' > Making all in ccp4 > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/ccp4' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/ccp4' > Making all in cns > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cns' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cns' > Making all in core > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/core' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/core' > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > make[2]: Nothing to be done for `all-am'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > Making install in phs > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/phs' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/phs' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-phs.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.la > /usr/bin/install -c .libs/libclipper-phs.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-phs.so.2.0.0 libclipper-phs.so.2 || { rm -f libclipper-phs.so.2 && ln -s libclipper-phs.so.2.0.0 libclipper-phs.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-phs.so.2.0.0 libclipper-phs.so || { rm -f libclipper-phs.so && ln -s libclipper-phs.so.2.0.0 libclipper-phs.so; }; }) > /usr/bin/install -c .libs/libclipper-phs.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.la > /usr/bin/install -c .libs/libclipper-phs.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-phs.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/phs > cp -p phs_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/phs/phs_io.h > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/phs' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/phs' > Making install in contrib > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/contrib' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/contrib' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-contrib.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.la > /usr/bin/install -c .libs/libclipper-contrib.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-contrib.so.2.0.0 libclipper-contrib.so.2 || { rm -f libclipper-contrib.so.2 && ln -s libclipper-contrib.so.2.0.0 libclipper-contrib.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-contrib.so.2.0.0 libclipper-contrib.so || { rm -f libclipper-contrib.so && ln -s libclipper-contrib.so.2.0.0 libclipper-contrib.so; }; }) > /usr/bin/install -c .libs/libclipper-contrib.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.la > /usr/bin/install -c .libs/libclipper-contrib.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-contrib.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib > cp -p convolution_search.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/convolution_search.h > cp -p mapfilter.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/mapfilter.h > cp -p sfscale.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/sfscale.h > cp -p edcalc.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/edcalc.h > cp -p originmatch.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/originmatch.h > cp -p sfweight.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/sfweight.h > cp -p fffear.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/fffear.h > cp -p sfcalc.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/sfcalc.h > cp -p skeleton.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/skeleton.h > cp -p function_object_bases.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/function_object_bases.h > cp -p sfcalc_obs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/contrib/sfcalc_obs.h > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/contrib' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/contrib' > Making install in cif > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cif' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cif' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-cif.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.la > /usr/bin/install -c .libs/libclipper-cif.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-cif.so.2.0.0 libclipper-cif.so.2 || { rm -f libclipper-cif.so.2 && ln -s libclipper-cif.so.2.0.0 libclipper-cif.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-cif.so.2.0.0 libclipper-cif.so || { rm -f libclipper-cif.so && ln -s libclipper-cif.so.2.0.0 libclipper-cif.so; }; }) > /usr/bin/install -c .libs/libclipper-cif.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.la > /usr/bin/install -c .libs/libclipper-cif.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cif.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cif > cp -p cif_data_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cif/cif_data_io.h > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cif' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cif' > Making install in mmdb > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdb' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdb' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-mmdb.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.la > /usr/bin/install -c .libs/libclipper-mmdb.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-mmdb.so.2.0.0 libclipper-mmdb.so.2 || { rm -f libclipper-mmdb.so.2 && ln -s libclipper-mmdb.so.2.0.0 libclipper-mmdb.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-mmdb.so.2.0.0 libclipper-mmdb.so || { rm -f libclipper-mmdb.so && ln -s libclipper-mmdb.so.2.0.0 libclipper-mmdb.so; }; }) > /usr/bin/install -c .libs/libclipper-mmdb.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.la > /usr/bin/install -c .libs/libclipper-mmdb.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdb.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdb > cp -p clipper_mmdb.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdb/clipper_mmdb.h > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdb' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdb' > Making install in mmdbold > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdbold' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdbold' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-mmdbold.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.la > /usr/bin/install -c .libs/libclipper-mmdbold.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-mmdbold.so.2.0.0 libclipper-mmdbold.so.2 || { rm -f libclipper-mmdbold.so.2 && ln -s libclipper-mmdbold.so.2.0.0 libclipper-mmdbold.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-mmdbold.so.2.0.0 libclipper-mmdbold.so || { rm -f libclipper-mmdbold.so && ln -s libclipper-mmdbold.so.2.0.0 libclipper-mmdbold.so; }; }) > /usr/bin/install -c .libs/libclipper-mmdbold.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.la > /usr/bin/install -c .libs/libclipper-mmdbold.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-mmdbold.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdbold > cp -p clipper_mmdb.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdbold/clipper_mmdb.h > cp -p clipper_mmdb_wrapper.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdbold/clipper_mmdb_wrapper.h > cp -p clipper_mmdb_types.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdbold/clipper_mmdb_types.h > cp -p container_mmdb.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/mmdbold/container_mmdb.h > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdbold' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/mmdbold' > Making install in minimol > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/minimol' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/minimol' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-minimol.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.la > /usr/bin/install -c .libs/libclipper-minimol.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-minimol.so.2.0.0 libclipper-minimol.so.2 || { rm -f libclipper-minimol.so.2 && ln -s libclipper-minimol.so.2.0.0 libclipper-minimol.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-minimol.so.2.0.0 libclipper-minimol.so || { rm -f libclipper-minimol.so && ln -s libclipper-minimol.so.2.0.0 libclipper-minimol.so; }; }) > /usr/bin/install -c .libs/libclipper-minimol.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.la > /usr/bin/install -c .libs/libclipper-minimol.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-minimol.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol > cp -p container_minimol.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/container_minimol.h > cp -p minimol_data.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/minimol_data.h > cp -p minimol_seq.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/minimol_seq.h > cp -p minimol.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/minimol.h > cp -p minimol_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/minimol_io.h > cp -p minimol_utils.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimol/minimol_utils.h > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/minimol' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/minimol' > Making install in ccp4 > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/ccp4' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/ccp4' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-ccp4.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.la > /usr/bin/install -c .libs/libclipper-ccp4.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-ccp4.so.2.0.0 libclipper-ccp4.so.2 || { rm -f libclipper-ccp4.so.2 && ln -s libclipper-ccp4.so.2.0.0 libclipper-ccp4.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-ccp4.so.2.0.0 libclipper-ccp4.so || { rm -f libclipper-ccp4.so && ln -s libclipper-ccp4.so.2.0.0 libclipper-ccp4.so; }; }) > /usr/bin/install -c .libs/libclipper-ccp4.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.la > /usr/bin/install -c .libs/libclipper-ccp4.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-ccp4.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/ccp4 > cp -p ccp4_map_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/ccp4/ccp4_map_io.h > cp -p ccp4_mtz_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/ccp4/ccp4_mtz_io.h > cp -p ccp4_mtz_types.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/ccp4/ccp4_mtz_types.h > cp -p ccp4_utils.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/ccp4/ccp4_utils.h > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/ccp4' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/ccp4' > Making install in cns > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cns' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cns' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-cns.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.la > /usr/bin/install -c .libs/libclipper-cns.so.0.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.so.0.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-cns.so.0.0.0 libclipper-cns.so.0 || { rm -f libclipper-cns.so.0 && ln -s libclipper-cns.so.0.0.0 libclipper-cns.so.0; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-cns.so.0.0.0 libclipper-cns.so || { rm -f libclipper-cns.so && ln -s libclipper-cns.so.0.0.0 libclipper-cns.so; }; }) > /usr/bin/install -c .libs/libclipper-cns.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.la > /usr/bin/install -c .libs/libclipper-cns.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-cns.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cns > cp -p cns_hkl_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cns/cns_hkl_io.h > cp -p cns_map_io.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/cns/cns_map_io.h > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cns' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/cns' > Making install in core > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/core' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/core' > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > /bin/sh ../../libtool --mode=install /usr/bin/install -c libclipper-core.la /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.la > /usr/bin/install -c .libs/libclipper-core.so.2.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.so.2.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-core.so.2.0.0 libclipper-core.so.2 || { rm -f libclipper-core.so.2 && ln -s libclipper-core.so.2.0.0 libclipper-core.so.2; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libclipper-core.so.2.0.0 libclipper-core.so || { rm -f libclipper-core.so && ln -s libclipper-core.so.2.0.0 libclipper-core.so; }; }) > /usr/bin/install -c .libs/libclipper-core.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.la > /usr/bin/install -c .libs/libclipper-core.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libclipper-core.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ../../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core > cp -p atomsf.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/atomsf.h > cp -p container_types.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/container_types.h > cp -p nxmap_operator.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/nxmap_operator.h > cp -p cell.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/cell.h > cp -p coords.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/coords.h > cp -p ramachandran.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/ramachandran.h > cp -p clipper_instance.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_instance.h > cp -p derivs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/derivs.h > cp -p resol_basisfn.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/resol_basisfn.h > cp -p clipper_memory.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_memory.h > cp -p fftmap.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/fftmap.h > cp -p resol_fn.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/resol_fn.h > cp -p clipper_message.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_message.h > cp -p fftmap_sparse.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/fftmap_sparse.h > cp -p resol_targetfn.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/resol_targetfn.h > cp -p clipper_precision.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_precision.h > cp -p hkl_compute.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_compute.h > cp -p rotation.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/rotation.h > cp -p clipper_stats.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_stats.h > cp -p hkl_data.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_data.h > cp -p spacegroup.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/spacegroup.h > cp -p clipper_sysdep.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_sysdep.h > cp -p hkl_datatypes.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_datatypes.h > cp -p spacegroup_data.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/spacegroup_data.h > cp -p clipper_test.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_test.h > cp -p hkl_info.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_info.h > cp -p symop.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/symop.h > cp -p clipper_types.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_types.h > cp -p hkl_lookup.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_lookup.h > cp -p clipper_util.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/clipper_util.h > cp -p hkl_operators.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/hkl_operators.h > cp -p container.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/container.h > cp -p map_interp.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/map_interp.h > cp -p xmap.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/xmap.h > cp -p container_hkl.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/container_hkl.h > cp -p map_utils.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/map_utils.h > cp -p container_map.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/container_map.h > cp -p nxmap.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/core/nxmap.h > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/core' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper/core' > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > make[3]: Nothing to be done for `install-exec-am'. > /bin/sh ../mkinstalldirs /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper > cp -p clipper-ccp4.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-ccp4.h > cp -p clipper-contrib.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-contrib.h > cp -p clipper-phs.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-phs.h > cp -p clipper-cctbx.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-cctbx.h > cp -p clipper-minimol.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-minimol.h > cp -p clipper.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper.h > cp -p clipper-cif.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-cif.h > cp -p clipper-mmdb.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-mmdb.h > cp -p minimal-clipper-hkl.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimal-clipper-hkl.h > cp -p clipper-cns.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-cns.h > cp -p clipper-mmdbold.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/clipper-mmdbold.h > cp -p minimal-clipper-map.h /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/clipper/minimal-clipper-map.h > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/clipper/clipper' > if test -n "lib/ssm"; then cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm; \ > make -i -l 8 ; else true; fi ; \ > make install > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm' > make[1]: Nothing to be done for `all'. > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm' > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm' > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm' > test -z "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib" || mkdir -p -- "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib" > /bin/sh ./libtool --mode=install /usr/bin/install -c 'libssm.la' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.la' > /usr/bin/install -c .libs/libssm.so.0.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.so.0.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libssm.so.0.0.0 libssm.so.0 || { rm -f libssm.so.0 && ln -s libssm.so.0.0.0 libssm.so.0; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libssm.so.0.0.0 libssm.so || { rm -f libssm.so && ln -s libssm.so.0.0.0 libssm.so; }; }) > /usr/bin/install -c .libs/libssm.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.la > /usr/bin/install -c .libs/libssm.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libssm.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > test -z "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin" || mkdir -p -- "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin" > /bin/sh ./libtool --mode=install cp -p 'superpose' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/superpose' > cp -p .libs/superpose /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/superpose > test -z "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm" || mkdir -p -- "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm" > cp -p 'ss_graph.h' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm/ss_graph.h' > cp -p 'ssm_superpose.h' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm/ssm_superpose.h' > cp -p 'ss_csia.h' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm/ss_csia.h' > cp -p 'ss_vxedge.h' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm/ss_vxedge.h' > cp -p 'ssm_align.h' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/include/ssm/ssm_align.h' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm' > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/ssm' > if test -n "lib/DiffractionImage"; then cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage; \ > make -i -l 8 ; else true; fi ; \ > make install > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > Making all in CBFlib > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > Making all in src > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib/src' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Nothing to be done for `all'. > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib/src' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Nothing to be done for `all-am'. > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > Making all in Bruker > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Bruker' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Bruker' > Making all in MAR > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/MAR' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/MAR' > Making all in Rigaku > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Rigaku' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Rigaku' > Making all in jpg > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/jpg' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[2]: Nothing to be done for `all'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/jpg' > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[2]: Nothing to be done for `all-am'. > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > Making install in CBFlib > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > Making install in src > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib/src' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib/src' > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Nothing to be done for `install-exec-am'. > make[4]: Nothing to be done for `install-data-am'. > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib/src' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib/src' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[5]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[5]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Nothing to be done for `install-exec-am'. > make[4]: Nothing to be done for `install-data-am'. > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/CBFlib' > Making install in Bruker > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Bruker' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Bruker' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Nothing to be done for `install-exec-am'. > make[3]: Nothing to be done for `install-data-am'. > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Bruker' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Bruker' > Making install in MAR > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/MAR' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/MAR' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Nothing to be done for `install-exec-am'. > make[3]: Nothing to be done for `install-data-am'. > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/MAR' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/MAR' > Making install in Rigaku > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Rigaku' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Rigaku' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Nothing to be done for `install-exec-am'. > make[3]: Nothing to be done for `install-data-am'. > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Rigaku' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/Rigaku' > Making install in jpg > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/jpg' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/jpg' > make[4]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[4]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Nothing to be done for `install-exec-am'. > make[3]: Nothing to be done for `install-data-am'. > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/jpg' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage/jpg' > make[2]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[3]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > test -z "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib" || /bin/mkdir -p "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib" > /bin/sh ./libtool --mode=install /usr/bin/install -c 'libDiffImage.la' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffImage.la' > /usr/bin/install -c .libs/libDiffImage.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffImage.la > /usr/bin/install -c .libs/libDiffImage.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffImage.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffImage.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffImage.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ./libtool --mode=install /usr/bin/install -c 'lib_DiffractionImage.la' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.la' > /usr/bin/install -c .libs/lib_DiffractionImage.so.0.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.so.0.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f lib_DiffractionImage.so.0.0.0 lib_DiffractionImage.so.0 || { rm -f lib_DiffractionImage.so.0 && ln -s lib_DiffractionImage.so.0.0.0 lib_DiffractionImage.so.0; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f lib_DiffractionImage.so.0.0.0 lib_DiffractionImage.so || { rm -f lib_DiffractionImage.so && ln -s lib_DiffractionImage.so.0.0.0 lib_DiffractionImage.so; }; }) > /usr/bin/install -c .libs/lib_DiffractionImage.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.la > /usr/bin/install -c .libs/lib_DiffractionImage.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/lib_DiffractionImage.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ./libtool --mode=install /usr/bin/install -c 'libDiffractionImage.la' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.la' > /usr/bin/install -c .libs/libDiffractionImage.so.0.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.so.0.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libDiffractionImage.so.0.0.0 libDiffractionImage.so.0 || { rm -f libDiffractionImage.so.0 && ln -s libDiffractionImage.so.0.0.0 libDiffractionImage.so.0; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libDiffractionImage.so.0.0.0 libDiffractionImage.so || { rm -f libDiffractionImage.so && ln -s libDiffractionImage.so.0.0.0 libDiffractionImage.so; }; }) > /usr/bin/install -c .libs/libDiffractionImage.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.la > /usr/bin/install -c .libs/libDiffractionImage.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImage.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > /bin/sh ./libtool --mode=install /usr/bin/install -c 'libDiffractionImaJ.la' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.la' > /usr/bin/install -c .libs/libDiffractionImaJ.so.0.0.0 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.so.0.0.0 > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libDiffractionImaJ.so.0.0.0 libDiffractionImaJ.so.0 || { rm -f libDiffractionImaJ.so.0 && ln -s libDiffractionImaJ.so.0.0.0 libDiffractionImaJ.so.0; }; }) > (cd /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib && { ln -s -f libDiffractionImaJ.so.0.0.0 libDiffractionImaJ.so || { rm -f libDiffractionImaJ.so && ln -s libDiffractionImaJ.so.0.0.0 libDiffractionImaJ.so; }; }) > /usr/bin/install -c .libs/libDiffractionImaJ.lai /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.la > /usr/bin/install -c .libs/libDiffractionImaJ.a /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.a > chmod 644 /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.a > ranlib /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/libDiffractionImaJ.a > PATH="$PATH:/sbin" ldconfig -n /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > ---------------------------------------------------------------------- > Libraries have been installed in: > /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib > > If you ever happen to want to link against installed libraries > in a given directory, LIBDIR, you must either use libtool, and > specify the full pathname of the library, or use the `-LLIBDIR' > flag during linking and do at least one of the following: > - add LIBDIR to the `LD_LIBRARY_PATH' environment variable > during execution > - add LIBDIR to the `LD_RUN_PATH' environment variable > during linking > - use the `-Wl,--rpath -Wl,LIBDIR' linker flag > - have your system administrator add LIBDIR to `/etc/ld.so.conf' > > See any operating system documentation about shared libraries for > more information, such as the ld(1) and ld.so(8) manual pages. > ---------------------------------------------------------------------- > test -z "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin" || /bin/mkdir -p "/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin" > /bin/sh ./libtool --mode=install cp -p 'automask' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/automask' > cp -p automask /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/automask > /bin/sh ./libtool --mode=install cp -p 'diffdump' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/diffdump' > cp -p diffdump /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/diffdump > /bin/sh ./libtool --mode=install cp -p 'printpeaks' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/printpeaks' > cp -p printpeaks /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/printpeaks > /bin/sh ./libtool --mode=install cp -p 'diff2jpeg' '/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/diff2jpeg' > cp -p diff2jpeg /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/bin/diff2jpeg > cp -p doc/DiffractionImage.doc /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/doc > cp -p doc/DiffractionImage.html /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/html > cp -p *.py /var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/share/python > make[3]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[2]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/DiffractionImage' > cd lib/data; make -l 8 > make[1]: Entering directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/data' > make[1]: Nothing to be done for `all'. > make[1]: Leaving directory `/var/tmp/portage/sci-libs/ccp4-libs-6.1.1/work/ccp4-6.1.1/lib/data' > >>> Source compiled. -- *********************************************************************** * * * Dr. Martyn Winn * * * * STFC Daresbury Laboratory, Daresbury, Warrington, WA4 4AD, U.K. * * Tel: +44 1925 603455 E-mail: [log in to unmask] * * Fax: +44 1925 603825 Skype name: martyn.winn * * URL: http://www.ccp4.ac.uk/martyn/ * ***********************************************************************