[Extended Paper Submission Deadline: 19 Jan 2009] 2nd International Workshop on Optimal Data Mining in Gene Expression Analysis (ODGEA’09) in conjunction with 5th International Symposium on Bioinformatics Research and Applications (ISBRA’09) http://giscompute.gis.a-star.edu.sg/~karu/ODGEA09/CFP.html May 13-16, 2009 Nova Southeastern University Ft. Lauderdale, Florida, USA The rapid development of several high-throughput gene expression monitoring technologies in the past decade has facilitated the generation of a huge amount of gene expression data. The data could either be rich or poor in the number of samples in a wide variety of experimental design setups. Aforementioned factors led to a need to develop suitable statistical procedures for optimal analysis, visualization and interpretation of the data. We are soliciting original research papers (including significant works in progress) involving gene expression analysis, including the following: A. Novel supervised and unsupervised analysis and visualization methodologies B. Novel experimental designs, problems and suitable procedures to solve them C. Optimal feature selection for tumor classification and patient-outcome prediction D. Integrative analysis of gene expression data obtained from different platforms and laboratories E. Interpretation of gene expression data with other datasets such as binding site data, copy number data and proteomics data. F. Significance assessment of predictions SUBMISSION and PUBLICATION The workshop proceedings will be published along with the ISBRA proceedings in Springer-Verlag's Lecture Notes in Bioinformatics series. Papers must be submitted electronically by following the instructions at: http://www.cs.gsu.edu/isbra09/papers.html Submissions must be formatted using the Springer LNCS style and must not exceed 12 pages in length. Simultaneous submission to journals or other conferences with published proceedings is not allowed. Further, it is anticipated that a special issue of a major bioinformatics journal will be devoted to extended versions of best conference and workshop papers. IMPORTANT DATES 19 Jan 2009 Submission of papers (Deadline Extended) 06 Feb 2009 Notification 20 Feb 2009 Camera Ready Papers 13/14 May 2009 Workshop Presentation INVITED KEYNOTE SPEAKER (Please check our web site for updated list) List of Accepted Papers (Please check our web site for updated list) WORKSHOP ORGANIZERS General Chair: Lonnie R. Welch, Stuckey Professor 322A Stocker Center School of Electrical Engineering and Computer Science Ohio University Athens, OH 45701-2979 [log in to unmask] Program Chairs: R. Krishna Murthy Karuturi Sr Research Scientist Computational & Mathematical Biology Genome Institute of Singapore A*STAR (Agency for Science, Technology and Research) #02-01, Genome, 60 Biopolis ST Republic of Singapore 138672 [log in to unmask] Qihua Tan, Associate Professor Dept of Biochemistry, Pharmacology and Genetics Odense University Hospital Sdr. Boulevard 29 DK-5000, Odense C Denmark [log in to unmask] Jahangheer Shareef Shaik, Staff Scientist, Dept. of pathology and Immunology, Washington University, St. Louis, Missouri [log in to unmask] Program Committee (tentative): (please check our web site for updated list) Jing Hua Zhao, Medical Research Council in Cambridge, UK Xiaoli Li, Institute of Infocom Research, A-Star, Singapore Chengpeng Bi, University of Missouri - Kansas City, USA. Talamuthu Anbupalam, Genome Institute of Singapore, A-Star, Singapore Meena Sakharkar, Nanyang Technological University, Singapore Zhengxin Chen, University of Nebraska, Omaha, USA Vinhthuy Phan, University of Memphis, USA Parvathi Chundi, University of Nebraska, Omaha, USA Lih Deng, University of Memphis, USA Sach Mukherjee, University of Warwick, UK Yuri Orlov, Genome Institute of Singapore, A-Star, Singapore Vinsensius Vega, Genome Institute of Singapore, A-Star, Singapore Huaien Luo, Genome Institute of Singapore, A-star, Singapore