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Jin, WFU_PickAtlas shows up for me in the drop-down toolbox list under Windows with both SPM2 and SPM5. Be sure that you have the latest version available here: http://fmri.wfubmc.edu/cms/software Kathy Pearson UAB Psychology -----Original Message----- From: SPM (Statistical Parametric Mapping) [mailto:[log in to unmask]] On Behalf Of Jin Bo Sent: Tuesday, October 07, 2008 8:22 AM To: [log in to unmask] Subject: Re: [SPM] How to mask 2-level results for specific brain regions Thank you very much. This is exactly what I want. However, after I add the WFU_PickAtlas under toolbox directory, add the path on top of SPM, I cannot see it appeared in the toolbox menu. Is there something special about running this in windows? On the manual, it says that this has not been tested in windows. Thank you very much Jin Quoting "MCLAREN, Donald" <[log in to unmask]>: > If you have the WFU_PickAtlas toolbox installed.... > > Open it from within SPM, from the toolbox menu. Then make your ROI and save > it. Close the PickAtlas. > > Now, when you go through the results menu, there will be an ROI open, click > yes. > Then, if you've saved the file; click saved file (otherwise select the other > open). > > Hopefully, this is what you wanted to do. > > On Mon, Oct 6, 2008 at 10:50 AM, Jin <[log in to unmask]> wrote: > >> Hi, All, >> >> I am trying to mask my 2-level results for one particular brain area, e.g. >> BA >> 9&46. I can get that template image file from WFU_PickAtlas. Where is the >> place that I can select this region as a mask on top of my group >> activation? >> >> Thank you very much >> >> Jin >> > > > > -- > Best Regards, Donald McLaren > ===================== > D.G. McLaren > University of Wisconsin - Madison > Neuroscience Training Program > Office: (608) 265-9672 > Lab: (608) 256-1901 ext 12914 > Cell: (773) 406 2464 > ===================== > This e-mail contains CONFIDENTIAL INFORMATION which may contain PROTECTED > HEALTHCARE INFORMATION and may also be LEGALLY PRIVILEGED and which is > intended only for the use of the individual or entity named above. If the > reader of the e-mail is not the intended recipient or the employee or agent > responsible for delivering it to the intended recipient, you are hereby > notified that you are in possession of confidential and privileged > information. Any unauthorized use, disclosure, copying or the taking of any > action in reliance on the contents of this information is strictly > prohibited and may be unlawful. If you have received this e-mail > unintentionally, please immediately notify the sender via telephone at (773) > 406 2464 or email. >