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I just recently purchased a Mac Pro Intel with Leopard.  I was able to
install, Coot and ccp4.  Both were not as straight forward as I would have
hoped but still possible.

For Coot:

Go to:

http://sage.ucsc.edu/~wgscott/xtal/wiki/index.php/Coot-0.5-pre-1-968_for_Intel_10.5_only

Download : coot-10.5-pre-1-968-intel-April20_2008.tgz<http://sage.ucsc.edu/%7Ewgscott/xtal/coot/coot-10.5-pre-1-968-intel-April20_2008.tgz>

Follow instructions on the page.  Beware, when I down loaded it, OSX
immediately unzipped it.  I am not a guru for OSX, so I just gzipped it
prior to running the command:

sudo tar xvfz  coot-10.5-pre-1-968-intel-April20_2008.tar.gz


As you probably experienced, coot wouldn't run at this point.  No fear, you
will need to install the X11.pkg version 2.20.1.   Follow the instructions
on the  page:

http://trac.macosforge.org/projects/xquartz

Once you restart the computer, download the
CootAutoOpener<http://sage.ucsc.edu/%7Ewgscott/xtal/coot/CootAutoOpener.dmg.gz>.
If you placed Coot in the directory as the instructions state, it should
run.

Note.  Tried the CCP4 coot download page and that coot version didn't work.


For CCP4:

Was a little tricky.  I had to get some help on this one for the proper unix
commands.  Go to the CCP4 site and download the OSX version.  Install BOTH
the TLK/BLK programs and CCP4 site.  Next, I couldn't find anywhere, had to
run the following commands in the bin directory to get it to work:

source ccp4i.sh  # (for bash shell; sets up ccp4's directories, make sure
that the paths in this file accurately reflect reality; had an issue here)

Then should be able to run:

ccp4i

When I ran it, I had to source the file every time prior to execution.
There may be a better way to do this but I just created an executable script
to run it for me.

Hope this helps,

Scott



<http://sage.ucsc.edu/%7Ewgscott/xtal/coot/coot-10.5-pre-1-968-intel-April20_2008.tgz>




On Wed, Aug 20, 2008 at 9:33 AM, Paul Emsley <[log in to unmask]>wrote:

> Winter, G (Graeme) wrote:
>
>>  I have an OS X leopard machine which I would really like to get coot
>> working on, but it appears to involve messing with the X system and / or
>> fink, neither of which I really fancy. Now I appreciate that there is
>> something broken about the X window (no idea what though) but I was
>> wondering if it is possible to get coot working with it anyway?
>>  I looked at the X window update on Bill Scott's page, but the idea of
>> having to reinstall it every time Apple decide to update my machine didn't
>> really appeal.
>>
>
> Doesn't Bill provide a stand-alone version?
>
> If not that then the answer, I think, is "no not yet" - I intend to make
> such a thing after returning from IUCr.
>
> You are not alone.
>
> Paul.
>
>


-- 
Scott D. Pegan, Ph.D.
Senior Research Specialist
Center for Pharmaceutical
Biotechnology
University of Illinois at Chicago