Ok, well I shall try and get it working on my Mac and let you know if I have any more problems.
Many thanks for all your help.
Emma
________________________________________
From: FSL - FMRIB's Software Library [[log in to unmask]] On Behalf Of Matthew Webster [[log in to unmask]]
Sent: Tuesday, July 01, 2008 3:43 PM
To: [log in to unmask]
Subject: Re: [FSL] FSL installation on FSL_vm5_32
Hi,
Thanks for the data - are you sure you are running in our
supplied VM - the FSLMACHTYPE looks like it could just be the ubuntu
OS? If you still have an OSX machine available there is a 4.0.4 OSX
version available on our download page.
Regards
Matthew
> emma@clinicalneuro-desktop:~$ echo $FSLMACHTYPE
> gnu_32-gcc4.2
> emma@clinicalneuro-desktop:~$ ls -al /usr/local/fsl/bin
> total 185120
> drwxr-xr-x 3 7959 999 4096 2008-03-25 10:58 .
> drwxr-xr-x 13 7959 999 4096 2008-03-31 16:08 ..
> -rwxr-xr-x 1 7959 999 12941 2007-11-14 14:44 add4bytes
> -rwxr-xr-x 1 7959 999 1890786 2007-11-14 14:43 applywarp
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 ApplyXFM -> Runtcl
> -rwxr-xr-x 1 7959 999 1908897 2007-11-14 14:42 applyxfm4D
> -rwxr-xr-x 1 7959 999 1143692 2007-11-14 16:06 atlasquery
> -rwxr-xr-x 1 7959 999 1765673 2007-11-14 14:42 avscale
> -rwxr-xr-x 1 7959 999 7128 2007-11-14 14:23 avw2fsl
> -rwxr-xr-x 1 7959 999 1842738 2007-11-14 14:47 b0calc
> -rwxr-xr-x 1 7959 999 3554 2007-11-14 14:23 bedpost
> -rwxr-xr-x 1 7959 999 7866 2007-11-14 14:23 bedpostx
> -rwxr-xr-x 1 7959 999 1609 2007-08-01 18:10 bedpostx_datacheck
> -rwxr-xr-x 1 7959 999 1907 2007-07-30 12:06 bedpostx_postproc.sh
> -rwxr-xr-x 1 7959 999 469 2007-08-01 18:24 bedpostx_preproc.sh
> -rwxr-xr-x 1 7959 999 592 2007-10-03 13:38
> bedpostx_single_slice.sh
> -rwxr-xr-x 1 7959 999 13346 2007-11-14 14:23 bet
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Bet -> Runtcl
> -rwxr-xr-x 1 7959 999 2612518 2008-01-18 13:00 bet2
> -rwxr-xr-x 1 7959 999 2521689 2007-11-14 14:36 betsurf
> -rwxr-xr-x 1 7959 999 1820942 2007-11-14 14:38 ccops
> -rwxr-xr-x 1 7959 999 2048393 2007-11-14 14:36 cluster
> -rwxr-xr-x 1 7959 999 5859 2007-11-14 14:23 cluster2html
> -rwxr-xr-x 1 7959 999 4484 2007-11-14 14:23 concat_bvars
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 ConcatXFM -> Runtcl
> -rwxr-xr-x 1 7959 999 1757201 2007-11-14 14:37 connectedcomp
> -rwxr-xr-x 1 7959 999 1938351 2007-11-14 14:41 contrast_mgr
> -rwxr-xr-x 1 7959 999 1877077 2007-11-14 14:43 convertwarp
> -rwxr-xr-x 1 7959 999 1770080 2007-11-14 14:42 convert_xfm
> -rwxr-xr-x 1 7959 999 581 2007-07-31 15:04 correctheader
> -rwxr-xr-x 1 7959 999 13504 2007-11-14 14:45 create_lut
> -rwxr-xr-x 1 7959 999 1804705 2007-11-14 14:45 cylsamp
> -rwxr-xr-x 1 7959 999 922 2007-07-19 10:08 design_ttest2
> -rwxr-xr-x 1 7959 999 904417 2007-11-14 14:39 diff_pvm
> -rwxr-xr-x 1 7959 999 1811292 2007-11-14 14:46 distancemap
> -rwxr-xr-x 1 7959 999 1529 2007-07-26 14:00 dof2warp
> drwxr-xr-x 2 7959 999 4096 2007-11-14 14:31 DR
> -rwxr-xr-x 1 7959 999 2588042 2007-11-14 14:33 drawmesh
> -rwxr-xr-x 1 7959 999 1824341 2007-11-14 14:38 dtifit
> -rwxr-xr-x 1 7959 999 4893 2007-11-14 14:23 easythresh
> -rwxr-xr-x 1 7959 999 4075 2007-11-14 14:23 eddy_correct
> -rwxr-xr-x 1 7959 999 1047 2003-09-16 17:52 eqn2gif
> -rwxr-xr-x 1 7959 999 4673 2007-11-14 14:23 estnoise
> -rwxr-xr-x 1 7959 999 5047 2007-11-14 14:24 extractfidparams
> -rwxr-xr-x 1 7959 999 667 2007-07-27 10:59 extracttxt
> -rwxr-xr-x 1 7959 999 1262470 2007-11-14 14:43 fabber
> -rwxr-xr-x 1 7959 999 1613 2007-07-31 16:00 fast
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Fast -> Runtcl
> -rwxr-xr-x 1 7959 999 1706 2007-07-25 11:32 fast1
> -rwxr-xr-x 1 7959 999 1988279 2008-03-20 14:26 fast4
> -rwxr-xr-x 1 7959 999 1152663 2008-03-20 14:12 fast_exe
> -rwxr-xr-x 1 7959 999 1809622 2007-11-14 14:45 fdr
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Fdt -> Runtcl
> -rwxr-xr-x 1 7959 999 30004 2007-11-14 14:23 feat
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Feat -> Runtcl
> -rwxr-xr-x 1 7959 999 1756798 2007-11-14 14:40 feat_model
> -rwxr-xr-x 1 7959 999 16030 2007-11-14 14:23 featquery
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Featquery -> Runtcl
> -rwxr-xr-x 1 7959 999 7548 2007-11-14 14:23 featregapply
> -rwxr-xr-x 1 7959 999 2513483 2007-11-14 14:41 filmbabe
> -rwxr-xr-x 1 7959 999 5512 2007-11-14 14:23 filmbabescript
> -rwxr-xr-x 1 7959 999 1950549 2007-11-14 14:41 film_gls
> -rwxr-xr-x 1 7959 999 1756746 2007-11-14 14:38 find_the_biggest
> -rwxr-xr-x 1 7959 999 3712163 2007-11-14 14:47 first
> -rwxr-xr-x 1 7959 999 5005 2007-11-14 14:23 first_flirt
> -rwxr-xr-x 1 7959 999 5146 2007-11-14 14:23 first_roi_slicesdir
> -rwxr-xr-x 1 7959 999 3712822 2007-11-14 14:47 first_utils
> -rwxr-xr-x 1 7959 999 2032766 2007-11-14 14:41 flame
> -rwxr-xr-x 1 7959 999 2078529 2008-03-20 14:19 flirt
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Flirt -> Runtcl
> -rwxr-xr-x 1 7959 999 4752 2007-11-14 14:24 flirt_average
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 fsl -> Runtcl
> -rwxr-xr-x 1 7959 999 1798784 2007-11-14 14:34 fsl2ascii
> -rwxr-xr-x 1 7959 999 5397 2007-11-14 14:23 fslanimate
> -rwxr-xr-x 1 7959 999 1251523 2007-11-14 14:45 fsl_boxplot
> -rwxr-xr-x 1 7959 999 1806834 2007-11-14 14:34 fslcc
> -rwxr-xr-x 1 7959 999 1843501 2007-11-14 14:36 fslcheck
> -rwxr-xr-x 1 7959 999 4909 2007-11-14 14:23 fslchfiletype
> -rwxr-xr-x 1 7959 999 4496 2008-03-25 10:40 fslchpixdim
> -rwxr-xr-x 1 7959 999 1773432 2007-11-14 14:36 fslcomplex
> -rwxr-xr-x 1 7959 999 261407 2007-11-14 14:34 fslcpgeom
> -rwxr-xr-x 1 7959 999 266907 2007-11-14 14:35 fslcreatehd
> -rwxr-xr-x 1 7959 999 6023 2007-11-14 14:23 fsledithd
> -rwxr-xr-x 1 7959 999 9414 2007-11-14 14:23 fslerrorreport
> -rwxr-xr-x 1 7959 999 1770739 2007-11-14 14:36 fslfft
> -rwxr-xr-x 1 7959 999 1901367 2007-11-14 14:44 fsl_glm
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 fsl_gui -> Runtcl
> -rwxr-xr-x 1 7959 999 269263 2007-11-14 14:34 fslhd
> -rwxr-xr-x 1 7959 999 2331274 2007-11-14 14:45 fsl_histogram
> -rwxr-xr-x 1 7959 999 3628 2007-11-14 14:23 fslinfo
> -rwxr-xr-x 1 7959 999 1804006 2007-11-14 14:34 fslinterleave
> -rwxr-xr-x 1 7959 999 2242655 2008-03-20 14:09 fslmaths
> -rwxr-xr-x 1 7959 999 1802352 2007-11-14 14:36 fslmeants
> -rwxr-xr-x 1 7959 999 1824551 2007-11-14 14:34 fslmerge
> -rwxr-xr-x 1 7959 999 1790613 2007-11-14 14:34 fslnvols
> -rwxr-xr-x 1 7959 999 1833456 2007-11-14 14:34 fslorient
> -rwxr-xr-x 1 7959 999 10815 2007-11-14 14:24 fslpres
> -rwxr-xr-x 1 7959 999 1765478 2007-11-14 14:34 fslpspec
> -rwxr-xr-x 1 7959 999 1889243 2007-11-14 14:44 fsl_regfilt
> -rwxr-xr-x 1 7959 999 1812261 2007-11-14 14:34 fslroi
> -rwxr-xr-x 1 7959 999 3558 2007-11-14 14:23 fslsize
> -rwxr-xr-x 1 7959 999 1816369 2007-11-14 14:36 fslslice
> -rwxr-xr-x 1 7959 999 1816359 2007-11-14 14:34 fslsplit
> -rwxr-xr-x 1 7959 999 1787113 2007-11-15 12:29 fslstats
> -rwxr-xr-x 1 7959 999 13050 2007-11-14 14:24 fsl_sub
> -rwxr-xr-x 1 7959 999 1816718 2007-11-14 14:36 fslswapdim
> -rwxr-xr-x 1 7959 999 446 2007-07-19 16:48 fsltclsh
> -rwxr-xr-x 1 7959 999 1256714 2007-11-14 14:45 fsl_tsplot
> -rwxr-xr-x 1 7959 999 3833 2007-11-14 14:23 fslval
> -rwxr-xr-x 1 7959 999 4453 2007-11-14 14:24 fslvbm_1_bet
> -rwxr-xr-x 1 7959 999 6215 2007-11-14 14:24 fslvbm_2_template
> -rwxr-xr-x 1 7959 999 5645 2007-11-14 14:24 fslvbm_3_proc
> -rwxr-xr-x 1 7959 999 117 2007-11-14 16:06 fslview
> -rwxr-xr-x 1 7959 999 4294991 2007-11-14 16:06 fslview_bin
> -rwxr-xr-x 1 7959 999 446 2007-07-19 16:47 fslwish
> -rwxr-xr-x 1 7959 999 1942385 2007-11-14 14:41 ftoz
> -rwxr-xr-x 1 7959 999 1913975 2007-11-14 14:43 fugue
> -rwxr-xr-x 1 7959 999 5424 2007-11-14 14:24 generate_b0
> -rwxr-xr-x 1 7959 999 4521 2007-11-14 14:24 generate_brain
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Glm -> Runtcl
> -rwxr-xr-x 1 7959 999 1819468 2007-11-14 14:46 groupttest
> -rwxr-xr-x 1 7959 999 1285091 2007-11-14 14:41 halfcosbasis
> -rwxr-xr-x 1 7959 999 8373 2007-11-14 14:44 hist2prob
> -rwxr-xr-x 1 7959 999 5323 2007-11-14 14:24 imcp
> -rwxr-xr-x 1 7959 999 1768194 2007-11-14 14:42 img2imgcoord
> -rwxr-xr-x 1 7959 999 1768642 2007-11-14 14:42 img2stdcoord
> -rwxr-xr-x 1 7959 999 4469 2007-11-14 14:24 imglob
> -rwxr-xr-x 1 7959 999 4274 2007-11-14 14:24 imln
> -rwxr-xr-x 1 7959 999 5269 2007-11-14 14:24 immv
> -rwxr-xr-x 1 7959 999 3805 2007-11-14 14:24 imrm
> -rwxr-xr-x 1 7959 999 4364 2007-11-14 14:24 imtest
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 InvertXFM -> Runtcl
> -rwxr-xr-x 1 7959 999 1959268 2007-11-14 14:43 invwarp
> -rwxr-xr-x 1 7959 999 1764935 2007-11-14 14:39 make_dyadic_vectors
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Make_flobs -> Runtcl
> -rwxr-xr-x 1 7959 999 1160 2003-02-21 16:48 makehtmeqns
> -rwxr-xr-x 1 7959 999 1794844 2007-11-14 14:42 makerot
> -rwxr-xr-x 1 7959 999 3732 2007-11-14 14:23 maskdyads
> -rwxr-xr-x 1 7959 999 227 2007-07-23 17:16 mccutup
> -rwxr-xr-x 1 7959 999 1952344 2007-11-14 14:43 mcflirt
> -rwxr-xr-x 1 7959 999 895646 2007-11-14 14:34 mean
> -rwxr-xr-x 1 7959 999 1756573 2007-11-14 14:38 medianfilter
> -rwxr-xr-x 1 7959 999 2828048 2007-11-14 14:44 melodic
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Melodic -> Runtcl
> -rwxr-xr-x 1 7959 999 1550 2007-07-27 07:56 mfast
> -rwxr-xr-x 1 7959 999 1163965 2007-11-14 14:38 mfast_exe
> -rwxr-xr-x 1 7959 999 725081 2007-11-14 14:42 midtrans
> -rwxr-xr-x 1 7959 999 2621989 2007-11-14 14:45 mm
> -rwxr-xr-x 1 7959 999 8470 2007-11-14 14:44 morph_kernel
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Nudge -> Runtcl
> -rwxr-xr-x 1 7959 999 4266 2007-11-14 14:23 old_betall
> -rwxr-xr-x 1 7959 999 2083537 2007-11-14 14:45 overlay
> -rwxr-xr-x 1 7959 999 4358 2007-11-14 14:24 pairreg
> -rwxr-xr-x 1 7959 999 5788 2007-11-14 14:23 perfusion_subtract
> -rwxr-xr-x 1 7959 999 356284 2007-11-14 14:45 pngappend
> -rwxr-xr-x 1 7959 999 1794825 2007-11-14 14:42 pointflirt
> -rwxr-xr-x 1 7959 999 1994053 2007-11-14 14:47 possum
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Possum -> Runtcl
> -rwxr-xr-x 1 7959 999 720125 2007-11-14 14:47 possum_sum
> -rwxr-xr-x 1 7959 999 7648 2007-11-14 14:24 possumX
> -rwxr-xr-x 1 7959 999 2040 2008-01-21 16:40 possumX_postproc.sh
> -rwxr-xr-x 1 7959 999 1867669 2007-11-14 14:43 prelude
> -rwxr-xr-x 1 7959 999 1774281 2007-11-14 14:40 prewhiten
> -rwxr-xr-x 1 7959 999 3520 2007-11-14 14:23 probtrack
> -rwxr-xr-x 1 7959 999 2538317 2007-11-14 14:39 probtrackx
> -rwxr-xr-x 1 7959 999 1761004 2007-11-14 14:39 proj_thresh
> -rwxr-xr-x 1 7959 999 11861 2007-11-14 14:44 ptoz
> -rwxr-xr-x 1 7959 999 1850641 2007-11-14 14:47 pulse
> -rwxr-xr-x 1 7959 999 1886073 2007-11-14 14:45 randomise
> -rwxr-xr-x 1 7959 999 4137 2007-11-14 14:24 remove_ext
> -rwxr-xr-x 1 7959 999 5221 2007-11-14 14:23 renderhighres
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Renderhighres ->
> Runtcl
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Renderstats -> Runtcl
> -rwxr-xr-x 1 7959 999 1756659 2007-11-14 14:42 rmsdiff
> -rwxr-xr-x 1 7959 999 5513 2007-11-14 14:23 run_first
> -rwxr-xr-x 1 7959 999 5900 2008-03-20 13:53 run_first_all
> -rwxr-xr-x 1 7959 999 5369 2007-11-14 14:24 runfsl
> -rwxr-xr-x 1 7959 999 1105 2007-07-19 17:12 Runtcl
> -rwxr-xr-x 1 7959 999 680217 2007-11-14 14:33 selfintersection
> -rwxr-xr-x 1 7959 999 20428 2007-11-14 14:24 siena
> -rwxr-xr-x 1 7959 999 6045 2007-11-14 14:24 siena_cal
> -rwxr-xr-x 1 7959 999 1805431 2007-11-14 14:45 siena_diff
> -rwxr-xr-x 1 7959 999 6493 2007-11-14 14:24 siena_flirt
> -rwxr-xr-x 1 7959 999 6092 2007-11-14 14:24 siena_flow2std
> -rwxr-xr-x 1 7959 999 18759 2007-11-14 14:24 sienax
> -rwxr-xr-x 1 7959 999 1871936 2007-11-14 14:43 sigloss
> -rwxr-xr-x 1 7959 999 1818051 2007-11-14 14:47 signal2image
> -rwxr-xr-x 1 7959 999 4267 2007-11-14 14:23 sliceanimate
> -rwxr-xr-x 1 7959 999 2065659 2007-11-14 14:44 slicer
> -rwxr-xr-x 1 7959 999 5836 2007-11-14 14:24 slices
> -rwxr-xr-x 1 7959 999 5591 2007-11-14 14:24 slicesdir
> -rwxr-xr-x 1 7959 999 4325 2007-11-14 14:24 slicesmask
> -rwxr-xr-x 1 7959 999 1804609 2007-11-14 14:46 slicetimer
> -rwxr-xr-x 1 7959 999 1812789 2007-11-14 14:36 smoothest
> -rwxr-xr-x 1 7959 999 1801501 2007-11-14 14:47 spharm_rm
> -rwxr-xr-x 1 7959 999 8514 2007-11-14 14:24 standard_space_roi
> -rwxr-xr-x 1 7959 999 1768738 2007-11-14 14:42 std2imgcoord
> -rwxr-xr-x 1 7959 999 1805905 2007-11-14 14:45 surface_norm
> -rwxr-xr-x 1 7959 999 1870589 2007-11-14 14:46 susan
> lrwxrwxrwx 1 7959 999 6 2008-07-01 12:22 Susan -> Runtcl
> -rwxr-xr-x 1 7959 999 739424 2007-11-14 14:47 systemnoise
> -rwxr-xr-x 1 7959 999 5054 2007-11-14 14:24 tbss_1_preproc
> -rwxr-xr-x 1 7959 999 5063 2007-11-14 14:24 tbss_2_reg
> -rwxr-xr-x 1 7959 999 7026 2007-11-14 14:24 tbss_3_postreg
> -rwxr-xr-x 1 7959 999 4552 2007-11-14 14:24 tbss_4_prestats
> -rwxr-xr-x 1 7959 999 6626 2007-11-14 14:24 tbss_deproject
> -rwxr-xr-x 1 7959 999 4990 2007-11-14 14:24 tbss_fill
> -rwxr-xr-x 1 7959 999 4998 2007-11-14 14:24 tbss_non_FA
> -rwxr-xr-x 1 7959 999 5491 2007-11-14 14:24 tbss_reg
> -rwxr-xr-x 1 7959 999 1829012 2007-11-14 14:46 tbss_skeleton
> -rwxr-xr-x 1 7959 999 6995 2007-11-14 14:44 tmpnam
> -rwxr-xr-x 1 7959 999 2342360 2007-11-14 14:40 tsplot
> -rwxr-xr-x 1 7959 999 1940340 2007-11-14 14:41 ttologp
> -rwxr-xr-x 1 7959 999 1942385 2007-11-14 14:41 ttoz
> -rwxr-xr-x 1 7959 999 1760681 2007-11-14 14:45 unconfound
> -rwxr-xr-x 1 7959 999 6101 2007-11-14 14:23 updatefeatreg
> -rwxr-xr-x 1 7959 999 1818525 2007-11-14 14:39 vecreg
> -rwxr-xr-x 1 7959 999 1783143 2007-11-14 14:43 vmapper
> -rwxr-xr-x 1 7959 999 29406 2007-11-14 14:44 whirlgif
> -rwxr-xr-x 1 7959 999 186399 2007-11-14 14:45 wpng
> -rwxr-xr-x 1 7959 999 1896961 2007-11-14 14:39 xfibres
> -rwxr-xr-x 1 7959 999 3776 2007-11-14 14:23 zeropad
> -rwxr-xr-x 1 7959 999 12486 2007-11-14 14:44 ztop
>
>
> ________________________________________
> From: FSL - FMRIB's Software Library [[log in to unmask]] On Behalf
> Of Matthew Webster [[log in to unmask]]
> Sent: Tuesday, July 01, 2008 3:28 PM
> To: [log in to unmask]
> Subject: Re: [FSL] FSL installation on FSL_vm5_32
>
> This message usually means that the binary does not match the OS.
> Can you send me the results of the following ( in a terminal)
>
> echo $FSLMACHTYPE
>
> ls -al /usr/local/fsl/bin
>
> Regards
>
> Matthew
>> This is what I get if I do that:
>>
>> emma@clinicalneuro-desktop:~$ Melodic
>> /usr/local/fsl/bin/fslwish: line 17: /usr/local/fsl/extras/bin/
>> fslwish8.4: cannot execute binary file
>> /usr/local/fsl/bin/fslwish: line 17: /usr/local/fsl/extras/bin/
>> fslwish8.4: Success
>>
>> Any suggestions?
>>
>> Emma
>> ________________________________________
>> From: FSL - FMRIB's Software Library [[log in to unmask]] On Behalf
>> Of Matthew Webster [[log in to unmask]]
>> Sent: Tuesday, July 01, 2008 3:15 PM
>> To: [log in to unmask]
>> Subject: Re: [FSL] FSL installation on FSL_vm5_32
>>
>> Hi,
>> If the install script has completed successfully you should be
>> able to open a terminal and type (.e.g)
>>
>> Flirt
>>
>> to bring up a GUI. It shouldn't matter which directory you are in...
>>
>> Matthew
>>> Hi again,
>>>
>>> I was having a look on the website on the installation/running
>>> section. It writes this:
>>>
>>> "To run the FSL tools from the command line, you can find the tools
>>> in $FSLDIR/bin. In general command-line programs are lower case
>>> (e.g. 'bet'). In general the GUI version is capitalised (e.g.
>>> 'Bet'), except on Mac, where '_gui' is appended because those file
>>> systems can't tell the difference between upper and lower case (e.g.
>>> 'Bet_gui').
>>>
>>> To bring up a simple GUI which is just a menu of the main individual
>>> FSL GUI tools, just type fsl."
>>>
>>> I want to be able to use a GUI, but where do i type fsl to bring up
>>> this list of tools, and if it's in the terminal, what directory do I
>>> need to be in?
>>>
>>> Sorry to keep asking so many questions
>>>
>>> Emma
>>> ________________________________________
>>> From: FSL - FMRIB's Software Library [[log in to unmask]] On Behalf
>>> Of Matthew Webster [[log in to unmask]]
>>> Sent: Tuesday, July 01, 2008 2:07 PM
>>> To: [log in to unmask]
>>> Subject: Re: [FSL] FSL installation on FSL_vm5_32
>>>
>>> Hi,
>>> Is your PATH variable set up correctly - does it contain /usr/
>>> local/fsl/bin? what happens if you run /usr/local/fsl/bin/melodic?
>>> Do
>>> any of the GUI's launch ( e.g. Feat Flirt etc)?
>>>
>>> Matthew
>>>
>>>> Dear Matthew,
>>>>
>>>> The usr/local/fsl folder contains all fsl files and subdirectories
>>>> (as far
>>>> as I know)
>>>> I tried your commands (for bash), but nothing appeared to happen. I
>>>> believe
>>>> I'd tried that before, as that is also a suggestion somewhere on
>>>> the
>>>> website.
>>>>
>>>> Emma
>>>>
>>>
>>
>
